mios (mios,LOC107671474,LOC107592123,LOC107592481)


Basic Information

Item Value
gene id mios
gene name mios,LOC107671474,LOC107592123,LOC107592481
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 34300018 ~ 34315224 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007242176.3
TTCTAGGTTAAAAGTCCTGCTCGTATTCGCAGCAGCGGCAGAAAGTTGACGGAGTGTTGAGGCAGTAAGTTTGGTGTTTGGCTGCGTGCGCGGTTGTGTTTAGATGTGGGTGTGAATAAACCGCGCGGTGAGGGTTAGGAGTTCAGGCTCCGGGGGAACGACGTGGTTCTGTGGAGCTTTATTCACCCGAAATGACATGTAACCGTGTGGCTTAgtttagctagtttagctaaccGGCTAACTAGCTTTAGCTGACAGTTAGCcaatagcttagcttagcttcgcTAGTGTCAACACTGTCacagtgcagcagcagcagctctctctctgaTATGAAATTTATTTATTACGTTAATTTCGCTACttaacagctattttttttacctcaggaTTGTAAGTTACTAAATGCGAGTTACAGCACTGTAGCAGTATAGCTGCTGAATTGACATGTTGTTAGTAGTGGGGTTGTAGTTAACCTAAGGTTAACTGCCTTTAACCAGAGTTAAACCAGATTAATGACAGTTATTTGTAGTTTTACTTACTTTACAATAAGAAAACAGGCTGCTGAATGATTTATCTGGCCTCAAAAGGATTGTCAGTTTTGAGTTGTACTTAGAAGACTATGTCTGGAGTGAAACAACGTAGTACATAcaatttaaacacaattaaaacgGATTATTCCTAGATATAGGAGGTATTTttaactccaaaaaaaaaaaagagtcttcATATTGATTTAGTTAgtttttattgtgatatttacTTATTAGACAATGAGTAAAGTGATAATGAGAACTATAAAACAATTATTGCAGGTATAATTTGCGAAGGATTCTAGGTTTACTTGTCGAGACATAAAAAAACGTTAGATCATGTTtggaatgagaaaaaaacaatgagaaaagtaaaaaaaaaaacctcaaaaaataagtattaaaaCATAGATTTTGGATATGTTATTactttagagaaaaaaagaaaaacaacagcctTAAAATTGATTTTGGATTTCTGgactaaaaagtgtttttataactttttagACTATATCTGGACTAAAGTAGTGAGTCGTGCAGAAGAATGCTTAGCTATTGTCAATTGAAAGTCACATACATTTGTAGTGAATAGTTGTAGTTAGttgtagaggtgggcgatatggtaaaAATGATATATTGCCCGATTTAAAAGCAATTTAATGATACGTGATGTatcaccaatttttttttttcaattctgcgtacagtgatttttatttattctctatTTCCTGCACTAACTTTTGTAATGAAATGTTCAGCAGGACAATATTTATGAAGCACTGACCGTGTTCAAGATAAAGTCAGTTACTATAAAGCATTGTCATATTGCCCGCAACTAGTTGTTGTAATGATGAGCGGTTCCAAGCCAGATATCCTGTGGTCTCCACATCACGCGGACCGCTATGTGATCTGCGATTCCGAGCTCAGTCTCTACAGAATTGGTGCTGTTGGGACTTCAGAGGCCAAAGCTGGAGCGCTGCCGCTGTCTCAGGAGACGGCAGCCACTTTGCTGGCCATCAACTCCGACACCCCGTACATGAAATGCGTGGCCTGGTACCCGAAGCACGAGCCCGAGTGTCTACTGGCTGTCGGTCAGGCCAACGGCAGAGTGGTGCTCACCAGCCTTGGCCAGAGCCACAACTCCAAATGCAAGGAGCTGGTGGGGAAGGAGTTTGTGCCCAAACATGCCAGACAGTGCAACACCCTGGCCTGGAACCCTGTGGACAGCAACTGGCTGGCAGCTGGTCTGGATAAGCACCGGGCCGACTTCTCTGTCCTGATCTGGGACATCAGCAGTAAGTATTCTCCAGAGGCCGTGCCGGCCGAGAAGCTCCGTCTGTCGGGGGATGCCGATTCCGGGATGGTGGTAACGAAGCCTCTGTATGAGCTGGGGCAGAACGACGCGTGCCTGTCCCTTTGCTGGCTGCCTCGAGACCATCAGAAGCTGCTACTGGCTGGTATGCACCGCAACCTGGCCATCTTCGACCTGCGCAACACCAGCCAGAAGACCTTCGTCAACACCAAGGCTATCCAGGGAGTGACTGTGGACCCGTACTTCCCAGACCGGGTGGCATCCTTCTTCGAAGGCCAGGTGGCAATCTGGGACCTGCGCAGGTTTGAGAAGCCCGTCTTTACATTGACTGAACAGCCCAAGCCTCTGACCAAAGTGGCCTGGTGCCCCACGAGGATGGGGCTTCTGGCTACTCTGACGCGCGACTCCAACGTCATCCGCTTATATGACATGCAGCACGCCCCCACGCCCATCGGCGATGAGACCGAGCCCACCATCATCGAGCGTGGGGTGCAGCCGTGCAGCGAGAGCGTCATCAGCAGCTTCGCGTGGCATCCGTCCACCCAGAACCGCATGGTGGTGGTGTCCCCCAACAGGGCCATGTGTGACTTCACAGTGTTCGAGCGCATCTCTCTGGCCTGGAGCTCCACCACCTCTCTAATGTGGGCGTGCGGGCGACACCTGTACGAGTGCACTGAGGAGAGCGGGGAAGGCGGAGCTGCTGAAAAGGACATTGCCACTAAGATGAGGGAGCGCGCTCAGTCGAGATACGGCCACGACACCGTCCAGCTGTGGAGGAACCACCTGCTGGCTGGAGGGAATGACCCTCACCTGAGGTCCCTCTGGTACACTTTGCACTTCATGCAGCAGTACACTGAAGATCTGGAACAGAGGCAACAGGGAAACAAGCAGTCTCTGATCTATGCAGGCATCAAGAACATTGTCAAATCCAGCTCTGGCACTACAGAGACTCGGCGCTGCTGGAAGGGTTCAGACAGGCCTACAGATGTTGCTCAGTATCACAGTGAGGAGCGCAGTCTGGCCCTGCAGCTGTGCGGCTGGATCAGCCGTGGGCCAGAAATCGATGTGGAGCCTTTCCTGAGGTCCTTGGAGCAGGAGGGCGAGTGGGAGAGAGCTGCCTCTGTTGCCCTATTTAACCTCGACATCCGTCGTGCCATTCAGATCCTCAACAAAGGAGCATCAGCGGAAAAAGGTGACCTGAACCTGAACGTGGTGGCCATGGCTCTGTCAGGCTACACGGACGAGAAGTCGTCTCTGTGGAGGGAGATGTGCAGCTCTCTCAGGCTGCAGCTGAAGAAGCCCTACCTGTGTGTGATGTTTGCTTTCCTCACCAGTGAACCGGGGTCCTACGACGCAGTGCTGTACGAGAGTCGTGTGGCTGTCCGAGACAGAGTGGCCTTCGCCTGCATGTTCCTTAATGACAATCAGCTGCCTCGTTACATAGACAAGTTGACAAACGACATGAAGGAGGCAGGAAATCTGGAGGGTGTTCTGCTGACAGGACTGACGAAAGACGGTGTGGATCTGATGGAGAGCTATGTAGATCGAACAGGAGACGTGCAGACGGCCAGTTTCTGCATGCTTAGGGGCTCCACAGCTGAGGTGGTGAAGGATCCGCGAGTGCAGTGCTGGATTGAGAACTATCGCAACCTCCTGGATGCCTGGAGGTTCTGGCACAAACGAGCTGAGTTTGACATCCACAGGAGCAAACTGGACCCCAGCTCCAAGCCTCTGGCTCAGGTGTTTGTGAGCTGTAACTTCTGTGGAAAGTCCATTTCCTTCAGCTGCTCTGCAATGCCCCACCAGGGTCGTGGCTTCAGCCAGTATGGGGTCAGTGGCTCCCCCACCAAGTCCAAAGTCACCAGCTGCCCGGGCTGCAGGAAGCCACTGCCGCGCTGTGCTCTCTGCCTGATGAACATGGGGACGCCAGTGTCCTCCTGCACAGGTCCAGGGAAGTCTGATGAGAAAGTTGATCTGCCAAGAGATAAGAAACTCGCCCAGTTTAATAACTGGTTCACCTGGTGCCACAACTGCCGCCACGGAGGCCATGCTGGCCACATGCTAAGCTGGTTCAGGGACCACAGTGAGTGTCCGGTGTCGGCCTGCACCTGCAAATGCATGCAGCTGGACACCACAGGCAAACTACAACCATCAGACTATGTATAGCGATAAAGCTGCTCAAACTCCACCTCCATTCTCCTGAGGAAGCGCACTCGTGGCAGCGGTAAGCCTATGGCAGGTTCAGGGGTACCTGCCTACCCGCCGCCTGCCAGTCTGCTGCTCCTGGCCAGCAGAGAGCTGTACGTATCTACCTCCTCAGGTTCTCCGAGACGATGCCATGGATGAGAGATGAACCATGTGGAGAGCTGGAATGAGACTGTACCAACAAATCAGAtacagagaggaagaaaaatcaGCAatatgggctttttttttttatggaacaaCTTTATTACCTCAATATTACTGACGAACACAAGCTGAATGTTAATGTTACCCACAGTACTAATCctgttcttcttcttattattattatgagggTTTTCTTGaatgttttaagtgttttcttagAACAcagtttgtgagtgtgtttattttgagcTTGTGGTAATGTTTAGAAGGGTTCTGAATCACTGAATTCCCAGGGAATTTTATTGTATACAGCTGTTTGTGACAATTATAACAACTCCACGAATGTTTTGAAGTGCCATTTTATTAACATATGCAAAAACCTGTACCCCACCAATCCGTGAAATGACAGCAAATGTTAAACAGGTGCCGGTGTACAGGATCTTTTAGTTGTGGAGAACGTTTAATACACCAACCTTACCACACACCA
>XM_022679893.1
TTCTAGGTTAAAAGTCCTGCTCGTATTCGCAGCAGCGGCAGAAAGTTGACGGAGTGTTGAGGCAGTAAGTTTGGTGTTTGGCTGCGTGCGCGGTTGTGTTTAGATGTGGGTGTGAATAAACCGCGCGGTGAGGGTTAGGAGTTCAGGCTCCGGGGGAACGACGTGGTTCTGTGGAGCTTTATTCACCCGAAATGACATGTAACCGTGTGGCTTAgtttagctagtttagctaaccGGCTAACTAGCTTTAGCTGACAGTTAGCcaatagcttagcttagcttcgcTAGTGTCAACACTGTCacagtgcagcagcagcagctctctctctgaTATGAAATTTATTTATTACGTTAATTTCGCTACttaacagctattttttttacctcaggaTTGTAAGTTACTAAATGCGAGTTACAGCACTGTAGCAGTATAGCTGCTGAATTGACATGTTGTTAGTAGTGGGGTTGTAGTTAACCTAAGGTTAACTGCCTTTAACCAGAGTTAAACCAGATTAATGACAGTTATTTGTAGTTTTACTTACTTTACAATAAGAAAACAGGCTGCTGAATGATTTATCTGGCCTCAAAAGGATTGTCAGTTTTGAGTTGTACTTAGAAGACTATGTCTGGAGTGAAACAACGTAGTACATAcaatttaaacacaattaaaacgGATTATTCCTAGATATAGGAGGTATTTttaactccaaaaaaaaaaaagagtcttcATATTGATTTAGTTAgtttttattgtgatatttacTTATTAGACAATGAGTAAAGTGATAATGAGAACTATAAAACAATTATTGCAGGTATAATTTGCGAAGGATTCTAGGTTTACTTGTCGAGACATAAAAAAACGTTAGATCATGTTtggaatgagaaaaaaacaatgagaaaagtaaaaaaaaaaacctcaaaaaataagtattaaaaCATAGATTTTGGATATGTTATTactttagagaaaaaaagaaaaacaacagcctTAAAATTGATTTTGGATTTCTGgactaaaaagtgtttttataactttttagACTATATCTGGACTAAAGTAGTGAGTCGTGCAGAAGAATGCTTAGCTATTGTCAATTGAAAGTCACATACATTTGTAGTGAATAGTTGTAGTTAGttgtagaggtgggcgatatggtaaaAATGATATATTGCCCGATTTAAAAGCAATTTAATGATACGTGATGTatcaccaatttttttttttcaattctgcgtacagtgatttttatttattctctatTTCCTGCACTAACTTTTGTAATGAAATGTTCAGCAGGACAATATTTATGAAGCACTGACCGTGTTCAAGATAAAGTCAGTTACTATAAAGCATTGTCATATTGCCCGCAACTAGTTGTTGTAATGATGAGCGGTTCCAAGCCAGATATCCTGTGGTCTCCACATCACGCGGACCGCTATGTGATCTGCGATTCCGAGCTCAGTCTCTACAGAATTGGTGCTGTTGGGACTTCAGAGGCCAAAGCTGGAGCGCTGCCGCTGTCTCAGGAGACGGCAGCCACTTTGCTGGCCATCAACTCCGACACCCCGTACATGAAATGCGTGGCCTGGTACCCGAAGCACGAGCCCGAGTGTCTACTGGCTGTCGGTCAGGCCAACGGCAGAGTGGTGCTCACCAGCCTTGGCCAGAGCCACAACTCCAAATGCAAGGAGCTGGTGGGGAAGGAGTTTGTGCCCAAACATGCCAGACAGTGCAACACCCTGGCCTGGAACCCTGTGGACAGCAACTGGCTGGCAGCTGGTCTGGATAAGCACCGGGCCGACTTCTCTGTCCTGATCTGGGACATCAGCAGTAAGTATTCTCCAGAGGCCGTGCCGGCCGAGAAGCTCCGTCTGTCGGGGGATGCCGATTCCGGGATGGTGGTAACGAAGCCTCTGTATGAGCTGGGGCAGAACGACGCGTGCCTGTCCCTTTGCTGGCTGCCTCGAGACCATCAGAAGCTGCTACTGGCTGGTATGCACCGCAACCTGGCCATCTTCGACCTGCGCAACACCAGCCAGAAGACCTTCGTCAACACCAAGGCTATCCAGGGAGTGACTGTGGACCCGTACTTCCCAGACCGGGTGGCATCCTTCTTCGAAGGCCAGGTGGCAATCTGGGACCTGCGCAGGTTTGAGAAGCCCGTCTTTACATTGACTGAACAGCCCAAGCCTCTGACCAAAGTGGCCTGGTGCCCCACGAGGATGGGGCTTCTGGCTACTCTGACGCGCGACTCCAACGTCATCCGCTTATATGACATGCAGCACGCCCCCACGCCCATCGGCGATGAGACCGAGCCCACCATCATCGAGCGTGGGGTGCAGCCGTGCAGCGAGAGCGTCATCAGCAGCTTCGCGTGGCATCCGTCCACCCAGAACCGCATGGTGGTGGTGTCCCCCAACAGGGCCATGTGTGACTTCACAGTGTTCGAGCGCATCTCTCTGGCCTGGAGCTCCACCACCTCTCTAATGTGGGCGTGCGGGCGACACCTGTACGAGTGCACTGAGGAGAGCGGGGAAGGCGGAGCTGCTGAAAAGGACATTGCCACTAAGATGAGGGAGCGCGCTCAGTCGAGATACGGCCACGACACCGTCCAGCTGTGGAGGAACCACCTGCTGGCTGGAGGGAATGACCCTCACCTGAGGTCCCTCTGGTACACTTTGCACTTCATGCAGCAGTACACTGAAGATCTGGAACAGAGGCAACAGGGAAACAAGCAGTCTCTGATCTATGCAGGCATCAAGAACATTGTCAAATCCAGCTCTGGCACTACAGAGACTCGGCGCTGCTGGAAGGGTTCAGACAGGCCTACAGATGTTGCTCAGTATCACAGTGAGGAGCGCAGTCTGGCCCTGCAGCTGTGCGGCTGGATCAGCCGTGGGCCAGAAATCGATGTGGAGCCTTTCCTGAGGTCCTTGGAGCAGGAGGGCGAGTGGGAGAGAGCTGCCTCTGTTGCCCTATTTAACCTCGACATCCGTCGTGCCATTCAGATCCTCAACAAAGGAGCATCAGCGGAAAAAGGTGACCTGAACCTGAACGTGGTGGCCATGGCTCTGTCAGGCTACACGGACGAGAAGTCGTCTCTGTGGAGGGAGATGTGCAGCTCTCTCAGGCTGCAGCTGAAGAAGCCCTACCTGTGTGTGATGTTTGCTTTCCTCACCAGTGAACCGGGGTCCTACGACGCAGTGCTGTACGAGAGTCGTGTGGCTGTCCGAGACAGAGTGGCCTTCGCCTGCATGTTCCTTAATGACAATCAGCTGCCTCGTTACATAGACAAGTTGACAAACGACATGAAGGAGGCAGGAAATCTGGAGGGTGTTCTGCTGACAGGACTGACGAAAGACGGTGTGGATCTGATGGAGAGCTATGTAGATCGAACAGGAGACGTGCAGACGGCCAGTTTCTGCATGCTTAGGGGCTCCACAGCTGAGGTGGTGAAGGATCCGCGAGTGCAGTGCTGGATTGAGAACTATCGCAACCTCCTGGATGCCTGGAGGTTCTGGCACAAACGAGCTGAGTTTGACATCCACAGGAGCAAACTGGACCCCAGCTCCAAGCCTCTGGCTCAGGTGTTTGTGAGCTGTAACTTCTGTGGAAAGTCCATTTCCTTCAGCTGCTCTGCAATGCCCCACCAGGGTCGTGGCTTCAGCCAGTATGGGGTCAGTGGCTCCCCCACCAAGTCCAAAGTCACCAGCTGCCCGGGCTGCAGGAAGCCACTGCCGCGCTGTGCTCTCTGCCTGATGAACATGGGGACGCCAGTGTCCTCCTGCACAGCAGGTCCAGGGAAGTCTGATGAGAAAGTTGATCTGCCAAGAGATAAGAAACTCGCCCAGTTTAATAACTGGTTCACCTGGTGCCACAACTGCCGCCACGGAGGCCATGCTGGCCACATGCTAAGCTGGTTCAGGGACCACAGTGAGTGTCCGGTGTCGGCCTGCACCTGCAAATGCATGCAGCTGGACACCACAGGCAAACTACAACCATCAGACTATGTATAGCGATAAAGCTGCTCAAACTCCACCTCCATTCTCCTGAGGAAGCGCACTCGTGGCAGCGGTAAGCCTATGGCAGGTTCAGGGGTACCTGCCTACCCGCCGCCTGCCAGTCTGCTGCTCCTGGCCAGCAGAGAGCTGTACGTATCTACCTCCTCAGGTTCTCCGAGACGATGCCATGGATGAGAGATGAACCATGTGGAGAGCTGGAATGAGACTGTACCAACAAATCAGAtacagagaggaagaaaaatcaGCAatatgggctttttttttttatggaacaaCTTTATTACCTCAATATTACTGACGAACACAAGCTGAATGTTAATGTTACCCACAGTACTAATCctgttcttcttcttattattattatgagggTTTTCTTGaatgttttaagtgttttcttagAACAcagtttgtgagtgtgtttattttgagcTTGTGGTAATGTTTAGAAGGGTTCTGAATCACTGAATTCCCAGGGAATTTTATTGTATACAGCTGTTTGTGACAATTATAACAACTCCACGAATGTTTTGAAGTGCCATTTTATTAACATATGCAAAAACCTGTACCCCACCAATCCGTGAAATGACAGCAAATGTTAAACAGGTGCCGGTGTACAGGATCTTTTAGTTGTGGAGAACGTTTAATACACCAACCTTACCACACACCA

Function

symbol description
mios Predicted to be involved in cellular response to amino acid starvation and positive regulation of TOR signaling. Predicted to be located in lysosomal membrane. Predicted to be active in cytoplasm. Orthologous to human MIOS (meiosis regulator for oocyte development).

NR:

description
PREDICTED: WD repeat-containing protein mio

GO: NA

KEGG:

id description
K20407 MIOS, MIO; WD repeat-containing protein mio

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007242176.3 False 4690 mRNA 0.49 11 34300018 34315224
XM_022679893.1 True 4693 mRNA 0.49 11 34300018 34315224

Neighbor

gene id symbol gene type direction distance location
LOC103027681 NA coding upstream 82215 34213886 ~ 34217803 (+)
LOC103028011 LOC108413592 coding upstream 100246 34176108 ~ 34199772 (+)
LOC111194818 LOC108413590,LOC105891915,LOC107592482,LOC108441798 coding upstream 138264 34118793 ~ 34161754 (+)
LOC103045871 cthrc1b,cthrc1,LOC108256451,LOC107726655,LOC105891862,LOC107592186,LOC107688280,LOC108413588 coding upstream 207281 34071159 ~ 34092737 (+)
LOC103027235 LOC107671459,LOC107688260,LOC108256161,LOC105891721 coding upstream 302574 33204707 ~ 33997444 (+)
LOC103044586 NA coding downstream 3989 34319213 ~ 34349880 (+)
pepd pepd coding downstream 492282 34807506 ~ 34839027 (+)
chst8 chst8,LOC108264314,LOC107668469 coding downstream 752094 35067318 ~ 35512777 (+)
kctd15 kctd15,LOC107668486,LOC107712586,LOC107594376,LOC106562374 coding downstream 1234668 35549892 ~ 35603715 (+)
lsm14a NA coding downstream 1471106 35786330 ~ 35803285 (+)
G162408 NA non-coding upstream 78682 34220112 ~ 34221336 (+)
G162405 NA non-coding upstream 96912 34202903 ~ 34203106 (+)
G162403 NA non-coding upstream 122791 34170400 ~ 34177227 (+)
G162373 NA non-coding upstream 202421 34093913 ~ 34097597 (+)
G162336 NA non-coding upstream 413174 33837477 ~ 33886844 (+)
G162442 NA non-coding downstream 84010 34399234 ~ 34399448 (+)
G162505 NA non-coding downstream 186376 34501600 ~ 34517219 (+)
G162518 NA non-coding downstream 339737 34654961 ~ 34655440 (+)
G162530 NA non-coding downstream 461983 34777207 ~ 34783691 (+)
G162533 NA non-coding downstream 477309 34792533 ~ 34792826 (+)
G162096 LOC103040777,LOC108439298,LOC108256343,LOC101172525 other upstream 1580743 32714183 ~ 32719275 (+)
G162032 NA other upstream 2004989 32236316 ~ 32295029 (+)
G162017 NA other upstream 2151828 32068862 ~ 32148190 (+)
efhb NA other upstream 2694528 31584746 ~ 31605490 (+)
hmgn2 NA other upstream 3421691 30875038 ~ 30878327 (+)
ss18l2 ss18l2,kiaa0355 other downstream 1492641 35807865 ~ 35814793 (+)
pygo1 pygo1 other downstream 1796818 36112042 ~ 36120402 (+)
ccpg1 ccpg1 other downstream 1817191 36132415 ~ 36169745 (+)
G162964 LOC108431875,LOC108413582 other downstream 2438961 36754185 ~ 36754687 (+)
LOC103046025 hcn4,LOC108263998 other downstream 2971943 37287167 ~ 37352779 (+)

Expression


Co-expression Network