Gene
RNA
| Item | Value |
|---|---|
| gene id | G162930 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035914.1 |
| NCBI id | CM008317.1 |
| chromosome length | 41377133 |
| location | 36562589 ~ 36562903 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU220694 | True | 315 | lncRNA | 0.45 | 1 | 36562589 | 36562903 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC111194719 | NA | coding | upstream | 122781 | 36391175 ~ 36439808 (+) |
| rab27a | rab27a,LOC107735066,LOC107600376,LOC107659079 | coding | upstream | 339554 | 36188768 ~ 36223035 (+) |
| LOC103046170 | NA | coding | upstream | 414487 | 36142088 ~ 36148102 (+) |
| dnaaf4 | NA | coding | upstream | 425849 | 36127139 ~ 36136740 (+) |
| prtg | prtg | coding | upstream | 452182 | 36073806 ~ 36110407 (+) |
| LOC103026877 | unc13c,LOC108411445 | coding | downstream | 407807 | 36970710 ~ 37261985 (+) |
| LOC103045417 | NA | coding | downstream | 824591 | 37387494 ~ 37399839 (+) |
| LOC103045107 | dhdh,LOC108431994,LOC107665090,LOC106587215 | coding | downstream | 838625 | 37401528 ~ 37407914 (+) |
| parp6 | parp6 | coding | downstream | 892832 | 37455735 ~ 37507197 (+) |
| LOC111194820 | celf6 | coding | downstream | 1027082 | 37589985 ~ 37835900 (+) |
| G162927 | NA | non-coding | upstream | 17836 | 36544470 ~ 36544753 (+) |
| G162917 | NA | non-coding | upstream | 74606 | 36487768 ~ 36487983 (+) |
| G162904 | NA | non-coding | upstream | 174197 | 36388021 ~ 36388392 (+) |
| G162893 | NA | non-coding | upstream | 289227 | 36273124 ~ 36273362 (+) |
| G162883 | NA | non-coding | upstream | 328501 | 36233752 ~ 36234088 (+) |
| G162941 | NA | non-coding | downstream | 107084 | 36669987 ~ 36671428 (+) |
| G162942 | NA | non-coding | downstream | 107470 | 36670373 ~ 36671942 (+) |
| G162943 | NA | non-coding | downstream | 117626 | 36680529 ~ 36680776 (+) |
| G162944 | NA | non-coding | downstream | 129558 | 36692461 ~ 36692696 (+) |
| G162946 | NA | non-coding | downstream | 131701 | 36694604 ~ 36694927 (+) |
| ccpg1 | ccpg1 | other | upstream | 392844 | 36132415 ~ 36169745 (+) |
| pygo1 | pygo1 | other | upstream | 442187 | 36112042 ~ 36120402 (+) |
| ss18l2 | ss18l2,kiaa0355 | other | upstream | 747796 | 35807865 ~ 35814793 (+) |
| G162096 | LOC103040777,LOC108439298,LOC108256343,LOC101172525 | other | upstream | 3843314 | 32714183 ~ 32719275 (+) |
| G162032 | NA | other | upstream | 4267560 | 32236316 ~ 32295029 (+) |
| G162964 | LOC108431875,LOC108413582 | other | downstream | 191282 | 36754185 ~ 36754687 (+) |
| LOC103046025 | hcn4,LOC108263998 | other | downstream | 724264 | 37287167 ~ 37352779 (+) |
| G163105 | kpyk,LOC103044212,LOC108432067,LOC108264538,LOC106587214 | other | downstream | 847089 | 37409992 ~ 37411969 (+) |
| reln | reln | other | downstream | 3012186 | 39575089 ~ 39788454 (+) |
