Gene
RNA
| Item | Value |
|---|---|
| gene id | G161313 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035914.1 |
| NCBI id | CM008317.1 |
| chromosome length | 41377133 |
| location | 28889370 ~ 28890244 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU218582 | True | 875 | lncRNA | 0.39 | 1 | 28889370 | 28890244 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| arid3b | LOC108439030,LOC108264089 | coding | upstream | 30274 | 28768606 ~ 28859096 (+) |
| dhx36 | dhx36 | coding | upstream | 502953 | 28300719 ~ 28386417 (+) |
| gpr149 | gpr149 | coding | upstream | 606052 | 28255972 ~ 28283318 (+) |
| LOC111194790 | LOC108434085,LOC108264118,LOC108434032 | coding | upstream | 693656 | 28185750 ~ 28195714 (+) |
| LOC103044051 | LOC108434085,LOC108264118,LOC108434032 | coding | upstream | 704463 | 28180682 ~ 28184907 (+) |
| LOC103037946 | LOC108439022 | coding | downstream | 64473 | 28954717 ~ 28969395 (+) |
| LOC103022881 | LOC108439021 | coding | downstream | 127816 | 29018060 ~ 29063139 (+) |
| LOC103023184 | NA | coding | downstream | 243384 | 29133628 ~ 29143190 (+) |
| LOC103038575 | LOC108439020 | coding | downstream | 262052 | 29152296 ~ 29159185 (+) |
| LOC111194800 | NA | coding | downstream | 309205 | 29199449 ~ 29200211 (+) |
| G161312 | NA | non-coding | upstream | 244 | 28886972 ~ 28889126 (+) |
| G161314 | NA | non-coding | upstream | 2570 | 28886442 ~ 28886800 (+) |
| G161302 | NA | non-coding | upstream | 125327 | 28668173 ~ 28764043 (+) |
| LOC111194802 | NA | non-coding | upstream | 237061 | 28643321 ~ 28652309 (+) |
| G161243 | NA | non-coding | upstream | 495342 | 28366168 ~ 28394028 (+) |
| G161414 | NA | non-coding | downstream | 312109 | 29202353 ~ 29202589 (+) |
| G161417 | NA | non-coding | downstream | 317719 | 29207963 ~ 29208290 (+) |
| LOC111194801 | NA | non-coding | downstream | 320020 | 29210264 ~ 29214735 (+) |
| G161425 | NA | non-coding | downstream | 442867 | 29333111 ~ 29354291 (+) |
| G161476 | NA | non-coding | downstream | 593270 | 29483514 ~ 29490820 (+) |
| fam219b | fam219b | other | upstream | 130363 | 28745696 ~ 28759007 (+) |
| G161292 | rap2b,LOC107757383 | other | upstream | 264585 | 28622128 ~ 28624785 (+) |
| c18h3orf33 | NA | other | upstream | 1092866 | 27784896 ~ 27796504 (+) |
| ccnl1 | ccnl1,LOC107684610,LOC107557837,LOC107710830 | other | upstream | 1770106 | 27109671 ~ 27119264 (+) |
| G160919 | ptx3 | other | upstream | 1981743 | 26905244 ~ 26907627 (+) |
| G161331 | NA | other | downstream | 180576 | 29070820 ~ 29116795 (+) |
| LOC103042463 | tmod3,LOC108440576,LOC108264495 | other | downstream | 1463442 | 30353686 ~ 30414212 (+) |
| dhdds | dhdds,LOC106582847,LOC106605152 | other | downstream | 1964314 | 30854558 ~ 30894506 (+) |
| hmgn2 | NA | other | downstream | 1984794 | 30875038 ~ 30878327 (+) |
| efhb | NA | other | downstream | 2694502 | 31584746 ~ 31605490 (+) |
