G163769


Basic Information

Item Value
gene id G163769
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 40058342 ~ 40058608 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU221784
tctgagagagagagagagagagagagagagtacagtaggtcatgctgcttctccatcagcagccggagtctgagagagagagagtacagtaggtcatgctgcttctccatcagcagccggagtctgagagagagagagagagagagagagagagtacagtaggtcatgctgtttctccatcagcagccggagtctgagagagagagagagagagagagagagagagagagagagtacagtaggtcatgctgtttctccatcagcagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU221784 True 267 lncRNA 0.52 1 40058342 40058608

Neighbor

gene id symbol gene type direction distance location
LOC103034226 NA coding upstream 130424 39838037 ~ 39927918 (+)
LOC111194742 NA coding upstream 237718 39814996 ~ 39820624 (+)
LOC103038446 LOC108443054,LOC108263931,LOC108265089 coding upstream 566266 39487766 ~ 39492076 (+)
pik3c2a pik3c2a coding upstream 720464 39271936 ~ 39337878 (+)
tspan3 tspan3,tspan3a,LOC107690355 coding upstream 866937 39185222 ~ 39191405 (+)
LOC103039568 sox9 coding downstream 206055 40264663 ~ 40270386 (+)
LOC103036843 sstr5,LOC108241368,LOC103468864,LOC107083133,LOC106942343,LOC103140984,LOC102219310,LOC106518680 coding downstream 700667 40759275 ~ 40765548 (+)
LOC111194726 sstr5,sstr2,LOC106601899,LOC101075299,LOC106606408 coding downstream 848533 40907141 ~ 40910721 (+)
rab26 rab26,LOC102798624,LOC100707100,LOC101484267 coding downstream 1089736 41148344 ~ 41319019 (+)
G163721 NA non-coding upstream 44979 39980392 ~ 40013363 (+)
G163722 NA non-coding upstream 55860 39981389 ~ 40002482 (+)
G163713 NA non-coding upstream 129528 39853379 ~ 39928814 (+)
LOC111194824 NA non-coding upstream 256150 39799040 ~ 39802192 (+)
G163693 NA non-coding upstream 264323 39793612 ~ 39794019 (+)
G163772 NA non-coding downstream 50790 40109398 ~ 40114303 (+)
G163773 NA non-coding downstream 52463 40111071 ~ 40193224 (+)
G163789 NA non-coding downstream 141616 40200224 ~ 40200492 (+)
G163791 NA non-coding downstream 150835 40209443 ~ 40209704 (+)
G163817 NA non-coding downstream 409029 40467637 ~ 40468459 (+)
reln reln other upstream 269888 39575089 ~ 39788454 (+)
G163105 kpyk,LOC103044212,LOC108432067,LOC108264538,LOC106587214 other upstream 2646373 37409992 ~ 37411969 (+)
LOC103046025 hcn4,LOC108263998 other upstream 2705563 37287167 ~ 37352779 (+)
G162964 LOC108431875,LOC108413582 other upstream 3303655 36754185 ~ 36754687 (+)
ccpg1 ccpg1 other upstream 3888597 36132415 ~ 36169745 (+)

Expression


Co-expression Network