LOC103034808


Basic Information

Item Value
gene id LOC103034808
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 28016005 ~ 28020224 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007231525.3
ACTGCATTCCTTCTCCCTTTCTTTTCACTCACTATCTCTATGCCTTTCTTGTTAGGGGATGGCAGTGGATGCATGGCTATGGGCAATAGGATTCCTGGTTGGACCAGTCTGGGTGCACTCTTTGGGACTGTCTTGTACACAGCTGCAGAGCAGATGCATCTCAGGAAGCCTGTATAAAGACGGAGATGTGATCATTGGAGGGCTATTCCCTGTTCATTTTAAAGGCCCAGTACCTGATCGTAAATTCACGGAAAGAGTACCAGCAGGTCTGTGTCAAAGTGTTAACCTGCGCTTATACCTCTGGCTACAGACAATGATTTTCACAGTAATGGAAATCAACCAGGACCCAAACCTGTTGCCCAATCTCACACTGGGCTACTTGGTTGCAGACTCATGCCTGAGTGAGGCCAGTGCTCTGAGTGCTGCTCTGTCGCTAGTGACAGGGAATGTGAAGGTTGTGTCTGGAGAAGAGTGTACCAGGGCTCCCACTGTGCCTGTCATTATTGGTGATACTCTCTCAGCTTCTTCAATAGTGCTGGCTGATACACTAGGTGTTTTTGGCATCCCATTGGTCAGCTACTATGCTTCCTGTGCATGTCTCAGTGACCGCAAAAGGTTCCCCACTTTCATGCGCACTATTCCCAGCAATGCCTTCCAGGCTAAAGTCATTGCTCACCTGCTGCTGCAGGTGGGCTGGTCCTGGGTGGGGGTTATCTACGGAGATGATGCCTATGGGGAAACTAGTGCACAGCTGTTAGTGAATGAAGTGCAGGGTTCAGACGTGTGCATGGCCTACATGGAGATTATCCCCAAAACATACACAGTAAGCAAGCTTGGACAAATTGTAGAGAAAATCCAGAGCTCCAAGGCTCAGGTGGTGGTGATTTTGGCCATCATTGCAGAATCAGAGGCACTGCTGAGAGAAGCAGTTAACAGGAATGTCACAGATAAGCAGTGGATTGCTCCTACAGCCTGGAGTACCGCAGGCTACTACACTACATGGAGCGGCTTCACGTTAGTGGGCACTATTGGAATAGCCATACGAAGTGATGAGGTCCAAGGTTTGAGCCCCTATTTGACTAATGTCACCTCAGAGCATTACCCAACAGAGGAGCTAGAACAAAATGTTTGGGAGGAGTCATttggttgcaaatttgacaaAGAAAACCAGTCAAGCCTTTCAAGACCACAGTGCACAAACTTGGGAAATGTCCAAGTACAGTCAGCTGGATTTGATGGCATGTATGCTGTTTATAAGGCTGTGTATGCTGTTGCACATGCTATTCAAGACATGTTGGACTGTGTGCCGGGTAAAGGTCCATTTAAGAATGGAGAGTGTCCTGAGATAAAACCAATCATTCCTGAACAGCTTCTGTACTACATAAGGGCAGTTAAGTTCACAACACCAACAGGAGAACGTGTCTATTTTGATGACAATGGGGATCCAACTGGTTCATATGACATTGTCAACTGGCAAATTGGGTCTGAAGGAAAAGTAGAGTTTGTCAAAGTTGGCAATTTTGATTCCTCGAGAGGACCAGATAAAGATCTTGAACTAAACATACAGAATGTGGTCTGGGGAGGAGGCTGGGGTAAAAAGGTGCCGGTGTCTGTGTGCAGTGAAAGCTGTCCCTCGGGTAGCAGGAAGGCTGTGCAGAAAGGAAAGCCGATCTGCTGCTTTGACTGTATTCACTGTGCAGCGGGGGAGATCAGCAATGCTACTGACTCCACAGAGTGCATGAAGTGTCCTCAACGGTTCTGGTCCAACACTGATCGGACAGAATGCATCCCGATGACAGAGGAGTTCCTGTCTTTTCAAGACGACATGGGCATCATCCTCGCTGCACTGTCTGTTGCTGGGGCAGCACTTACTGGAACAGTCCTTGCTGCCTTCTATCGTCATCGAGATACACCCCTGGTCCGCGCCAATAACTCAGAGCTGAgcttcctgctgctgctctcacTCAAACTCTGCTTCCTGTGTGCTCTGGCTTTCATTGGCCGTCCAGCTCCTTGGTCCTGCATGCTGCGTCATACTCTGTTTGGGATCAGTTTTGTGGTGTGTCTGGCCTGTGTGCTCAGTAAGACCGTGGTGGTTCTGGTTGCATTCAGAGCAACTCTGCCTGGATCAAACTTAATGAAGTACTTTGGTCCTCTTCAGCAGAGAGCAGGTATCTTCTTCTGTACGATGGTGCAGGTGGGGATCTGTGTGCTGTGGCTGGCACTGGCACCACCTCTACCCACAGAAACTGCAGGAGGTGAGCTGGGAGCCCGTATAGTGCTCCTCTGTGCGGTGGGCTCTGTGGTGGGCTTTTCCCTGGTTCTGGGCTACATCGGATTGCTGGCATCCATCTGCTTTCTGTTGGCCTTCTTCGCAAGAAAACTTCCAGACAATTTCAATGAGGCCAAATTCATCACCTTCAGCATGCTGATCTTCTGTGCTGTGTGGATCACTTTTGTTCCAGCATACGTCAGCTCTCCTGGCAGATACACTGTGGCTGTGGAGGTCTTTGCCATTCTGGCTTCAAGTTACGGCCTTCTACTGTGCATCTTTGCCCCAAAGTGTTACATTATCTTACTCAGGCCAGAGAGGAACACAAAGAAGAACATGATGGCCAAATAAGTCGATACAGAGATTTCAcacaagaaaaaacaacaagagaGACTATAAAAAGTTAGCCAACATAGTTAGACTGTGTTCCCTCTATGTacaaaatgtgtgtataatCTTTTTCATTTTGTGCATTTAGTGTGCTCAGTTCTGGTCCTACAGGTCTACCATCCTGGAGTTCTGTTCCAATCAACGTGATTATAACGTTCATATGCCACTTATTGTTATCATTTACATCATGTGTGTTAGAATAGAGTTGGACCTTTAACTTTGCAGGCTGAAGGATCATAGGACCAGAATTGGGCACCCCAGTGATAGTGGCATTCTGTATAATGATTTTGAATACCACAGCACTGTCAAGTACTAGTATGTTTCCCCATAATGGTTACATGATACTAAAATGTGTTCTTGctatatttagtaaaataaacacatacatacatttaataa

Function

GO: NA

KEGG:

id description
ko04740 Olfactory transduction

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007231525.3 True 3061 mRNA 0.47 6 28016005 28020224

Neighbor

gene id symbol gene type direction distance location
LOC111194787 NA coding downstream 19929 27991865 ~ 27996076 (-)
LOC103046178 LOC108437989,LOC108263992,LOC108434102,LOC108263974 coding downstream 27243 27984363 ~ 27988762 (-)
gmps gmps coding downstream 264068 27719054 ~ 27751937 (-)
LOC103029583 LOC108437982,LOC108264139 coding downstream 311267 27693743 ~ 27704738 (-)
LOC107196896 NA coding downstream 595749 27419612 ~ 27420256 (-)
LOC107196860 NA coding upstream 5834 28026058 ~ 28029932 (-)
LOC103035129 NA coding upstream 21676 28041900 ~ 28046058 (-)
LOC107196884 LOC108263974,LOC108434102,LOC108437989 coding upstream 33200 28053424 ~ 28058214 (-)
LOC103045872 LOC108437986,LOC108264187,LOC108264182,LOC107676311,LOC107569153,LOC107741377 coding upstream 41544 28061768 ~ 28069140 (-)
LOC111194789 LOC108434028,LOC108434027,LOC108437985,LOC108433993 coding upstream 63710 28083934 ~ 28088385 (-)
G161147 NA non-coding downstream 236218 27778724 ~ 27779787 (-)
G161136 NA non-coding downstream 312777 27692435 ~ 27703228 (-)
LOC111194786 NA non-coding downstream 594321 27420486 ~ 27421684 (-)
G161065 NA non-coding downstream 605297 27410488 ~ 27410708 (-)
G161062 NA non-coding downstream 607671 27408072 ~ 27408334 (-)
LOC111194796 NA non-coding upstream 161391 28181615 ~ 28191026 (-)
LOC111194797 NA non-coding upstream 167772 28187996 ~ 28189702 (-)
LOC111194799 LOC108264117,LOC108434033,LOC108264121,LOC108264120 non-coding upstream 182096 28202320 ~ 28202855 (-)
G161273 NA non-coding upstream 365423 28385647 ~ 28386666 (-)
G161275 NA non-coding upstream 368339 28388563 ~ 28390456 (-)
kcnab1 kcnab1,LOC108263953,LOC107675612,LOC102797568 other downstream 437087 27429941 ~ 27578918 (-)
G160979 ccnl1,ccnl1a,LOC107710830,LOC107684610,LOC107714439,LOC107691967,LOC107563513 other downstream 896752 27109707 ~ 27119253 (-)
LOC103037634 NA other downstream 1670296 26342351 ~ 26345709 (-)
G160715 NA other downstream 2276643 25738881 ~ 25739362 (-)
LOC103041696 NA other downstream 2413293 25600660 ~ 25602712 (-)
LOC111194804 NA other upstream 573276 28593500 ~ 28652947 (-)
LOC103037190 NA other upstream 866687 28886911 ~ 28941387 (-)
G161711 NA other upstream 2295382 30315606 ~ 30325858 (-)
LOC103042221 LOC105901649,LOC107568871,LOC105028370,LOC108413244,LOC567622,LOC103367052,LOC107379323,LOC100706402,LOC101466533 other upstream 2678946 30699170 ~ 30781708 (-)
tap1 NA other upstream 4631744 32651968 ~ 32675269 (-)

Expression


Co-expression Network