Gene
RNA
| Item | Value |
|---|---|
| gene id | G161808 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035914.1 |
| NCBI id | CM008317.1 |
| chromosome length | 41377133 |
| location | 31099568 ~ 31190249 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU219217 | True | 500 | lncRNA | 0.38 | 2 | 31099568 | 31190249 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC103039032 | NA | coding | upstream | 115708 | 30971172 ~ 30983860 (+) |
| LOC111194808 | LOC102215143 | coding | upstream | 299344 | 30798138 ~ 30800224 (+) |
| LOC111194807 | NA | coding | upstream | 427299 | 30661882 ~ 30672269 (+) |
| lysmd2 | lysmd2 | coding | upstream | 657692 | 30431447 ~ 30441876 (+) |
| LOC103035823 | bcl2l10 | coding | upstream | 996591 | 30090299 ~ 30102977 (+) |
| znf385d | znf385d,LOC107688204 | coding | downstream | 190968 | 31381217 ~ 31514641 (+) |
| satb1 | satb1,LOC107569796 | coding | downstream | 497803 | 31688052 ~ 31802563 (+) |
| LOC107196951 | NA | coding | downstream | 1186852 | 32377101 ~ 32565890 (+) |
| LOC103041596 | LOC108439295 | coding | downstream | 1491493 | 32681742 ~ 32701604 (+) |
| LOC103041297 | LOC103041297 | coding | downstream | 1530995 | 32721244 ~ 32729851 (+) |
| G161797 | LOC108426366,LOC108256083,LOC107552531,LOC107688188,LOC107707635,LOC107726719,LOC107671482 | non-coding | upstream | 63886 | 31027988 ~ 31035682 (+) |
| LOC103039351 | NA | non-coding | upstream | 184318 | 30890333 ~ 30915250 (+) |
| G161775 | NA | non-coding | upstream | 253538 | 30845730 ~ 30846030 (+) |
| G161763 | NA | non-coding | upstream | 302741 | 30759344 ~ 30796827 (+) |
| G161754 | NA | non-coding | upstream | 402845 | 30695539 ~ 30696723 (+) |
| G161816 | NA | non-coding | downstream | 2032 | 31192281 ~ 31199747 (+) |
| G161818 | NA | non-coding | downstream | 29089 | 31219338 ~ 31220183 (+) |
| G161826 | NA | non-coding | downstream | 55832 | 31246081 ~ 31246877 (+) |
| G161831 | NA | non-coding | downstream | 121282 | 31311531 ~ 31311803 (+) |
| G161834 | NA | non-coding | downstream | 182728 | 31372977 ~ 31528197 (+) |
| dhdds | dhdds,LOC106582847,LOC106605152 | other | upstream | 205062 | 30854558 ~ 30894506 (+) |
| hmgn2 | NA | other | upstream | 221241 | 30875038 ~ 30878327 (+) |
| LOC103042463 | tmod3,LOC108440576,LOC108264495 | other | upstream | 685356 | 30353686 ~ 30414212 (+) |
| G161331 | NA | other | upstream | 1982773 | 29070820 ~ 29116795 (+) |
| fam219b | fam219b | other | upstream | 2340561 | 28745696 ~ 28759007 (+) |
| efhb | NA | other | downstream | 394497 | 31584746 ~ 31605490 (+) |
| G162017 | NA | other | downstream | 878613 | 32068862 ~ 32148190 (+) |
| G162032 | NA | other | downstream | 1046067 | 32236316 ~ 32295029 (+) |
| G162096 | LOC103040777,LOC108439298,LOC108256343,LOC101172525 | other | downstream | 1523934 | 32714183 ~ 32719275 (+) |
| ss18l2 | ss18l2,kiaa0355 | other | downstream | 4617616 | 35807865 ~ 35814793 (+) |
