CI01000012_10799203_10801485


Basic Information

Item Value
gene id CI01000012_10799203_10801485
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 10798778 ~ 10801537 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_10799203_10801485.mRNA
AGTTGTTAACATTCATAATGTTATTAATAAAAAGAGTGACTTACACAAAGGCATGGTAAATGAATGCCCAGGCTCGCGGTCGCTCCAGGACATTGTAGAGGTAGTTCTGGAGCTTCCTGTAGCGCGCGTTTCTCCGGCCGCTTTGCGCGCTGTAGGCGAGCGGTTTTCCCAGCAGGCTCAGCCGGGCGCCCTGCTTTCTCCTCTGGTTCTCCGAGCCTCCTGCACCTGTTGTGCCCGGCGCCGACAGCAAACTGTCGACCGTCCTGGTCGCGTTGTTCATCGTCCCACGACCGGCTTCAACATCTTTCATGCCATAGTGCTGCGAGGTCTTCATCCAGAGACCAGTACCGCCCTCATCGCCGCTGTGGTTGCGGGGCATCGCATCACCAGCGCAGGCTGGAAACGCGCGTCTGGCACCAGCGCTGACGATGTCCTCCAAAAATGTACTGCGATAAAGTTAATCAAGCTTGGGGGATCTCTCTGTCACAAACATTTAACACCCCTGTGCCCCCATCATCTTGAATCGACTTACAAAAGTGATGTGTATGAATTAACTACAATAGTTTTCTACTTACTGTGGTGGCAGAACAGATTCTCCTCAATAGACACTTTATATAGACACCAACCAACAAGACTTAGGCTCATAACTGAGTCTTTCTGGGTTCCTAAACGGGGCTCAATTGAAATCGCTTCAGTCTGATCCGGTAATCACGGAGCCCACAGAACTAGCGGAGCCGCTGCCAGACAAACCACGTGATCTGAAAAGAAATAAGCCGGTAAGCGGTATACAGTTGAATTAGCAAGTAAACTGTTCATATTTCAATGATGTGAACGATATTTTATTGCATTCTACATATTTGTATATAACTATTTTTTTATTTTATATTCTACCTGGTAGCCTATATAATGTTAGTGTTTTCTTCATCATTCAACAGAGGGAAGCAGGGGAAGTTGGTGCACTATGAGTGCTCTTTTACACTTGTCTCTCTATCACAAGTTTTATTCTTTTAATATTATCAGTTTTATGCTTATTAGGTTGCCCTGTTAGACTCTATTTCCCCCCACTATTTTTTCATTATGCATGGCTAATTCAAATACTTTGGCTTAAAAAAAAATCACATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_10799203_10801485.mRNA True 1125 mRNA 0.45 2 10798778 10801537

Neighbor

gene id symbol gene type direction distance location
CI01000012_10705713_10710443 ASRGL1 coding downstream 88335 10705713 ~ 10710443 (-)
CI01000012_10696109_10703071 NA coding downstream 95592 10687849 ~ 10703186 (-)
CI01000012_10639383_10640319 NA coding downstream 157930 10639161 ~ 10640848 (-)
CI01000012_10626417_10638842 B3GAT2 coding downstream 159815 10625889 ~ 10638963 (-)
CI01000012_10395715_10408849 SLC2A15A coding downstream 389929 10395628 ~ 10408849 (-)
CI01000012_10837437_10841732 NA coding upstream 35878 10837415 ~ 10841804 (-)
CI01000012_10934571_10937915 NA coding upstream 132962 10934499 ~ 10937915 (-)
CI01000012_10939589_10944243 EEF1A1B, EEF1A1, EEF1A1A, EEF1A1.L, EF1A1 coding upstream 137418 10938955 ~ 10944243 (-)
CI01000012_10947838_10952009 SLC17A5 coding upstream 146301 10947838 ~ 10952009 (-)
CI01000012_10958668_10973745 RIN2 coding upstream 156797 10958334 ~ 10973745 (-)
G75814 NA non-coding downstream 2124 10796420 ~ 10796654 (-)
G75607 NA non-coding downstream 7569 10764163 ~ 10791209 (-)
G75796 NA non-coding downstream 34698 10714098 ~ 10764080 (-)
G75751 NA non-coding downstream 247558 10550070 ~ 10551220 (-)
G75875 NA non-coding upstream 118684 10920221 ~ 10922346 (-)
G75892 NA non-coding upstream 121185 10922722 ~ 10927672 (-)
G75931 NA non-coding upstream 317983 11119520 ~ 11119825 (-)
G75932 NA non-coding upstream 318406 11119943 ~ 11121104 (-)
G75933 NA non-coding upstream 319767 11121304 ~ 11121901 (-)
G75608 NA other downstream 177907 10611915 ~ 10620871 (-)
G74982 NA other downstream 1222806 9575648 ~ 9576149 (-)
CI01000012_09400481_09401810 EIF4EBP2 other downstream 1396810 9398076 ~ 9402378 (-)
CI01000012_09082056_09083285 NA other downstream 1715289 9081877 ~ 9083489 (-)
CI01000012_09071892_09073410 NA other downstream 1725321 9071371 ~ 9073457 (-)
CI01000012_12047175_12052116 NA other upstream 1247507 12046728 ~ 12052541 (-)
CI01000012_12079581_12084139 NA other upstream 1277399 12078936 ~ 12084260 (-)
CI01000012_12954694_12954954 SF3B5, BRAFLDRAFT_284483 other upstream 2152909 12954446 ~ 12957833 (-)
G77287 NA other upstream 2817739 13619276 ~ 13633819 (-)

Expression


Co-expression Network