G163049


Basic Information

Item Value
gene id G163049
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 37250743 ~ 37251338 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU220871
gcttaaaggaggtcgaagggaaataaagggatagagaagtgaaggaggggaagaaggaaatggggttagaagtagttagtgtgttagaggtgttaggagagtaagtgctctttgaagagctctgtcttcaggagtttattaaagatagtgagagattctcctgatctggtagtagaaggtagttagttagaggtgttaggagagtaagtgctttttgaagagctctgtcttcaggagtttattaaagatagcgagagattctcctgatttggtagtagaaggtagtt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU220871 True 287 lncRNA 0.41 2 37250743 37251338

Neighbor

gene id symbol gene type direction distance location
LOC111194719 NA coding upstream 810935 36391175 ~ 36439808 (+)
rab27a rab27a,LOC107735066,LOC107600376,LOC107659079 coding upstream 1027708 36188768 ~ 36223035 (+)
LOC103046170 NA coding upstream 1102641 36142088 ~ 36148102 (+)
dnaaf4 NA coding upstream 1114003 36127139 ~ 36136740 (+)
prtg prtg coding upstream 1140336 36073806 ~ 36110407 (+)
LOC103045417 NA coding downstream 136156 37387494 ~ 37399839 (+)
LOC103045107 dhdh,LOC108431994,LOC107665090,LOC106587215 coding downstream 150190 37401528 ~ 37407914 (+)
parp6 parp6 coding downstream 204397 37455735 ~ 37507197 (+)
LOC111194820 celf6 coding downstream 338647 37589985 ~ 37835900 (+)
LOC103021700 LOC103021700,LOC102310173,LOC102785042,LOC102211940,LOC101470544 coding downstream 692863 37944201 ~ 37946249 (+)
G163045 NA non-coding upstream 159161 37090108 ~ 37091582 (+)
G163039 NA non-coding upstream 290190 36959829 ~ 36960553 (+)
G163035 NA non-coding upstream 294072 36956404 ~ 36956671 (+)
G163030 NA non-coding upstream 295751 36953686 ~ 36954992 (+)
G163028 NA non-coding upstream 298092 36944437 ~ 36952651 (+)
G163071 NA non-coding downstream 49429 37300767 ~ 37301122 (+)
G163087 NA non-coding downstream 114780 37366118 ~ 37371848 (+)
G163095 NA non-coding downstream 122668 37374006 ~ 37374205 (+)
G163110 NA non-coding downstream 186230 37437568 ~ 37438049 (+)
G163161 NA non-coding downstream 296699 37548037 ~ 37548293 (+)
G162964 LOC108431875,LOC108413582 other upstream 496056 36754185 ~ 36754687 (+)
ccpg1 ccpg1 other upstream 1080998 36132415 ~ 36169745 (+)
pygo1 pygo1 other upstream 1130341 36112042 ~ 36120402 (+)
ss18l2 ss18l2,kiaa0355 other upstream 1435950 35807865 ~ 35814793 (+)
G162096 LOC103040777,LOC108439298,LOC108256343,LOC101172525 other upstream 4531468 32714183 ~ 32719275 (+)
LOC103046025 hcn4,LOC108263998 other downstream 35829 37287167 ~ 37352779 (+)
G163105 kpyk,LOC103044212,LOC108432067,LOC108264538,LOC106587214 other downstream 158654 37409992 ~ 37411969 (+)
reln reln other downstream 2323751 39575089 ~ 39788454 (+)

Expression


Co-expression Network