CI01000012_11011437_11013922


Basic Information

Item Value
gene id CI01000012_11011437_11013922
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 11011364 ~ 11013931 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_11011437_11013922.mRNA
GTATAAAACACAGAGCAATGCACACGTGTCTCAGAGAGTCTTCCCTCTCATTATACACCATGTAATTTAGAATATGGATCACTCCAGAGGAAAAATAGTAAATGCTTTCAATCACAGACTAATTATACACATTCATTACTGCTGCTCCCAGTCCATCGCTGCTCTGTTAACAAGCTATTCACTGACACAGCGTGTCACCCGGCCGGTTCCATTGATAAGCCTGCAGCCTGCCGACAGAATCGGGTCAGTGAGAGTGGCCACTTATTTGCCTGGATTCAGTTTTACACGCTCTAAGATGATGAATAAAAAGCTGGACCGTGAGCGAGCTGCCTATTTTTATCCCAAGAACAACAGATCTGCTCTGGTGCTCATGGTTCACATGGGTTTCATTGTTGGTGTGGCCTTCATTAGAGAGTCACAGCCTCTCGGTTCTGGTCCCATCACAGAGCGTTCCCTGGCACAAGAGATTCTGATTAATCTAATTTCAATTACAGCGCCAATGAATAAAGCAGCAATAAACAATAGCCAGTTAGCATGAGTGGATCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_11011437_11013922.mRNA True 547 mRNA 0.44 3 11011364 11013931

Neighbor

gene id symbol gene type direction distance location
CI01000012_10922409_10930704 DDX43 coding upstream 80079 10922409 ~ 10931285 (+)
CI01000012_10892631_10918617 KCNQ5 coding upstream 92747 10892631 ~ 10918617 (+)
CI01000012_10852509_10860759 NA coding upstream 150496 10849984 ~ 10860868 (+)
CI01000012_10714254_10788932 NA coding upstream 222432 10714254 ~ 10788932 (+)
CI01000012_10661067_10678624 OGFRL1 coding upstream 331948 10660689 ~ 10679416 (+)
CI01000012_11043669_11044569 NA coding downstream 29696 11043394 ~ 11044670 (+)
CI01000012_11091957_11093675 CCDC85A coding downstream 78026 11091957 ~ 11093774 (+)
CI01000012_11277561_11292490 VRK2 coding downstream 263630 11277561 ~ 11292636 (+)
CI01000012_11319849_11326035 NA coding downstream 305129 11319060 ~ 11326904 (+)
CI01000012_11616967_11694276 NA coding downstream 601616 11615547 ~ 11694284 (+)
G75404 NA non-coding upstream 63878 10943450 ~ 10947486 (+)
G75398 NA non-coding upstream 68528 10938897 ~ 10942836 (+)
G75407 NA non-coding upstream 89023 10920216 ~ 10922341 (+)
G75477 NA non-coding upstream 214710 10796419 ~ 10796654 (+)
G75474 NA non-coding upstream 306992 10704151 ~ 10704372 (+)
G75552 NA non-coding downstream 119437 11133368 ~ 11133689 (+)
G75554 NA non-coding downstream 121442 11135373 ~ 11135605 (+)
G75563 NA non-coding downstream 138128 11152059 ~ 11152384 (+)
G75566 NA non-coding downstream 140840 11154771 ~ 11155058 (+)
CI01000012_10223957_10235955 NA other upstream 787077 10223697 ~ 10236276 (+)
G73578 NA other upstream 2643737 8366806 ~ 8367627 (+)
CI01000012_07806089_07811902 BEND3 other upstream 3203509 7805248 ~ 7811902 (+)
CI01000012_05923216_05928055 SRD5A2B other upstream 5087059 5922385 ~ 5929186 (+)
G71623 NA other upstream 5194759 5813517 ~ 5816605 (+)
G75533 NA other downstream 130886 11144817 ~ 11145739 (+)
G76385 NA other downstream 1616824 12630755 ~ 12675666 (+)
G76374 NA other downstream 1731600 12745531 ~ 12749169 (+)
CI01000012_13029637_13033226 RGS17 other downstream 2001575 13029435 ~ 13038899 (+)
G76645 NA other downstream 2637928 13651859 ~ 13652234 (+)

Expression


Co-expression Network