LOC103036856 (LOC103036856)


Basic Information

Item Value
gene id LOC103036856
gene name LOC103036856
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 5521686 ~ 5524043 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007244015.3
CTACATGcttgttcaattttaaaacaGTGAATCTGGGAGAGCGTGTGATTTTACCATGTGAGCAGGAATGTGTGTCTAATGTTAAATGGACTAAAATCACTCCTGACTACAGAGTTGTTGCACAGTTTTCAACAGGATCTGCAATTTTGAAGAAGGTGTTCAAAACAGAGTTTCAGTGTCACCTGAAAAGAACCCTTTGCTTATATTTACCTCGGCTGCATACACAGACATGGGCTCATATCAGTGCCGGTGTGATGAAAAACCAATCTGTGATGTGAGACTTACAGTTTTAGTACCTATCAGTGTTAAGGCATCTGTGTTGGACCGGGTCATTCTACCCTGCTATTGGAACACCATGAAAGACAAAGCACAGTTTCAGTGGAATATGAAAGACCAAATGGTGCTGCATTTTGAAGATGGGAAGTTGACGATGGGTAAAGACTTTGAGGAGAGGTTTTTTTACTCTGAAGAAGGTTACTGGGAGGGTAATCTGTCCCTGATCATCAACCAAGTTTGCTCATCAGATGAAGGCCTTTACCGCTGCTTTGTAAACAAAGACGATAAAGGATATCCACATTCGTACATTCTCAGCGTTGAAAACCCCAAAGATGTTCCATACTACCAAAATATCTACTTTTATACATCCGTTGTATTAGCTCTTCCCTATGGTTGTATGTTCATATTCAAGGTCTTTTCACATTGCTGTGCGAAGAATCTGAATTGCACCTGGCTGGGGAAGAAAAAACTTGCAACAAATGTGTTTCTTAAATCTGTTCGTGTTAGTTTACCCAATGAAGACTTATCATCTGAACGTAAACCATTAAATTCACATGAAACTAATCCTCACAAATCCAAGTTGAAGAGGAGAAGTAAGGGACGCCCCAACACGTGGAGTGGCAATCCTTCAATACCCTCTTTGAATGCTTACAAAAGCGATGAAAAGTAAAACGAAGATTTGCTTTAGATAGGGCACTGAGTAAAAGCAATGTTTGGTGGGCTTCACTTGGAGTGTTTCCTTAAGCTGTTTTCACACTAAAAGCTCTAAAATGTTTAAGTGTAAACTCAACAGTTTacaacataatttaaacacacaaactgcccCAAttcttccattgaaagttataaagtttttttctctcttctgttaaAATGCTGTtctggagatacatgtttttcacaaaatgaGTGGTGTCAACATGAATCATTTATGCAAACAATTAGTATCGAAACTccaatatgttatttttttgctaataCATTAATCCCTGATGAAATTAACCATGGTGGAGGTAttatggttttgtttttttgtgtgtgtttttattggttCAGTGATGTTCAATCAGTAAACTGGTGTGTGAGTAAATTT

Function

NR:

description
uncharacterized protein LOC103036856

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007244015.3 True 1369 mRNA 0.38 3 5521686 5524043

Neighbor

gene id symbol gene type direction distance location
LOC103030327 maf,LOC108428434,LOC107728098,LOC107381304,LOC108274756 coding upstream 600815 4916228 ~ 4920871 (+)
LOC103037478 LOC108434021 coding upstream 783281 4678203 ~ 4738405 (+)
LOC103029469 spon1,spon1a,LOC107741890 coding upstream 1011146 4296319 ~ 4510540 (+)
LOC103036857 LOC108433503,LOC108264854 coding upstream 1398206 4008326 ~ 4123480 (+)
LOC103036562 hipk3 coding upstream 1522224 3977752 ~ 3999462 (+)
cdyl2 cdyl2 coding downstream 12691 5536734 ~ 5597788 (+)
cenpn cenpn coding downstream 88918 5612961 ~ 5619291 (+)
atmin atmin coding downstream 97177 5621220 ~ 5630190 (+)
LOC103034771 LOC108442590 coding downstream 115205 5639248 ~ 5641113 (+)
gse1 gse1,LOC107565336,LOC107719882,LOC107661366 coding downstream 179053 5703096 ~ 6042503 (+)
G156209 NA non-coding upstream 36641 5484764 ~ 5485045 (+)
G156204 NA non-coding upstream 79687 5441738 ~ 5441999 (+)
G156202 NA non-coding upstream 194715 5326762 ~ 5326971 (+)
G156190 NA non-coding upstream 310252 5210955 ~ 5211434 (+)
G156189 NA non-coding upstream 338386 5182534 ~ 5183300 (+)
G156215 NA non-coding downstream 77062 5601105 ~ 5601659 (+)
G156225 NA non-coding downstream 78289 5602332 ~ 5611273 (+)
G156233 NA non-coding downstream 121838 5645881 ~ 5648574 (+)
G156331 NA non-coding downstream 526437 6050480 ~ 6052382 (+)
G156326 emc8,LOC106587369 non-coding downstream 532626 6056669 ~ 6061997 (+)
G156188 NA other upstream 364286 5157154 ~ 5157400 (+)
LOC103030011 LOC108433937,LOC108264032,LOC106573278,LOC106561481 other upstream 884396 4575668 ~ 4637290 (+)
LOC103025196 arl4c,LOC103025196,LOC108425959,LOC108267031,LOC107104020 other upstream 1589523 3929331 ~ 3932163 (+)
LOC111194753 NA other upstream 1907195 3611018 ~ 3614491 (+)
G155776 NA other upstream 2766574 2738361 ~ 2755112 (+)
ptprq ptprq,LOC108413201,LOC107705767,LOC107686600,LOC107564908 other downstream 1569464 7093507 ~ 7171625 (+)
LOC111194759 NA other downstream 1848333 7372376 ~ 7431568 (+)
G156840 cd9a,LOC108438826,LOC107686554,LOC107733276,LOC107559685 other downstream 2076524 7600567 ~ 7606668 (+)
G157055 NA other downstream 3045887 8569930 ~ 8570877 (+)
G157383 NA other downstream 4416786 9940829 ~ 9941805 (+)

Expression


Co-expression Network