Gene
RNA
| Item | Value |
|---|---|
| gene id | G162942 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035914.1 |
| NCBI id | CM008317.1 |
| chromosome length | 41377133 |
| location | 36670373 ~ 36671942 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU220706 | True | 390 | lncRNA | 0.27 | 2 | 36670373 | 36671942 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC111194719 | NA | coding | upstream | 230565 | 36391175 ~ 36439808 (+) |
| rab27a | rab27a,LOC107735066,LOC107600376,LOC107659079 | coding | upstream | 447338 | 36188768 ~ 36223035 (+) |
| LOC103046170 | NA | coding | upstream | 522271 | 36142088 ~ 36148102 (+) |
| dnaaf4 | NA | coding | upstream | 533633 | 36127139 ~ 36136740 (+) |
| prtg | prtg | coding | upstream | 559966 | 36073806 ~ 36110407 (+) |
| LOC103026877 | unc13c,LOC108411445 | coding | downstream | 298768 | 36970710 ~ 37261985 (+) |
| LOC103045417 | NA | coding | downstream | 715552 | 37387494 ~ 37399839 (+) |
| LOC103045107 | dhdh,LOC108431994,LOC107665090,LOC106587215 | coding | downstream | 729586 | 37401528 ~ 37407914 (+) |
| parp6 | parp6 | coding | downstream | 783793 | 37455735 ~ 37507197 (+) |
| LOC111194820 | celf6 | coding | downstream | 918043 | 37589985 ~ 37835900 (+) |
| G162930 | NA | non-coding | upstream | 107470 | 36562589 ~ 36562903 (+) |
| G162927 | NA | non-coding | upstream | 125620 | 36544470 ~ 36544753 (+) |
| G162917 | NA | non-coding | upstream | 182390 | 36487768 ~ 36487983 (+) |
| G162904 | NA | non-coding | upstream | 281981 | 36388021 ~ 36388392 (+) |
| G162893 | NA | non-coding | upstream | 397011 | 36273124 ~ 36273362 (+) |
| G162943 | NA | non-coding | downstream | 8587 | 36680529 ~ 36680776 (+) |
| G162944 | NA | non-coding | downstream | 20519 | 36692461 ~ 36692696 (+) |
| G162946 | NA | non-coding | downstream | 22662 | 36694604 ~ 36694927 (+) |
| G162966 | NA | non-coding | downstream | 92364 | 36764306 ~ 36764572 (+) |
| G162973 | NA | non-coding | downstream | 103894 | 36775836 ~ 36776134 (+) |
| ccpg1 | ccpg1 | other | upstream | 500628 | 36132415 ~ 36169745 (+) |
| pygo1 | pygo1 | other | upstream | 549971 | 36112042 ~ 36120402 (+) |
| ss18l2 | ss18l2,kiaa0355 | other | upstream | 855580 | 35807865 ~ 35814793 (+) |
| G162096 | LOC103040777,LOC108439298,LOC108256343,LOC101172525 | other | upstream | 3951098 | 32714183 ~ 32719275 (+) |
| G162032 | NA | other | upstream | 4375344 | 32236316 ~ 32295029 (+) |
| G162964 | LOC108431875,LOC108413582 | other | downstream | 82243 | 36754185 ~ 36754687 (+) |
| LOC103046025 | hcn4,LOC108263998 | other | downstream | 615225 | 37287167 ~ 37352779 (+) |
| G163105 | kpyk,LOC103044212,LOC108432067,LOC108264538,LOC106587214 | other | downstream | 738050 | 37409992 ~ 37411969 (+) |
| reln | reln | other | downstream | 2903147 | 39575089 ~ 39788454 (+) |
