G161476


Basic Information

Item Value
gene id G161476
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 29483514 ~ 29490820 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU218780
aaaagatgcagagctttcagacctcaaataatgcaaagaaaacaagttcatattcaaattaatatttggtggaataaccctggttttaaatcacagttttcatgcatcttggcatcatgttttcctccaccagtcttacacactgcttttggataacgttatgcagTGAATAACGTTGGATAaggttcaagcagttcagcttggtttgatggtttgtgatcatccatcttcctcttgattatattcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU218780 True 247 lncRNA 0.36 2 29483514 29490820

Neighbor

gene id symbol gene type direction distance location
LOC103023825 tarsl2,LOC108413626 coding upstream 9833 29449150 ~ 29473681 (+)
LOC103039409 NA coding upstream 81933 29398412 ~ 29401581 (+)
LOC103039106 cplx3b,cplx3,cplx3a,LOC108439029,LOC103033419,LOC108264002,LOC107753702,LOC107665490 coding upstream 91548 29371065 ~ 29391966 (+)
csk csk,LOC108264088,LOC106562350 coding upstream 175601 29219466 ~ 29307913 (+)
LOC111194800 NA coding upstream 283303 29199449 ~ 29200211 (+)
lrrc49 lrrc49 coding downstream 30957 29521777 ~ 29598907 (+)
thsd4 thsd4 coding downstream 115237 29606057 ~ 29715602 (+)
LOC111194806 NA coding downstream 238530 29729350 ~ 29734672 (+)
LOC111194842 NA coding downstream 250241 29741061 ~ 29743027 (+)
LOC107196975 NA coding downstream 384954 29875774 ~ 29884606 (+)
G161425 NA non-coding upstream 129223 29333111 ~ 29354291 (+)
LOC111194801 NA non-coding upstream 268779 29210264 ~ 29214735 (+)
G161417 NA non-coding upstream 275224 29207963 ~ 29208290 (+)
G161414 NA non-coding upstream 280925 29202353 ~ 29202589 (+)
G161313 NA non-coding upstream 593270 28889370 ~ 28890244 (+)
G161484 NA non-coding downstream 11300 29502120 ~ 29532246 (+)
G161502 NA non-coding downstream 129577 29620397 ~ 29639626 (+)
G161503 NA non-coding downstream 134203 29625023 ~ 29646905 (+)
G161508 NA non-coding downstream 165870 29656690 ~ 29657488 (+)
G161511 NA non-coding downstream 233074 29723894 ~ 29724121 (+)
G161331 NA other upstream 366719 29070820 ~ 29116795 (+)
fam219b fam219b other upstream 724507 28745696 ~ 28759007 (+)
G161292 rap2b,LOC107757383 other upstream 858729 28622128 ~ 28624785 (+)
c18h3orf33 NA other upstream 1687010 27784896 ~ 27796504 (+)
ccnl1 ccnl1,LOC107684610,LOC107557837,LOC107710830 other upstream 2364250 27109671 ~ 27119264 (+)
LOC103042463 tmod3,LOC108440576,LOC108264495 other downstream 862866 30353686 ~ 30414212 (+)
dhdds dhdds,LOC106582847,LOC106605152 other downstream 1363738 30854558 ~ 30894506 (+)
hmgn2 NA other downstream 1384218 30875038 ~ 30878327 (+)
efhb NA other downstream 2093926 31584746 ~ 31605490 (+)
G162017 NA other downstream 2578042 32068862 ~ 32148190 (+)

Expression


Co-expression Network