fkbp4 (fkbp4,LOC107735478,LOC107662895,LOC107686573,LOC107705800,LOC107564896)


Basic Information

Item Value
gene id fkbp4
gene name fkbp4,LOC107735478,LOC107662895,LOC107686573,LOC107705800,LOC107564896
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 7263863 ~ 7271911 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007244043.3
GCTGCCCTTCCTTCTCCAGAATGTGCTGGTGGTAATCGCTGCTTTATAGCCGCAGCCTGGTGCTAAAGGTCTGCAGAGCTACGAGGCGGCTGCACGCTGCAGATATCTCCAAAATAACAGCATCTATCCAGCTAACGTTACACTTTAGCTAGATTCACAAAGACACGGCATAGCTTTACTGAAGCTAACTAATAACGTTATTAACTAAAGAACCAGCAGCACAGGGACACgactataataataacacaacagCGACCACCTGACTgactctgcagcagcagcagcagcccggGATTGTGGTAGATTAACTCGGGTTTGAGGATTTACTTTCACCCAGAAACCAGAAGAGCTGTGGAAGACCCTGAGAGGAGACAAACATGACTGCAGAAGAAGTTGCCAATGATGGAAACAGCATCCCTATGGAGGGAGAGGACATAACTCCTAAAAAAGATGGAGGAGTTCTGAAGTTGGTGAAAAAGGAAGGCACGGGTACAGAGCTGCCGATGACGGGAGATAAGGTGTTTGTGCACTATGTTGGTACACTGTTGGATGGCACACAGTTTGATTCCAGCCGTGATCGTGGAGAGAAGTTCTCATTTGAGTTGGGGAAAGGTCAGGTGATTAAAGCTTGGGATATTGGTGTTGCCACAATGCGCATCGGTGAGATCTGTCAATTGTTCTGCAAACCTGAGTATGCCTATGGAGCTGCTGGCAGCCCACCCAAAATCCCACCCAATTCTACCCTCATATTCCAGGTTGAATTGTTTGAGTTTCATGGTGAGGACATCACTGATGAGGAAGATGGCGGAATTGTCCGTAGAATCATAACCAAAGGAGAGGGTTACACTAAACCCAATGAGGGAGCTTCTGTGGATGTGCATCTGGAGGGCCAGTATGAGGGTCGTGTGTTCGATGATCGAGACCTGAAGTTTGAGGTGGGAGATGGAGAGAATCTTGACCTGCCGCCAGGTGTGGAGAAAGCCCTGCAGGCTATGGAGCAGGGAGAGGAGTCTTTATTCACCATCAAGCCAAAatatggATTTGGAAATACTGGATATGCCAAATTCAATATTCCTCCTGGTGCAACCCTGCAGTACAAAATCAAACTGACAGCTTTTGAAAAGGCAAAAGAATCTTGGGAGATGAACACTTGTGAGAAACTGGAGCAGAGCACAATCGTAAAAGAGAAAGGAACACAGTACTTCAAAGATGGCAAGTATAAGCAGGCAGCAGTGCAGTATAAGCGTATTGTGTCCTGGCTGGAGCATGAGTCCAGTCTGCAGGGGGAGGACGAAGAGAAGGCCAAAGCTCTGCGGTTGGCAGCTCACCTCAACCTGTCCATGTGCTACCTAAAACTACACGATCCCAACCCTGCTCTCGAAAACTGTGACAAGGCACTGGAATTGAGTGCGAATAACGAGAAGGCTCTGTTCAGGAGAGGAGAGGCGCTTTTTGTGATGAAGGAATTTGAAAGAGCAAAAGATGACTTTCAGCGTGTCATACAGCTCTACCCATCCAACAAGGCTGCAAAGAGCCAAGTGGTGCTGTGCCAGAAACACATCAAGGAGCAACACGAGAAGGACAAGCGTCTGTACGCGAACATGTTCCAGAAGTTTGCAGAAAGAGATGCTAAAAAAGAAGCAGAGCAGGCAAAGAAAGAGCCTGACAGTGCAATGGAGATCGAGGAAAATGGTGCTCAGGAGCAAACTGCAGCATAAGGAGGGTGCTAACTCtggtgtgcttgtgtgtatatttcattttttaagatatttttttgtaCCTGCTATAAATTGTTCCTCAGAGATGAGTGCGCGAGTGTGCTTGTAAATTCGAATGTCTGACCTGGATGTAGATTATCGTTTGCTTTCTGCCCTTCCTCTAGGCCTTGCTGGCAGAGTCTGCATTGAAActgtttgtaaatgtgtttgtgaGGCAGCTAGCTGGCCCAGCTTTGTACTGTGCTGCTACTCTGTGTGGCGTGAGCAAGGTGTAAGATTTGAAGGTTGTAAATGCTGACTACAGCCCTATTCATCTAATAGCCAATACTGCAGCCTTTGATTCTGGCCTGATGCCAGATTTTGGAGCATCGTTATGTAGCGCTGCTGTACTGTTTAGAACATTTTCTGTTCTGCTGGTAAACCTaaaatgcatggaaactgtCGGCAGGGCAACAagactgtttgtttttttggtattaATGATCTTTATGGTTTGTATGCATTTGATATCTATGTATTTCTATCACGGTTTACTGTCCATAGAGTTGTTGAGCTGTATGATTTGCATTCTTCTAATTGGACTTCTAACGTTTGACTCTCATGAACTCTTTATGATAAGACAACCTACACACAGGAGCTTTTCACCAAGGAGAACGTCTGAGTGACTGCACTTAATGTTTCTTCTGAGTGTAGCGCGTTTACATGAAGTTTTTACGGGCAGGTGCGGAGAACATCTCTGAACTGACCTAGTGAAACTTTTTGTTCCAGTCTGCTTTACTTTGCGTTCAACACAGTTTTGTCGAGTGTGTTAATGTTAGACCCGAGTCAACTTGGACCAGGATCCTGGATAGCAGCTTCTTCTGGAAAACAAAACCTACCCAAGTTTATGGAACAGACTGGAAATGACCATAAACATGCCTCTCAGCTGTCCTGTATTATAGACATCCCTGCTGGCAACAGATTATGTGGAAGAGCAAGAGACACACGAATGAGTAGCTCTGATCAAGTCTCACTTGCTCCACAATTTTGAATAAAAGAATAAGAGCTA
>XM_022679521.1
TCGCTGCCCTTCCTTCTCCAGAATGTGCTGGTGGTAATCGCTGCTTTATAGCCGCAGCCTGGTGCTAAAGGTCTGCAGAGCTACGAGGCGGCTGCACGCTGCAGATATCTCCAAAATAACAGCATCTATCCAGCTAACGTTACACTTTAGCTAGATTCACAAAGACACGGCATAGCTTTACTGAAGCTAACTAATAACGTTATTAACTAAAGAACCAGCAGCACAGGGACACgactataataataacacaacagCGACCACCTGACTgactctgcagcagcagcagcagcccggGATTGTGGTAGATTAACTCGGGTTTGAGGATTTACTTTCACCCAGAAACCAGAAGAGCTGTGGAAGACCCTGAGAGGAGACAAACATGACTGCAGAAGAAGTTGCCAATGATGGAAACAGCATCCCTATGGAGGGAGAGGACATAACTCCTAAAAAAGATGGAGGAGTTCTGAAGTTGGTGAAAAAGGAAGGCACGGGTACAGAGCTGCCGATGACGGGAGATAAGGTGTTTGTGCACTATGTTGGTACACTGTTGGATGGCACACAGTTTGATTCCAGCCGTGATCGTGGAGAGAAGTTCTCATTTGAGTTGGGGAAAGGTCAGGTGATTAAAGCTTGGGATATTGGTGTTGCCACAATGCGCATCGGTGAGATCTGTCAATTGTTCTGCAAACCTGAGTATGCCTATGGAGCTGCTGGCAGCCCACCCAAAATCCCACCCAATTCTACCCTCATATTCCAGGTTGAATTGTTTGAGTTTCATGGTGAGGACATCACTGATGAGGAAGATGGCGGAATTGTCCGTAGAATCATAACCAAAGGAGAGGGTTACACTAAACCCAATGAGGGAGCTTCTGTGGATGTGCATCTGGAGGGCCAGTATGAGGGTCGTGTGTTCGATGATCGAGACCTGAAGTTTGAGGTGGGAGATGGAGAGAATCTTGACCTGCCGCCAGGTGTGGAGAAAGCCCTGCAGGCTATGGAGCAGGGAGAGGAGTCTTTATTCACCATCAAGCCAAAatatggATTTGGAAATACTGGATATGCCAAATTCAATATTCCTCCTGGTGCAACCCTGCAGTACAAAATCAAACTGACAGCTTTTGAAAAGGCAAAAGAATCTTGGGAGATGAACACTTGTGAGAAACTGGAGCAGAGCACAATCGTAAAAGAGAAAGGAACACAGTACTTCAAAGATGGCAAGTATAAGCAGGCAGCAGTGCAGTATAAGCGTATTGTGTCCTGGCTGGAGCATGAGTCCAGTCTGCAGGGGGAGGACGAAGAGAAGGCCAAAGCTCTGCGGTTGGCAGCTCACCTCAACCTGTCCATGTGCTACCTAAAACTACACGATCCCAACCCTGCTCTCGAAAACTGTGACAAGGCACTGGAATTGAGTGCGAATAACGAGAAGGCTCTGTTCAGGAGAGGAGAGGCGCTTTTTGTGATGAAGGAATTTGAAAGAGCAAAAGATGACTTTCAGCGTGTCATACAGCTCTACCCATCCAACAAGGCTGCAAAGAGCCAAGTGGTGCTGTGCCAGAAACACATCAAGGAGCAACACGAGAAGGACAAGCGTCTGTACGCGAACATGTTCCAGAAGTTTGCAGAAAGAGATGCTAAAGTAAAAAGAAGCAGAGCAGGCAAAGAAAGAGCCTGACAGTGCAATGGAGATCGAGGAAAATGGTGCTCAGGAGCAAACTGCAGCATAAGGAGGGTGCTAACTCtggtgtgcttgtgtgtatatttcattttttaagatatttttttgtaCCTGCTATAAATTGTTCCTCAGAGATGAGTGCGCGAGTGTGCTTGTAAATTCGAATGTCTGACCTGGATGTAGATTATCGTTTGCTTTCTGCCCTTCCTCTAGGCCTTGCTGGCAGAGTCTGCATTGAAActgtttgtaaatgtgtttgtgaGGCAGCTAGCTGGCCCAGCTTTGTACTGTGCTGCTACTCTGTGTGGCGTGAGCAAGGTGTAAGATTTGAAGGTTGTAAATGCTGACTACAGCCCTATTCATCTAATAGCCAATACTGCAGCCTTTGATTCTGGCCTGATGCCAGATTTTGGAGCATCGTTATGTAGCGCTGCTGTACTGTTTAGAACATTTTCTGTTCTGCTGGTAAACCTaaaatgcatggaaactgtCGGCAGGGCAACAagactgtttgtttttttggtattaATGATCTTTATGGTTTGTATGCATTTGATATCTATGTATTTCTATCACGGTTTACTGTCCATAGAGTTGTTGAGCTGTATGATTTGCATTCTTCTAATTGGACTTCTAACGTTTGACTCTCATGAACTCTTTATGATAAGACAACCTACACACAGGAGCTTTTCACCAAGGAGAACGTCTGAGTGACTGCACTTAATGTTTCTTCTGAGTGTAGCGCGTTTACATGAAGTTTTTACGGGCAGGTGCGGAGAACATCTCTGAACTGACCTAGTGAAACTTTTTGTTCCAGTCTGCTTTACTTTGCGTTCAACACAGTTTTGTCGAGTGTGTTAATGTTAGACCCGAGTCAACTTGGACCAGGATCCTGGATAGCAGCTTCTTCTGGAAAACAAAACCTACCCAAGTTTATGGAACAGACTGGAAATGACCATAAACATGCCTCTCAGCTGTCCTGTATTATAGACATCCCTGCTGGCAACAGATTATGTGGAAGAGCAAGAGACACACGAATGAGTAGCTCTGATCAAGTCTCACTTGCTCCACAATTTTGAATAAAAGAATAAGAGCTA

Function

symbol description
fkbp4 Predicted to enable peptidyl-prolyl cis-trans isomerase activity. Predicted to be involved in chaperone-mediated protein folding and protein peptidyl-prolyl isomerization. Predicted to be active in cytoplasm. Orthologous to human FKBP4 (FKBP prolyl isomerase 4).

NR:

description
PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP4

GO:

id name namespace
GO:0000413 protein peptidyl-prolyl isomerization biological_process
GO:0006457 protein folding biological_process
GO:0016020 membrane cellular_component
GO:0005528 FK506 binding molecular_function
GO:0003755 peptidyl-prolyl cis-trans isomerase activity molecular_function

KEGG:

id description
K09571 FKBP4_5; FK506-binding protein 4/5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007244043.3 False 2766 mRNA 0.45 10 7263865 7271911
XM_022679521.1 True 2772 mRNA 0.45 10 7263863 7271911

Neighbor

gene id symbol gene type direction distance location
washc1 wash1,LOC103045331,LOC107686618,LOC107564895 coding upstream 21881 7230927 ~ 7241982 (+)
LOC103039382 otogl,LOC107736094,LOC107686601,LOC107662850,LOC107600679 coding upstream 176280 7031903 ~ 7087583 (+)
LOC103045026 LOC108424689 coding upstream 237918 7017514 ~ 7025945 (+)
LOC103044721 zfhx3 coding upstream 279726 6947453 ~ 6984137 (+)
LOC103038759 glg1,LOC107686575,LOC107705797,LOC107573092 coding upstream 333461 6871861 ~ 6930402 (+)
LOC103040627 NA coding downstream 3042 7274953 ~ 7315555 (+)
c2cd5 c2cd5 coding downstream 52589 7324500 ~ 7358192 (+)
LOC103040931 LOC108437435,LOC107564898,LOC107686567 coding downstream 86373 7358284 ~ 7371895 (+)
LOC103026191 dnaja2l,dnaja2,LOC103026191,LOC108438176,LOC107735561,LOC107705812,LOC107686561 coding downstream 174232 7446143 ~ 7454434 (+)
LOC103026791 NA coding downstream 253214 7525125 ~ 7540255 (+)
G156697 ddx11,LOC107686596 non-coding upstream 15403 7245764 ~ 7248460 (+)
G156623 gcsh,LOC105912338,LOC107662900,LOC100702337,LOC107564915,LOC102203905,LOC102786853 non-coding upstream 233155 7026598 ~ 7030708 (+)
G156562 NA non-coding upstream 394299 6868260 ~ 6869564 (+)
G156523 pdpr,LOC106595780 non-coding upstream 489131 6768942 ~ 6774732 (+)
G156499 NA non-coding upstream 592669 6670921 ~ 6671194 (+)
G156731 LOC108437702,LOC108264175 non-coding downstream 80086 7351997 ~ 7412688 (+)
G156824 utp15,LOC107559694,LOC107686557,LOC107662854 non-coding downstream 281742 7553653 ~ 7558957 (+)
G156856 pdp2,LOC108423909 non-coding downstream 480292 7752203 ~ 7755664 (+)
G156916 NA non-coding downstream 564844 7836755 ~ 7938030 (+)
LOC107197497 NA non-coding downstream 566815 7838726 ~ 7839633 (+)
ptprq ptprq,LOC108413201,LOC107705767,LOC107686600,LOC107564908 other upstream 92238 7093507 ~ 7171625 (+)
G156188 NA other upstream 2106463 5157154 ~ 5157400 (+)
LOC103030011 LOC108433937,LOC108264032,LOC106573278,LOC106561481 other upstream 2626573 4575668 ~ 4637290 (+)
LOC103025196 arl4c,LOC103025196,LOC108425959,LOC108267031,LOC107104020 other upstream 3331700 3929331 ~ 3932163 (+)
LOC111194753 NA other upstream 3649372 3611018 ~ 3614491 (+)
LOC111194759 NA other downstream 100465 7372376 ~ 7431568 (+)
G156840 cd9a,LOC108438826,LOC107686554,LOC107733276,LOC107559685 other downstream 328656 7600567 ~ 7606668 (+)
G157055 NA other downstream 1298019 8569930 ~ 8570877 (+)
G157383 NA other downstream 2668918 9940829 ~ 9941805 (+)
gan gan,LOC107738389,LOC107684660,LOC107722487,LOC107666225 other downstream 3300832 10572743 ~ 10591523 (+)

Expression


Co-expression Network