G163982


Basic Information

Item Value
gene id G163982
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 41175317 ~ 41178149 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU222060
cacctcctccaagctcactctgcctcattgtACCTTACTGTACTATGCTGTACCCACTTTaacacactttacctcactgtaCCACACTACCACCCTCTATCTCACTTTACTGtgctataccctaatatacctcactgtaccgtactcttcctcacactaccacactctatactgtactgtaccctgCAATACCTCACTGTACTCTGCAATACCTCGCTATTCCTCACTGTATACTGCGATACTCCACTATACCTTAATTTTTCTCACACTACCACACTGTACCCtgctatactccctatactttaCCTCACCTTTACCTCACTGTACCCttctatacctcactatactttattctaccacactgtaccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU222060 True 369 lncRNA 0.44 3 41175317 41178149

Neighbor

gene id symbol gene type direction distance location
LOC111194726 sstr5,sstr2,LOC106601899,LOC101075299,LOC106606408 coding upstream 264596 40907141 ~ 40910721 (+)
LOC103036843 sstr5,LOC108241368,LOC103468864,LOC107083133,LOC106942343,LOC103140984,LOC102219310,LOC106518680 coding upstream 409769 40759275 ~ 40765548 (+)
LOC103039568 sox9 coding upstream 904931 40264663 ~ 40270386 (+)
LOC103034226 NA coding upstream 1247399 39838037 ~ 39927918 (+)
LOC111194742 NA coding upstream 1354693 39814996 ~ 39820624 (+)
G163981 NA non-coding upstream 301 41174118 ~ 41175016 (+)
G163961 NA non-coding upstream 93619 41081260 ~ 41081698 (+)
G163957 NA non-coding upstream 141073 41033986 ~ 41034244 (+)
G163956 NA non-coding upstream 144564 41030457 ~ 41030753 (+)
G163944 NA non-coding upstream 250028 40924965 ~ 40925289 (+)
G163977 NA non-coding downstream 144710 41322859 ~ 41324744 (+)
G163998 NA non-coding downstream 147059 41325208 ~ 41325426 (+)
reln reln other upstream 1386863 39575089 ~ 39788454 (+)
G163105 kpyk,LOC103044212,LOC108432067,LOC108264538,LOC106587214 other upstream 3763348 37409992 ~ 37411969 (+)
LOC103046025 hcn4,LOC108263998 other upstream 3822538 37287167 ~ 37352779 (+)
G162964 LOC108431875,LOC108413582 other upstream 4420630 36754185 ~ 36754687 (+)
ccpg1 ccpg1 other upstream 5005572 36132415 ~ 36169745 (+)

Expression


Co-expression Network