G163020


Basic Information

Item Value
gene id G163020
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 36916290 ~ 36916502 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU220786
gtgagtcttggtcctcccaaggtttcttcctcctcctgcagctctgagggagtttttccttgcctccgcgctcactgggggttctgtattctgtattttctatgtgtaatgttttgcctgattctttgtcctgtaatcatgtttctgtaaagctgctttgtgccaacaccagttgtaaaaagcgctatacaaataaatttgatttgatttgat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU220786 True 213 lncRNA 0.42 1 36916290 36916502

Neighbor

gene id symbol gene type direction distance location
LOC111194719 NA coding upstream 476482 36391175 ~ 36439808 (+)
rab27a rab27a,LOC107735066,LOC107600376,LOC107659079 coding upstream 693255 36188768 ~ 36223035 (+)
LOC103046170 NA coding upstream 768188 36142088 ~ 36148102 (+)
dnaaf4 NA coding upstream 779550 36127139 ~ 36136740 (+)
prtg prtg coding upstream 805883 36073806 ~ 36110407 (+)
LOC103026877 unc13c,LOC108411445 coding downstream 54208 36970710 ~ 37261985 (+)
LOC103045417 NA coding downstream 470992 37387494 ~ 37399839 (+)
LOC103045107 dhdh,LOC108431994,LOC107665090,LOC106587215 coding downstream 485026 37401528 ~ 37407914 (+)
parp6 parp6 coding downstream 539233 37455735 ~ 37507197 (+)
LOC111194820 celf6 coding downstream 673483 37589985 ~ 37835900 (+)
G163012 NA non-coding upstream 11442 36904649 ~ 36904848 (+)
G163009 NA non-coding upstream 16348 36899692 ~ 36899942 (+)
G163004 NA non-coding upstream 41914 36873673 ~ 36874376 (+)
G162977 NA non-coding upstream 82493 36833374 ~ 36833797 (+)
G162973 NA non-coding upstream 140156 36775836 ~ 36776134 (+)
G163022 NA non-coding downstream 10023 36926525 ~ 36926814 (+)
G163028 NA non-coding downstream 27935 36944437 ~ 36952651 (+)
G163030 NA non-coding downstream 37184 36953686 ~ 36954992 (+)
G163035 NA non-coding downstream 39902 36956404 ~ 36956671 (+)
G163039 NA non-coding downstream 43327 36959829 ~ 36960553 (+)
G162964 LOC108431875,LOC108413582 other upstream 161603 36754185 ~ 36754687 (+)
ccpg1 ccpg1 other upstream 746545 36132415 ~ 36169745 (+)
pygo1 pygo1 other upstream 795888 36112042 ~ 36120402 (+)
ss18l2 ss18l2,kiaa0355 other upstream 1101497 35807865 ~ 35814793 (+)
G162096 LOC103040777,LOC108439298,LOC108256343,LOC101172525 other upstream 4197015 32714183 ~ 32719275 (+)
LOC103046025 hcn4,LOC108263998 other downstream 370665 37287167 ~ 37352779 (+)
G163105 kpyk,LOC103044212,LOC108432067,LOC108264538,LOC106587214 other downstream 493490 37409992 ~ 37411969 (+)
reln reln other downstream 2658587 39575089 ~ 39788454 (+)

Expression


Co-expression Network