CI01000012_11616967_11694276


Basic Information

Item Value
gene id CI01000012_11616967_11694276
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 11615547 ~ 11694284 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_11616967_11694276.mRNA
ACATAAAAGCCATCCTCTCATACTGCTGACATATGGCTTGAAAAGCTGCCTCTGGTTTGTTTTGGAGAGGTGGAAATTGAACACAACGGCTATTTGAAGTGGGTCGAGACGCTCTTTCTGAAGCTGAATATACCAATGACAGTATAGAGAGAAGAAAGCAAAAGCCTTGCTATTACAACCTGTGAGGTTTTGAAAGTTACCAATGGAGGCGTGAGGGGAAGGGGATCGAGCTGAGATTTGTATTTGTGTCAAGTGGTGTAAAACCTCAAACGTCGACCACCAGCTCTCACCAAAAGAGCAAAACATGGGTCCCCATTCACACCTGGTGTTACAATCCACTTTGAGATCCAAGTGATTAGGCAAGATCTGGTAGTCACTTCTGAGTGAATGCTTCACTTGGTGATGTTATGTTATGCTTTGTGCATTTATTTATTCCACTTAAAATGTCAAAATCTTTCTGATGGTTAATTTCTTTTAAAGTCACACATAACCATTGATTTATGACAGTGGATGATTGACAGGTGAGCATCAGGACTGATTAATGTTGACACTATACATGTATTTTCATCTACCTCTGAATCAGTGCTATTTTAGTGTTATTCACTATGATACCATTTATTAATTTTTCATAATTTTTTCATCTATTTTTTTATTTATTTTTTTTATTTCAACTTTGTTTAAATAAAGAAAACAATTTTAAATAGTTTTCATTTTTTCATTTTTTAATAGTTCTTCATTTTTAGGATATGTTCACAACCTGATTGGTCGGATTTTATGACGTATTGCCTATTTTGAGACGGAACTTACCGAACATCCAAAACAATGCTGTGTGCTGAGATAAATGCGCTTGTTCTGTGTGCGTAGCTTGCATTTAATGGTATTTTGGCTGGCTGGGAACTCGTAACGAGTTTATAAAATGTGTAAAGAAGTCAAAACAGCGGCGGGAATCCATCCGTCACACACAAACGATCTGCTGCGTGGCGACGCGCATCTGATTCCTGTGATGGGCAAACTCGCGACTATGACGAGAAAAAACGATATACGTGAGCATTCTGTCCTTTTTAGGTTCTCATCTTCCTGTTTTTGGTTCATTTACATGTCTTTGGCCCGTGTTGCGTTTAACGTTATATATCATTCGAACCGCACCAGAGTTCGTTTGGAAGTTCGCTTTTTTGGTGCGCACCAGGGTTCGGATGGCAGCGTTCACACGTTCAAATGAACCGCACCGCACCAGGGTTCGTTTTAATCGAAACAAATATGACAAGTGTGAACAAACCCTTAGTTAACAATAATAGCACGGCTCCGAATGTGATTTGTAAGATTGTGTCACAAAACATATTGCACCCCGTTTACACTTATATTAAGCGCTCACCCCTCGTGACTGGATCACCTGTGATGGGTCTCGGGTGTAAATGAGGCCATGGAGGTATTCTTGCAAACTTCTGCCAGTGTCTCTCTAGTTCTCCTCACCTCCTCTGTGCTCATTTTTACACTTACACGAAATCTATCCCAAGCAGTGCTGGCTCAGAGAGAGATAACAGTGGATTTGGTCCCGGCTGGGCCAATGATTTCCACATTGAAACTGCTATTCATATCAGAGAAGCTGCCTGAACATCAGGCAAGAGAAAAGGTCTTTAACCAGTCCAACTCTTGGCAGATCTGGATGGAGGAGGGCGAGGACCTGGGGGAAGAATATCCACAGGTCATAGTAAATAAAGTTTGGAGAATATACAGTATAGAGATGTTTAACTTGAACAAAACCCATTTGCTCCAGTACAGCAGGAGGAATGGTATTCAGGTGGTCCCCTCCTTCTCCTCATGCAGCCCTCTGCCCATAAGAGCCTCCCAATCAATAGAGATGTCCTCTTCACACATCCGTGTGATATTGCAGGACAGAACTGAAGTCGAGAAACAGGGTGTCAGATTGACAGAGGTAATGGAGAAAGCTGGTGATGATGGGACTTTGCGAAGCACTGCCATTCAGTCCAACTCAATTTCAGTTCCAATTAAAAACAGCCCAAACAGAACTGTGCATACTGCGGCAGGTCGGCAAAAGCTCCGATTGCTTGTGTGGAGCTGGTTTTTCCTGGCTACTGTCACGTTAGAGAGGTTAAATTGGAGGTGGCAGTGCCCACTGACTCCAAGACTTGATGTGGCCTGGTCGCTGGAGCTCTCGAGGTGTAGAGAGAAAGACTGTGAGGGAGGAGAAAAGATGTGTGGAGGAAGCCCTTACTGTCCAAAAATTCTCACAGACGGCTTTTGTGCTTCCATCTCTCCACATTGTTCTCTTATTGATCTCCACATGGCATGCTATAAATCTGCCTTGAGTAAGAAGGCCAAGGTTCCACAGAGATTTTGTGTGCTTTTCTTTCTCAAAAGGCTGATACAGGCTGTCCTCTTGTACTCTGATTTTCTGGTTAGCCTGTCAACCCGACCGAGCTTGAGCCGAGGTGTCGGATGCCTGGAGAACCAGTGTCCTCAGACCTGCGGCAAGAGTTTGAAGCCAAGTGGTGGTGACAAAGAGAGGAGCCTGCGAGCTCCATCCCTCCATCCTGACGTGATGGAGAGGAGCCGAGGCTCTCGCACGAAACAAATGATTATGATCTGCTTCATGCATCCTAGGCTTTGTTTCAGTAGACACGTTTATCAGGGTGGTCTGTCAGAAAAATGTGGCCTTTACAAACTGAAGGACAAACGGAGGTATAAAGCAGGTCAGAAGCTGACCACGATCACATCTCTCAGCTCTATTTCCATTCATTTCTGTGGAAACTCAGCGGCACAGTGCAGTGTAGCCATTGTTTCTCTAACAGGAATTTCTCCCTCCTTTTTCTTCCCTCTGGGTCTGGGTGTTTCCTCGATTCTTAAGCAGTGGCCCAGTACTGTCAGAGAGGCAGCTAGCGCTGCATTACTCATCACACTGGTCCGAAGTGTGTTAGCCGCCCAGATGAGGAGAACCTGGGAGAAGGCAGGCCGGCCCACTTCACGACAATTACCCTATGAATCACAACGAGACAACAGCACAGGCCCACAGGCAAGGCCTGTGATCATGTGTACTGACAGTTTCCCCCACCCTCCTCACTCAGCTCAAGTCTCGTGTGAAATTTCTGTGAAGGGCCAGTATTGGCTTATATCTGCTAGTAAACCATGGGTCAGTTGCAAAGACAACAGTTCAAGTGCAGACAACATCAATACCGGCGAGCATGTGTGCAAAACATTAGCCTTGAAATCTTAGCCCATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_11616967_11694276.mRNA False 3240 mRNA 0.45 16 11615547 11694284

Neighbor

gene id symbol gene type direction distance location
CI01000012_11319849_11326035 NA coding upstream 288643 11319060 ~ 11326904 (+)
CI01000012_11277561_11292490 VRK2 coding upstream 322911 11277561 ~ 11292636 (+)
CI01000012_11091957_11093675 CCDC85A coding upstream 521773 11091957 ~ 11093774 (+)
CI01000012_11043669_11044569 NA coding upstream 570906 11043394 ~ 11044670 (+)
CI01000012_11011437_11013922 NA coding upstream 601616 11011364 ~ 11013931 (+)
CI01000012_11698150_11702986 NA coding downstream 2831 11697115 ~ 11703213 (+)
CI01000012_11859839_11869022 PAPOLG coding downstream 165465 11859749 ~ 11870657 (+)
CI01000012_11874504_11884601 REL coding downstream 180220 11874504 ~ 11885292 (+)
CI01000012_11897443_11903607 PDLIM1 coding downstream 203159 11897443 ~ 11903607 (+)
CI01000012_11913513_11921468 SGPL1 coding downstream 219229 11913513 ~ 11921935 (+)
G76018 NA non-coding upstream 363445 11251817 ~ 11252102 (+)
G75588 NA non-coding upstream 430260 11185061 ~ 11185287 (+)
G75583 NA non-coding upstream 440832 11174487 ~ 11174715 (+)
G75578 NA non-coding upstream 446766 11168553 ~ 11168781 (+)
G75571 NA non-coding upstream 453002 11162228 ~ 11162545 (+)
G76137 NA non-coding downstream 80255 11774539 ~ 11774869 (+)
G76138 NA non-coding downstream 80701 11774985 ~ 11775184 (+)
G76143 NA non-coding downstream 91196 11785480 ~ 11785691 (+)
G76146 NA non-coding downstream 92755 11787039 ~ 11787385 (+)
G76148 NA non-coding downstream 94407 11788691 ~ 11788909 (+)
G75533 NA other upstream 469808 11144817 ~ 11145739 (+)
CI01000012_10223957_10235955 NA other upstream 1391260 10223697 ~ 10236276 (+)
G73578 NA other upstream 3247920 8366806 ~ 8367627 (+)
CI01000012_07806089_07811902 BEND3 other upstream 3807692 7805248 ~ 7811902 (+)
CI01000012_05923216_05928055 SRD5A2B other upstream 5691242 5922385 ~ 5929186 (+)
G76385 NA other downstream 936471 12630755 ~ 12675666 (+)
G76374 NA other downstream 1051247 12745531 ~ 12749169 (+)
CI01000012_13029637_13033226 RGS17 other downstream 1321222 13029435 ~ 13038899 (+)
G76645 NA other downstream 1957575 13651859 ~ 13652234 (+)
G76656 NA other downstream 2009203 13703487 ~ 13739731 (+)

Expression


Co-expression Network