G162032


Basic Information

Item Value
gene id G162032
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 32236316 ~ 32295029 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU219521
agagctgctttgtgcagtggtcagactctaccatcatcaatgctgctgcaagatcttggtgaaaaattaattaattaatgcaacaCTGGATTAAACCTGAAAACACTGCTACTCCGGCAGCACTTTCAAATAATTATTCCTTTACCCATACTTCTCGTCTCtcaggacgaggaggtggaacTGGCCTATTGCTCGCGAATGGCTTAAAATACACTCCACTATTACCTGCAAACTCATACAACTCGTTCgagtatcatgccacactggttaatactccaTCAAAACTTACTGTCGTTGTCATCTaccgtcctcctggacaaatgggcgaGTTCACACATgaacttgacatgctactgtcttctatccccGAGCAAGATTGCcccatgctcattctaggggatatgaacatccaTCATGACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU219521 True 421 TUCP 0.44 2 32236316 32295029

Neighbor

gene id symbol gene type direction distance location
satb1 satb1,LOC107569796 coding upstream 433753 31688052 ~ 31802563 (+)
znf385d znf385d,LOC107688204 coding upstream 721675 31381217 ~ 31514641 (+)
slc9a1 slc9a1,LOC108256597,LOC107688187,LOC107671463,LOC107552533,LOC107564092 coding upstream 981008 31164038 ~ 31255308 (+)
LOC103039032 NA coding upstream 1252456 30971172 ~ 30983860 (+)
LOC111194808 LOC102215143 coding upstream 1436092 30798138 ~ 30800224 (+)
LOC107196951 NA coding downstream 82072 32377101 ~ 32565890 (+)
LOC103041596 LOC108439295 coding downstream 386713 32681742 ~ 32701604 (+)
LOC103041297 LOC103041297 coding downstream 426215 32721244 ~ 32729851 (+)
LOC103040053 LOC103040053,LOC108412368,LOC105891959,LOC108256617,LOC101464589,LOC102196503 coding downstream 487045 32782074 ~ 32879256 (+)
LOC103039334 LOC108412369,LOC107726662,LOC107671466,LOC107711537,LOC107592120,LOC107592485 coding downstream 610625 32905654 ~ 32915649 (+)
G162028 NA non-coding upstream 10821 32225004 ~ 32225495 (+)
G162025 NA non-coding upstream 41330 32194699 ~ 32194986 (+)
G162014 NA non-coding upstream 145292 32088343 ~ 32091024 (+)
G162003 NA non-coding upstream 364039 31872023 ~ 31872277 (+)
G162001 NA non-coding upstream 399644 31836226 ~ 31836672 (+)
G162036 NA non-coding downstream 27855 32322884 ~ 32368130 (+)
G162052 NA non-coding downstream 35160 32330189 ~ 32333504 (+)
G162054 NA non-coding downstream 39478 32334507 ~ 32335028 (+)
G162044 NA non-coding downstream 275523 32570552 ~ 32576305 (+)
G162043 NA non-coding downstream 282241 32577270 ~ 32579768 (+)
G162017 NA other upstream 88126 32068862 ~ 32148190 (+)
efhb NA other upstream 630826 31584746 ~ 31605490 (+)
dhdds dhdds,LOC106582847,LOC106605152 other upstream 1341810 30854558 ~ 30894506 (+)
hmgn2 NA other upstream 1357989 30875038 ~ 30878327 (+)
LOC103042463 tmod3,LOC108440576,LOC108264495 other upstream 1822104 30353686 ~ 30414212 (+)
G162096 LOC103040777,LOC108439298,LOC108256343,LOC101172525 other downstream 419154 32714183 ~ 32719275 (+)
ss18l2 ss18l2,kiaa0355 other downstream 3512836 35807865 ~ 35814793 (+)
pygo1 pygo1 other downstream 3817013 36112042 ~ 36120402 (+)
ccpg1 ccpg1 other downstream 3837386 36132415 ~ 36169745 (+)
G162964 LOC108431875,LOC108413582 other downstream 4459156 36754185 ~ 36754687 (+)

Expression


Co-expression Network