G163071


Basic Information

Item Value
gene id G163071
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 37300767 ~ 37301122 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU220893
TGGTGACTGGAttgcgttttgaaggtaagagtgtgggggaagcgctggagggggttgggtgtgtgtctcgagtgtcctgaggtaaacacaaagcgaaacacaagcagatttaaactctaaacacagttccgtaatccggagaggcagacggttcgaatggtgtataacatgtccgcattcgatcaaatatggacgtacgaaaaacgcaaatatgaaaataatatttcataactttcataaaccaggcatatttcgccctaaatgtttattttctgaaaggagatacggttaaataggctagataactgaaaagctttaaaatggcatattgggtgtctacatTGAACCTATAAGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU220893 True 356 lncRNA 0.40 1 37300767 37301122

Neighbor

gene id symbol gene type direction distance location
LOC103026877 unc13c,LOC108411445 coding upstream 38782 36970710 ~ 37261985 (+)
LOC111194719 NA coding upstream 860959 36391175 ~ 36439808 (+)
rab27a rab27a,LOC107735066,LOC107600376,LOC107659079 coding upstream 1077732 36188768 ~ 36223035 (+)
LOC103046170 NA coding upstream 1152665 36142088 ~ 36148102 (+)
dnaaf4 NA coding upstream 1164027 36127139 ~ 36136740 (+)
LOC103045417 NA coding downstream 86372 37387494 ~ 37399839 (+)
LOC103045107 dhdh,LOC108431994,LOC107665090,LOC106587215 coding downstream 100406 37401528 ~ 37407914 (+)
parp6 parp6 coding downstream 154613 37455735 ~ 37507197 (+)
LOC111194820 celf6 coding downstream 288863 37589985 ~ 37835900 (+)
LOC103021700 LOC103021700,LOC102310173,LOC102785042,LOC102211940,LOC101470544 coding downstream 643079 37944201 ~ 37946249 (+)
G163049 NA non-coding upstream 49429 37250743 ~ 37251338 (+)
G163045 NA non-coding upstream 209185 37090108 ~ 37091582 (+)
G163039 NA non-coding upstream 340214 36959829 ~ 36960553 (+)
G163035 NA non-coding upstream 344096 36956404 ~ 36956671 (+)
G163030 NA non-coding upstream 345775 36953686 ~ 36954992 (+)
G163087 NA non-coding downstream 64996 37366118 ~ 37371848 (+)
G163095 NA non-coding downstream 72884 37374006 ~ 37374205 (+)
G163110 NA non-coding downstream 136446 37437568 ~ 37438049 (+)
G163161 NA non-coding downstream 246915 37548037 ~ 37548293 (+)
G163241 cox5ab,LOC107595344,LOC107713225,LOC103046663,LOC108432642,LOC107665137 non-coding downstream 663208 37964330 ~ 37977105 (+)
G162964 LOC108431875,LOC108413582 other upstream 546080 36754185 ~ 36754687 (+)
ccpg1 ccpg1 other upstream 1131022 36132415 ~ 36169745 (+)
pygo1 pygo1 other upstream 1180365 36112042 ~ 36120402 (+)
ss18l2 ss18l2,kiaa0355 other upstream 1485974 35807865 ~ 35814793 (+)
G162096 LOC103040777,LOC108439298,LOC108256343,LOC101172525 other upstream 4581492 32714183 ~ 32719275 (+)
G163105 kpyk,LOC103044212,LOC108432067,LOC108264538,LOC106587214 other downstream 108870 37409992 ~ 37411969 (+)
reln reln other downstream 2273967 39575089 ~ 39788454 (+)

Expression


Co-expression Network