G163030



Basic Information


Item Value
gene id G163030
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 36953686 ~ 36954992 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence


>TU220846
aagaataagacttaagaagaacaatactgtgattgcattactgcaatcacactaataataataataataataataataataagaagaagaagaagaagaagaataagacttaagaagaacaatactgtgattgcattactgcaatcacactaataataataataagaagaagaagaataagacttaagaagaacaatactgtgattgcattactgcaatcacactaataagaagaagaagaataagacttaagaagaacaatactgtgattgcattactgcaatcacactaataataataataagaagaagaa

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU220846 True 313 lncRNA 0.27 2 36953686 36954992

Neighbor


gene id symbol gene type direction distance location
LOC111194719 NA coding upstream 513878 36391175 ~ 36439808 (+)
rab27a rab27a,LOC107735066,LOC107600376,LOC107659079 coding upstream 730651 36188768 ~ 36223035 (+)
LOC103046170 NA coding upstream 805584 36142088 ~ 36148102 (+)
dnaaf4 NA coding upstream 816946 36127139 ~ 36136740 (+)
prtg prtg coding upstream 843279 36073806 ~ 36110407 (+)
LOC103026877 unc13c,LOC108411445 coding downstream 15718 36970710 ~ 37261985 (+)
LOC103045417 NA coding downstream 432502 37387494 ~ 37399839 (+)
LOC103045107 dhdh,LOC108431994,LOC107665090,LOC106587215 coding downstream 446536 37401528 ~ 37407914 (+)
parp6 parp6 coding downstream 500743 37455735 ~ 37507197 (+)
LOC111194820 celf6 coding downstream 634993 37589985 ~ 37835900 (+)
G163028 NA non-coding upstream 1035 36944437 ~ 36952651 (+)
G163022 NA non-coding upstream 26872 36926525 ~ 36926814 (+)
G163020 NA non-coding upstream 37184 36916290 ~ 36916502 (+)
G163012 NA non-coding upstream 48838 36904649 ~ 36904848 (+)
G163009 NA non-coding upstream 53744 36899692 ~ 36899942 (+)
G163035 NA non-coding downstream 1412 36956404 ~ 36956671 (+)
G163039 NA non-coding downstream 4837 36959829 ~ 36960553 (+)
G163045 NA non-coding downstream 135116 37090108 ~ 37091582 (+)
G163049 NA non-coding downstream 295751 37250743 ~ 37251338 (+)
G163071 NA non-coding downstream 345775 37300767 ~ 37301122 (+)
G162964 LOC108431875,LOC108413582 other upstream 198999 36754185 ~ 36754687 (+)
ccpg1 ccpg1 other upstream 783941 36132415 ~ 36169745 (+)
pygo1 pygo1 other upstream 833284 36112042 ~ 36120402 (+)
ss18l2 ss18l2,kiaa0355 other upstream 1138893 35807865 ~ 35814793 (+)
G162096 LOC103040777,LOC108439298,LOC108256343,LOC101172525 other upstream 4234411 32714183 ~ 32719275 (+)
LOC103046025 hcn4,LOC108263998 other downstream 332175 37287167 ~ 37352779 (+)
G163105 kpyk,LOC103044212,LOC108432067,LOC108264538,LOC106587214 other downstream 455000 37409992 ~ 37411969 (+)
reln reln other downstream 2620097 39575089 ~ 39788454 (+)

Expression



Co-expression Network