G163045


Basic Information

Item Value
gene id G163045
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 37090108 ~ 37091582 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU220867
tatctttgacagtgttgtgtaaactaagatttttcaaattgatgtttaatttcatgatgtctcttaatattaaactccttaattacggcaacttttagactctggtctgtttttctgcgctagaaatgcgcactctctccgcttttagactctttggcatgtttttctgcgctagaaatgcgcactctctccgcttttagattctttggtctgtttttctacactagaaatgcgcactctctctgcttttagactctttggcccctttttctgcactagaaatgcgcactctctccgcttttagactctttggtctgtttttctgcactagaaatgtgcactctctcctcttttagactctttggcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU220867 True 367 lncRNA 0.40 2 37090108 37091582

Neighbor

gene id symbol gene type direction distance location
LOC111194719 NA coding upstream 650300 36391175 ~ 36439808 (+)
rab27a rab27a,LOC107735066,LOC107600376,LOC107659079 coding upstream 867073 36188768 ~ 36223035 (+)
LOC103046170 NA coding upstream 942006 36142088 ~ 36148102 (+)
dnaaf4 NA coding upstream 953368 36127139 ~ 36136740 (+)
prtg prtg coding upstream 979701 36073806 ~ 36110407 (+)
LOC103045417 NA coding downstream 295912 37387494 ~ 37399839 (+)
LOC103045107 dhdh,LOC108431994,LOC107665090,LOC106587215 coding downstream 309946 37401528 ~ 37407914 (+)
parp6 parp6 coding downstream 364153 37455735 ~ 37507197 (+)
LOC111194820 celf6 coding downstream 498403 37589985 ~ 37835900 (+)
LOC103021700 LOC103021700,LOC102310173,LOC102785042,LOC102211940,LOC101470544 coding downstream 852619 37944201 ~ 37946249 (+)
G163039 NA non-coding upstream 129555 36959829 ~ 36960553 (+)
G163035 NA non-coding upstream 133437 36956404 ~ 36956671 (+)
G163030 NA non-coding upstream 135116 36953686 ~ 36954992 (+)
G163028 NA non-coding upstream 137457 36944437 ~ 36952651 (+)
G163022 NA non-coding upstream 163294 36926525 ~ 36926814 (+)
G163049 NA non-coding downstream 159161 37250743 ~ 37251338 (+)
G163071 NA non-coding downstream 209185 37300767 ~ 37301122 (+)
G163087 NA non-coding downstream 274536 37366118 ~ 37371848 (+)
G163095 NA non-coding downstream 282424 37374006 ~ 37374205 (+)
G163110 NA non-coding downstream 345986 37437568 ~ 37438049 (+)
G162964 LOC108431875,LOC108413582 other upstream 335421 36754185 ~ 36754687 (+)
ccpg1 ccpg1 other upstream 920363 36132415 ~ 36169745 (+)
pygo1 pygo1 other upstream 969706 36112042 ~ 36120402 (+)
ss18l2 ss18l2,kiaa0355 other upstream 1275315 35807865 ~ 35814793 (+)
G162096 LOC103040777,LOC108439298,LOC108256343,LOC101172525 other upstream 4370833 32714183 ~ 32719275 (+)
LOC103046025 hcn4,LOC108263998 other downstream 195585 37287167 ~ 37352779 (+)
G163105 kpyk,LOC103044212,LOC108432067,LOC108264538,LOC106587214 other downstream 318410 37409992 ~ 37411969 (+)
reln reln other downstream 2483507 39575089 ~ 39788454 (+)

Expression


Co-expression Network