wdr59 (wdr59,LOC107686576)


Basic Information

Item Value
gene id wdr59
gene name wdr59,LOC107686576
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 6838878 ~ 6858524 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007244036.3
TTTGTTGATGTTTTTGTCGGGGGCATCATGGCGGCCCGCTGGACCAGTGAGAATGAGGTGGTGGAGTTTAGGGACGCTCAGGCTACTGCAATGTCAGTGGACTGTCTCGGACACCATGCTGTTCTGTCTGGGAGACGCTTCTTGTATGTTGTGAACTTGGAGACTCCTTCAGAGGCTCCCCGAAAAATAGGTCGTCAGAGTAAGTGGGACGTTGGGACTGTGCAGTGGAATCCTCACAGAGCAGAAGCTCATCTGTTTGCTGCATCAAGTAATCAGCGTGTTGACCTGTATGTTTGGCGGGATGGATGTGGAGAGGCTCACAATTCTCTACAAGGTCACACACGAGTTATAAGTGATTTGGACTGGTCATGGTTTGAGCCAGAATATCTTGTGACAAGTTCTGTGGATACGTACATCTACATTTGGGACACAAGAGATACTCGAAAGCCCACAGTAGCGCTGTCTGCAGTGGCGGGAGCCTCCCAGGTGAAGTGGAACAGAAGGAATCAGAACTGCCTCGCCTCCAGTCATGATGGAGATGTCAGAATCTGGGACAGAAGGAAACCGAACACCGCTGTTGAATATGTGGCCGCTCACTTATCAAAGATCCATGGCTTGGACTGGCACCCTGATAATGAGTATATCCTTGCAACCTCCAGCCAGGACAACTCTGTTAGGTTCTGGGACTACAGACAACCTCGAAAGTACCTCAATATCTTGTCTTGTCAAGTTCCTGTTTGGAAGGCGAGATACAcgCCTTTTTCTAACGGGCTGGTGACAGTGATGGTGCCGCAGCTCAGACGGGAGAACAGTCTGCTGCTGTGGAGCACTCTGGACCTGAACAGTCCGGTTCACGCTTTCGTGGGCCATGATGACGTGGTGCTGGAGTTCCAGTGGAGGCCTCAGAAAGAAGGTTCCAAGGACTGCCAGCTTGTTACGTGGTCCAGAGATCAGACTTTGAGGATATGGAGGGTAGATCCTCAGTTACAGAAGCTGTGTGCTAATGACATTGTGGAGGAGCTGATGGAAGGCATGACCCTCACAACTGAATCAGAGAAGACACTCCGGTCCCCAGACTCTGAACCCCCGCTCAGTCCTAGCCTTACAGTAGACAACTCACAAGGTCAGATAGAGAGTCTGCAGTCTGGCCTGCTGTCCAGCGGCAGGCAGGACAGCCCTGGTCTGCCCCAGACCCTGCAGCAGGAGTTCTCTTTGGTCAACCTGCAGATCCGCAATGTCAATGTAGAGATGGATGCTTTAAACCGCACCTGCTTTGTGTCTGCTCACTGTGGAGTCAATCAGGTCAGGCTTGTGGTAAAGTTTCCGGCACAGTACCCAAACAACGCTGCACCATCTTTCCAGTTCGTCCCTCCAACTAACATTTCATCTTCCATGAAGACCAAGATCCAAAAGATCTTGACAGATACGTCACTTCAGAAAGTCAAAAGGAATCAGAACTGCCTGGAGCCCTGCGTGAGGCAGCTGGTGTCCTGTTTAGAGTCAGATATGGAGGATGGCACCAATCCCCATGCTTTTGCCAACTCGGTAACCCCAGCTCTTCCTGCCTTCCCACGCGTCACTAACACCTATGGCTCATACCAGGATGCTAATATTCCCTTCCCACGCACCTCAGGTGCACGCTTCTTTGGCACAGGATCTCTAGTGTATTTTACCAGGCCCATGTCTATGCATCGCACCGTCCCTCCTGCTGAACCCACTCCCAGGTCACTTTCAGCACTTTCTGCGTATCACAGTGGCCTAATGACACCCATGAAGATGCGCAGTGAGTCTCAGACCTCTTTGAGGCTGTACAGCGGCAGTCCTACACGCACAGATAAAGAGCACGTCTCCATCTCCTCCTTCTACTATAAGGAACGGAAGCCCCCTCTGTCTGCCCCTCGTCGCTGGTCTGTGCAGACTATTCATGACTGTCCGAAATCACGTCGTTGGAAAGGGAAACGTGAGGGAACAGACTATGGCAACAGACCTATAAAACTGGCGGGAAAAGTCATCATTCAGGAGATCTCCTGTCTGCTTCCAATCCACAAAGCCCTCGCCGAAACCTACGTATTAAATGTGAACGACATACATGACACGTGTCAAAAGAATGcagctgcagctctggcagtagGACGCAGAGATTTAGCCAAGgttTGGGCCCTTGCTTCTGCTGCTACCAGTCAAGACCTCTGCCCTGACTCGGATCCTGACGCTAACACACCTTGGGCCAGGCACCCCTTTGGACGAAAACTTCTTGCAACTTTGATTGAACACTACAGTCATCTGAGTGATGTGCAGAGTCTGGCCATGCTGTGCAGTGTGTTCAGAGGCCAGGGGAGCCCCCAGGACTTCTTCACGCTGTACGGGCCACGCTCCTCAGGCTTCACTCTACACCACTCCCGCTATCCCAGCTACACTTCCAGTTCTGTTACATCTGGCTCCTGCTCCAGTACCTCAGACTCCACCTCCACTAACTGGAACCCCActggaCGGGAATCAGAGCAGGTCCCTCCCTGGGGAGAGTCTTCCCCTGATGACTATCGCTATGCAAATCAGCTATACACAGACCCACGAGAACGTGAGAAGGAGCAGCACGACATGAACAAAAGGTTATTGGACCCAGCCAATACCTTGCAGTTTGATGACTTTAAGAAGTGTTATGGAGAAATTCTGTACCGATGGGGTCTGAAAGAGAAAAGGGCAGAGGTGCTGAAATTTGTTTCTTGTCCTCCAGAACCACATAAGGGTGTAGAGTTTGGGGTGTACTGCTGTCACTGTCGGAGTCAGGCCCGGGGCACTCAGTGTGCCGTCTGTAAACGCTTCACCTTCCAGTGTGCCATCTGCCACGTGGCTGTCCGTGGCTCCTCCAACTTCTGCCTGAGTTGTGGGCACGGCGGGCACACCAGCCACATGATGGAGTGGTTCCGCTCCCAAGAAGTGTGTCCTACGGGCTGCGGCTGCCACTGTCTCCTGCAAAGCACTTTCTGAAACCTCTACAACGTCCATCCGTCAGTCCTCGCCTCGGGATGTGCCTCAGAACTTAGAACCTTAGTACTGTAGCAGGGTTTGGTCTGCCCAGCGCAGgagaccacacactcacactgttcCTCTGTGAAAcagcactgacacacacacacacacacacatgatggCTACCAGCGCTTCTCTGGACCAGAGTGGCCGTTAATGTTTGTTATgcaaaatggaaaaagtatACAGTATGAGTTATGAAGGATTGAACACAGCCTTATTATATTGATTGTGCCATTTTTGTTCTTTCATTTTTGATTGAACTTGAACATTTAGTTTGATCTCTAAGCCaccagaagtttttttttctaaagaaacTGTGAAAGTGCACACCTGTAAAGAGAGGACTGAACCTGCTGTGGATTTTACAATTATAGTAATCTGGCTGGAGAAGTGCTTTCGTCCGCTTTGGTCAGTCTTTTCAGGACTGTGCTCGATTCTAAAAGGGAATACTGACGAATTAACCAGCATTTACAAAGTTTATGCAATAAATGCaacaataaatgtgtttaaaatga
>XM_007244037.3
TTTGTTGATGTTTTTGTCGGGGGCATCATGGCGGCCCGCTGGACCAGTGAGAATGAGGTGGTGGAGTTTAGGGACGCTCAGGCTACTGCAATGTCAGTGGACTGTCTCGGACACCATGCTGTTCTGTCTGGGAGACGCTTCTTGTATGTTGTGAACTTGGAGACTCCTTCAGAGGCTCCCCGAAAAATAGGTCGTCAGAGTAAGTGGGACGTTGGGACTGTGCAGTGGAATCCTCACAGAGCAGAAGCTCATCTGTTTGCTGCATCAAGTAATCAGCGTGTTGACCTGTATGTTTGGCGGGATGGATGTGGAGAGGCTCACAATTCTCTACAAGGTCACACACGAGTTATAAGTGATTTGGACTGGTCATGGTTTGAGCCAGAATATCTTGTGACAAGTTCTGTGGATACGTACATCTACATTTGGGACACAAGAGATACTCGAAAGCCCACAGTAGCGCTGTCTGCAGTGGCGGGAGCCTCCCAGGTGAAGTGGAACAGAAGGAATCAGAACTGCCTCGCCTCCAGTCATGATGGAGATGTCAGAATCTGGGACAGAAGGAAACCGAACACCGCTGTTGAATATGTGGCCGCTCACTTATCAAAGATCCATGGCTTGGACTGGCACCCTGATAATGAGTATATCCTTGCAACCTCCAGCCAGGACAACTCTGTTAGGTTCTGGGACTACAGACAACCTCGAAAGTACCTCAATATCTTGTCTTGTCAAGTTCCTGTTTGGAAGGCGAGATACAcgCCTTTTTCTAACGGGCTGGTGACAGTGATGGTGCCGCAGCTCAGACGGGAGAACAGTCTGCTGCTGTGGAGCACTCTGGACCTGAACAGTCCGGTTCACGCTTTCGTGGGCCATGATGACGTGGTGCTGGAGTTCCAGTGGAGGCCTCAGAAAGAAGGTTCCAAGGACTGCCAGCTTGTTACGTGGTCCAGAGATCAGACTTTGAGGATATGGAGGGTAGATCCTCAGTTACAGAAGCTGTGTGCTAATGACATTGTGGAGGAGCTGATGGAAGGCATGACCCTCACAACTGAATCAGAGAAGACACTCCGGTCCCCAGACTCTGAACCCCCGCTCAGTCCTAGCCTTACAGTAGACAACTCACAAGGTCAGATAGAGAGTCTGCAGTCTGGCCTGCTGTCCAGCGGCAGGCAGGACAGCCCTGGTCTGCCCCAGACCCTGCAGCAGGAGTTCTCTTTGGTCAACCTGCAGATCCGCAATGTCAATGTAGAGATGGATGCTTTAAACCGCACCTGCTTTGTGTCTGCTCACTGTGGAGTCAATCAGGTCAGGCTTGTGGTAAAGTTTCCGGCACAGTACCCAAACAACGCTGCACCATCTTTCCAGTTCGTCCCTCCAACTAACATTTCATCTTCCATGAAGACCAAGATCCAAAAGATCTTGACAGATACGTCACTTCAGAAAGTCAAAAGGAATCAGAACTGCCTGGAGCCCTGCGTGAGGCAGCTGGTGTCCTGTTTAGAGTCAGATATGGAGGATGGCACCAATCCCCATGCTTTTGCCAACTCGGTAACCCCAGCTCTTCCTGCCTTCCCACGCGTCACTAACACCTATGGCTCATACCAGGATGCTAATATTCCCTTCCCACGCACCTCAGGTGCACGCTTCTTTGGCACAGGATCTCTAGTGTATTTTACCAGGCCCATGTCTATGCATCGCACCGTCCCTCCTGCTGAACCCACTCCCAGGTCACTTTCAGCACTTTCTGCGTATCACAGTGGCCTAATGACACCCATGAAGATGCGCAGTGAGTCTCAGACCTCTTTGAGGCTGTACAGCGGCAGTCCTACACGCACAGATAAAGAGCACGTCTCCATCTCCTCCTTCTACTATAAGGAACGGAAATCACGTCGTTGGAAAGGGAAACGTGAGGGAACAGACTATGGCAACAGACCTATAAAACTGGCGGGAAAAGTCATCATTCAGGAGATCTCCTGTCTGCTTCCAATCCACAAAGCCCTCGCCGAAACCTACGTATTAAATGTGAACGACATACATGACACGTGTCAAAAGAATGcagctgcagctctggcagtagGACGCAGAGATTTAGCCAAGgttTGGGCCCTTGCTTCTGCTGCTACCAGTCAAGACCTCTGCCCTGACTCGGATCCTGACGCTAACACACCTTGGGCCAGGCACCCCTTTGGACGAAAACTTCTTGCAACTTTGATTGAACACTACAGTCATCTGAGTGATGTGCAGAGTCTGGCCATGCTGTGCAGTGTGTTCAGAGGCCAGGGGAGCCCCCAGGACTTCTTCACGCTGTACGGGCCACGCTCCTCAGGCTTCACTCTACACCACTCCCGCTATCCCAGCTACACTTCCAGTTCTGTTACATCTGGCTCCTGCTCCAGTACCTCAGACTCCACCTCCACTAACTGGAACCCCActggaCGGGAATCAGAGCAGGTCCCTCCCTGGGGAGAGTCTTCCCCTGATGACTATCGCTATGCAAATCAGCTATACACAGACCCACGAGAACGTGAGAAGGAGCAGCACGACATGAACAAAAGGTTATTGGACCCAGCCAATACCTTGCAGTTTGATGACTTTAAGAAGTGTTATGGAGAAATTCTGTACCGATGGGGTCTGAAAGAGAAAAGGGCAGAGGTGCTGAAATTTGTTTCTTGTCCTCCAGAACCACATAAGGGTGTAGAGTTTGGGGTGTACTGCTGTCACTGTCGGAGTCAGGCCCGGGGCACTCAGTGTGCCGTCTGTAAACGCTTCACCTTCCAGTGTGCCATCTGCCACGTGGCTGTCCGTGGCTCCTCCAACTTCTGCCTGAGTTGTGGGCACGGCGGGCACACCAGCCACATGATGGAGTGGTTCCGCTCCCAAGAAGTGTGTCCTACGGGCTGCGGCTGCCACTGTCTCCTGCAAAGCACTTTCTGAAACCTCTACAACGTCCATCCGTCAGTCCTCGCCTCGGGATGTGCCTCAGAACTTAGAACCTTAGTACTGTAGCAGGGTTTGGTCTGCCCAGCGCAGgagaccacacactcacactgttcCTCTGTGAAAcagcactgacacacacacacacacacacatgatggCTACCAGCGCTTCTCTGGACCAGAGTGGCCGTTAATGTTTGTTATgcaaaatggaaaaagtatACAGTATGAGTTATGAAGGATTGAACACAGCCTTATTATATTGATTGTGCCATTTTTGTTCTTTCATTTTTGATTGAACTTGAACATTTAGTTTGATCTCTAAGCCaccagaagtttttttttctaaagaaacTGTGAAAGTGCACACCTGTAAAGAGAGGACTGAACCTGCTGTGGATTTTACAATTATAGTAATCTGGCTGGAGAAGTGCTTTCGTCCGCTTTGGTCAGTCTTTTCAGGACTGTGCTCGATTCTAAAAGGGAATACTGACGAATTAACCAGCATTTACAAAGTTTATGCAATAAATGCaacaataaatgtgtttaaaatga

Function

symbol description
wdr59 Orthologous to human WDR59 (WD repeat domain 59).

NR:

description
PREDICTED: WD repeat-containing protein 59 isoform X1

GO: NA

KEGG:

id description
K20409 WDR59; WD repeat-containing protein 59

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007244036.3 True 3548 mRNA 0.50 27 6838878 6858524
XM_007244037.3 False 3491 mRNA 0.50 26 6838878 6858524

Neighbor

gene id symbol gene type direction distance location
cog8 cog8,LOC107686577,LOC107573089 coding upstream 10234 6823629 ~ 6828644 (+)
zdhhc7 zdhhc7,LOC108435925,LOC107705792,LOC107573093,LOC107736389,LOC107686620,LOC107662857,LOC107601043 coding upstream 21382 6808935 ~ 6817496 (+)
LOC103042367 LOC108435537,LOC105906449,LOC101169526 coding upstream 79410 6731170 ~ 6759468 (+)
gas8 gas8,LOC108276428 coding upstream 350591 6482819 ~ 6488287 (+)
dbndd1 dbndd1,dbnd1,LOC106562278 coding upstream 475729 6324821 ~ 6363149 (+)
LOC103038759 glg1,LOC107686575,LOC107705797,LOC107573092 coding downstream 13337 6871861 ~ 6930402 (+)
LOC103044721 zfhx3 coding downstream 88929 6947453 ~ 6984137 (+)
LOC103045026 LOC108424689 coding downstream 158990 7017514 ~ 7025945 (+)
LOC103039382 otogl,LOC107736094,LOC107686601,LOC107662850,LOC107600679 coding downstream 173379 7031903 ~ 7087583 (+)
washc1 wash1,LOC103045331,LOC107686618,LOC107564895 coding downstream 372403 7230927 ~ 7241982 (+)
G156523 pdpr,LOC106595780 non-coding upstream 64146 6768942 ~ 6774732 (+)
G156499 NA non-coding upstream 167684 6670921 ~ 6671194 (+)
G156451 NA non-coding upstream 337704 6499851 ~ 6501174 (+)
G156438 NA non-coding upstream 397601 6441051 ~ 6441277 (+)
G156436 NA non-coding upstream 406016 6432397 ~ 6432862 (+)
G156562 NA non-coding downstream 9736 6868260 ~ 6869564 (+)
G156623 gcsh,LOC105912338,LOC107662900,LOC100702337,LOC107564915,LOC102203905,LOC102786853 non-coding downstream 168074 7026598 ~ 7030708 (+)
G156697 ddx11,LOC107686596 non-coding downstream 387240 7245764 ~ 7248460 (+)
G156731 LOC108437702,LOC108264175 non-coding downstream 493473 7351997 ~ 7412688 (+)
G156824 utp15,LOC107559694,LOC107686557,LOC107662854 non-coding downstream 695129 7553653 ~ 7558957 (+)
G156188 NA other upstream 1681478 5157154 ~ 5157400 (+)
LOC103030011 LOC108433937,LOC108264032,LOC106573278,LOC106561481 other upstream 2201588 4575668 ~ 4637290 (+)
LOC103025196 arl4c,LOC103025196,LOC108425959,LOC108267031,LOC107104020 other upstream 2906715 3929331 ~ 3932163 (+)
LOC111194753 NA other upstream 3224387 3611018 ~ 3614491 (+)
G155776 NA other upstream 4083766 2738361 ~ 2755112 (+)
ptprq ptprq,LOC108413201,LOC107705767,LOC107686600,LOC107564908 other downstream 234983 7093507 ~ 7171625 (+)
LOC111194759 NA other downstream 513852 7372376 ~ 7431568 (+)
G156840 cd9a,LOC108438826,LOC107686554,LOC107733276,LOC107559685 other downstream 742043 7600567 ~ 7606668 (+)
G157055 NA other downstream 1711406 8569930 ~ 8570877 (+)
G157383 NA other downstream 3082305 9940829 ~ 9941805 (+)

Expression


Co-expression Network