G163161


Basic Information

Item Value
gene id G163161
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 37548037 ~ 37548293 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU221004
CTTAATCTCACAGCGGGGGAGGGGCTTTTCCCCCCACCACTCTCCCCCACACTCTCCTGCGcacgccgcaaaaccagcaagctgattggctgtttctattgagaggcggaacttaattcctgaaccggctccgtgattggcgttaagagatttcccatttaCTCAGCGGtcacctgtctcctcattaatagtacagctgatctgagcgaaaccattttatttttgggggggacaaatccaccttttTCTAATAttgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU221004 True 257 lncRNA 0.50 1 37548037 37548293

Neighbor

gene id symbol gene type direction distance location
parp6 parp6 coding upstream 40840 37455735 ~ 37507197 (+)
LOC103045107 dhdh,LOC108431994,LOC107665090,LOC106587215 coding upstream 140123 37401528 ~ 37407914 (+)
LOC103045417 NA coding upstream 148198 37387494 ~ 37399839 (+)
LOC103026877 unc13c,LOC108411445 coding upstream 286052 36970710 ~ 37261985 (+)
LOC111194719 NA coding upstream 1108229 36391175 ~ 36439808 (+)
LOC111194820 celf6 coding downstream 41692 37589985 ~ 37835900 (+)
LOC103021700 LOC103021700,LOC102310173,LOC102785042,LOC102211940,LOC101470544 coding downstream 395908 37944201 ~ 37946249 (+)
LOC111194723 LOC107704663 coding downstream 1396109 38944402 ~ 38945904 (+)
LOC111194822 LOC107569781 coding downstream 1397883 38946176 ~ 38951124 (+)
LOC111194738 LOC104947953,LOC106536897 coding downstream 1544186 39092479 ~ 39094807 (+)
G163110 NA non-coding upstream 109988 37437568 ~ 37438049 (+)
G163095 NA non-coding upstream 173832 37374006 ~ 37374205 (+)
G163087 NA non-coding upstream 176189 37366118 ~ 37371848 (+)
G163071 NA non-coding upstream 246915 37300767 ~ 37301122 (+)
G163049 NA non-coding upstream 296699 37250743 ~ 37251338 (+)
G163241 cox5ab,LOC107595344,LOC107713225,LOC103046663,LOC108432642,LOC107665137 non-coding downstream 416037 37964330 ~ 37977105 (+)
G163247 NA non-coding downstream 436765 37985058 ~ 37987068 (+)
G163288 NA non-coding downstream 1122989 38671282 ~ 38672233 (+)
G163296 NA non-coding downstream 1189426 38737719 ~ 38740775 (+)
G163297 NA non-coding downstream 1194502 38742795 ~ 38744936 (+)
G163105 kpyk,LOC103044212,LOC108432067,LOC108264538,LOC106587214 other upstream 136068 37409992 ~ 37411969 (+)
LOC103046025 hcn4,LOC108263998 other upstream 195258 37287167 ~ 37352779 (+)
G162964 LOC108431875,LOC108413582 other upstream 793350 36754185 ~ 36754687 (+)
ccpg1 ccpg1 other upstream 1378292 36132415 ~ 36169745 (+)
pygo1 pygo1 other upstream 1427635 36112042 ~ 36120402 (+)
reln reln other downstream 2026796 39575089 ~ 39788454 (+)

Expression


Co-expression Network