LOC103021700 (LOC103021700,LOC102310173,LOC102785042,LOC102211940,LOC101470544)


Basic Information

Item Value
gene id LOC103021700
gene name LOC103021700,LOC102310173,LOC102785042,LOC102211940,LOC101470544
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 37944201 ~ 37946249 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007242261.3
GTCTCACCCACTAACCCACACAGACACTCCCCCCACATCCACTGACACACCGGCACTGCTCTCCTCAGCATCTCTGAAGagaaacacagcacacactcctGCGCTTCAGCTCGCCTGAAAGAAGAAGGTAATCAGCACGTGTTCCAGGAGAGCTCGAGCTAAATCAAGAGAACTAAGAAGGCAAAGGATACAACCAACAGAGCTGGCTGGCTTATGAGGCTTCCACGTAAAAGAAAGAGCAGTGCAGAAGaccagacagacaaacagaccatcagaagaacagaagaggagaaagaaaaaaaagaagttccTTCTTGACCAAAGTTGCCTCTTGAACAAAATATCACCAAAGATGTGAGGTGTTCTGCTTCTCCGTGCTCAGGTTTGAGGGAAGACCCACCAGAAAGTTAATCTGAAGATCACACCATGAGTTGTGTGCCTTTGTTAACTTCTCTCCACATCTCAAAAGCGGAGCTCTCCATGAGACGCAGCGTGAGATGGTTTCAATCAAAGCCTAACTGACTGGATAATATTTCTTGGACGAGGCTTTCAGCCTTTTATGCCTCCCCAGCCTGAACATTAATGCCCACGATGAAGATCTACAATTAAGCTAGATTGTTCATTTTATGGGACAGAAATGACCGCGCGAACGGTGGCAAAGTAAGTGTGAGCCGGCTGGATTGTGAGTAATTTAGGCGTTTAAAATGAAGGAATGATTGCAGTGTCTGTGTGCTGCGGGCACTTACTGCAGCCAGCATTTTTCCAGAGACTCATTTGGGCTAGTTAATGCTCCAGGGGGACACAGAGGCACGTTCTTATGGATCTGAGAGACGAGTGTGTCACCTTTAAGGGTGAGAAAGCTCCTGCTGACCACATCTCCAGCGCTCTGCTTGCCCCTAAGCCTCTGCCTTCCCCCAGCACAGCACTGAAACAGGGTCTTGCAGCTGGCTTTAAGAAGGTTCTTCGTACGGAGGAGGACAGCCCGAGTCCGTTTCCAGGTGTGCTGCCCGGCATCCTGGAGATGAGAGTCAAGGAAGGCAGCAAGATCCGCAACCTGATGGGTTTCGCCATGGCCCGGATGCAGAGCGAGTCTGGCGACAGCGGCCGGGCCGGGCTACGGCAGGTGGTGTTCGCAGGTTCGGGTCGAGCTGTCACCAAAACCATTACCTGTGCTGAAATCATGAAGAGAAAAGTGGGCGGTCTGTACCAGCTCACCAAACTACAGTACAAAGGCGTGCAGGAGGTTTGGGAGAGTCAGGAGGGAGGCGAGTCAGAGATGACCGTCCACAGGACCGTGCCCTCCATCAGTATCCTTCTGTCCAAGGACCCTCTGGACCCACTGGAACCAGGATACCAGCCCCCTGAGACCCAGTACGCTCTGTGGGAGGAGAGGGGTGGTGCGGACGTGCTACAGCCAGGAGAGAAAAGACCGTTTAAGAACAATATCAGTGAAACACATTCGAAACGATTCTGTCCTCAAGGTGGGGTCACTCTTTGAACACGTTTGAACaatggttttgttttttaagatctttttaatccatgtttttttttcactccacTGTGAATTCTATTGTGTTCCATAAAACAGCTAACAGTAGAAAACTGTTCAAAACTATTCATattaatgtacagtaaagtttaaATCTCCTCCTCTTATAAACATACCATTCAAGAGTTCCTCAAGCCTCAAAAGTCAGTCATGGAGTTGAGCACCAGAACTACGTTTCTATTTGGTCTAGATCAGTTATTCTAATCACACGTACTGCTGTGACACTGTGAATGCACAACCTCGAGGAGTGCTCCATTACTGCTATAACCTGATAAACCTTTTAAAGAGGTTGATGGCTTCATTTGTAGCCAAGCCACAAATGGCTTCActcataataaacaaaatacaaagtaaattcagcacaacacaatGTCCTCATCCCTCA

Function

NR:

description
ribonuclease P protein subunit p25-like protein

GO: NA

KEGG:

id description
K14525 RPP25; ribonucleases P/MRP protein subunit RPP25

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007242261.3 True 1937 mRNA 0.48 2 37944201 37946249

Neighbor

gene id symbol gene type direction distance location
LOC111194820 celf6 coding upstream 108301 37589985 ~ 37835900 (+)
parp6 parp6 coding upstream 437004 37455735 ~ 37507197 (+)
LOC103045107 dhdh,LOC108431994,LOC107665090,LOC106587215 coding upstream 536287 37401528 ~ 37407914 (+)
LOC103045417 NA coding upstream 544362 37387494 ~ 37399839 (+)
LOC103026877 unc13c,LOC108411445 coding upstream 682216 36970710 ~ 37261985 (+)
LOC111194723 LOC107704663 coding downstream 998153 38944402 ~ 38945904 (+)
LOC111194822 LOC107569781 coding downstream 999927 38946176 ~ 38951124 (+)
LOC111194738 LOC104947953,LOC106536897 coding downstream 1146230 39092479 ~ 39094807 (+)
LOC103046335 ch25hl1.2,LOC108435345,LOC107691130,LOC107725743,LOC107567893,LOC102790067 coding downstream 1227075 39173324 ~ 39175138 (+)
tspan3 tspan3,tspan3a,LOC107690355 coding downstream 1238973 39185222 ~ 39191405 (+)
G163161 NA non-coding upstream 395908 37548037 ~ 37548293 (+)
G163110 NA non-coding upstream 506152 37437568 ~ 37438049 (+)
G163095 NA non-coding upstream 569996 37374006 ~ 37374205 (+)
G163087 NA non-coding upstream 572353 37366118 ~ 37371848 (+)
G163071 NA non-coding upstream 643079 37300767 ~ 37301122 (+)
G163241 cox5ab,LOC107595344,LOC107713225,LOC103046663,LOC108432642,LOC107665137 non-coding downstream 18081 37964330 ~ 37977105 (+)
G163247 NA non-coding downstream 38809 37985058 ~ 37987068 (+)
G163288 NA non-coding downstream 725033 38671282 ~ 38672233 (+)
G163296 NA non-coding downstream 791470 38737719 ~ 38740775 (+)
G163297 NA non-coding downstream 796546 38742795 ~ 38744936 (+)
G163105 kpyk,LOC103044212,LOC108432067,LOC108264538,LOC106587214 other upstream 532232 37409992 ~ 37411969 (+)
LOC103046025 hcn4,LOC108263998 other upstream 591422 37287167 ~ 37352779 (+)
G162964 LOC108431875,LOC108413582 other upstream 1189514 36754185 ~ 36754687 (+)
ccpg1 ccpg1 other upstream 1774456 36132415 ~ 36169745 (+)
pygo1 pygo1 other upstream 1823799 36112042 ~ 36120402 (+)
reln reln other downstream 1628840 39575089 ~ 39788454 (+)

Expression


Co-expression Network