morf4l1 (morf4l1,LOC107596963,LOC107686360,LOC107738770,LOC107708218,LOC107672187)


Basic Information

Item Value
gene id morf4l1
gene name morf4l1,LOC107596963,LOC107686360,LOC107738770,LOC107708218,LOC107672187
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 17610877 ~ 17622128 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007249144.3
GTGAGATGAACCCGGAACACGCTCTGAATCGGTGCAGATCCTTGTTCCTGTTAGGAGGTCACATGTCCAGGGCGCCAAAATAACGCGTCAACAGAGAGCCGTAGTGCGGCGCCTTCACCGTGTCTGAATGAACCCGGAGCTGGCGATGCCTGGATTTGATTttccagatatttttattgtttaatctgTGAATGGCGCCTAAACAGGACCCTAAACCTAAATTTCAAGAAGGTGAACGAGTGCTGTGTTTTCATGGGCCATTGCTATACGAAGCTAAGTGtgtaaaaatcaatattaaGGACAAACAAGTGAAATACTTCATTCATTATAGTGGATGGAATAAGAACTGGGACGAATGGGTTCCTGAAAGCCGTGTGCTCAAATATGTGGACAGTAATctgcagaaacagaaagagCTTCAGAAGGCAAATCAagACCATTATGTTGAGGGAAGGATGAGGGGAGTCGCACCAAGCAAGAAGATAGCTGCTGTGcagcaaaaaaatgttgatgtGAAAACTAAGAAGAACAAACAAAAGACACCAGGACCTGGAGAAGGGACCAGCACAGGGGAAATGCCTCATCCACCGCGCAAGAAGAGGGCACGTGTCGACCCAACTGTAGAGAGTGAAGAGACCTTTATTAATCGTGTGGAAGTAAAGGTAAAGATACCTGAGGAGTTAAAACCATGGCTTGTAGATGACTGGGACCTGATCAccagacagaagcagCTTTTTCACCTACCTGCAAAAAAGAATGTAGATGCAGTCCTGGAGGATTATGCAAATTACAAGAAATCAAGAGGAACCTCTGATAACAAAGAATACGCTGTAAATGAAGTGGTTGCTGGCATCCGCGAGTACTTCAACGTTATGCTGGGCACACAGCTCCTCTACAAGTTTGAGAGGCCACAGTATGCCGAAATCCTGGCAAACCATCCAGACACGTCAATGTCTCAGATCTATGGAGCCCCACACCTTCTGAGGCTTTTTGTGAGAATTGGAGCCATGCTGGCGTACACACCGCTGGATGAGAAGAGTCTTGCGCTGCTTCTAAGCTACCTACAAGATTTCTTGAAGTATTTAGTGAAGAATTCATCGTCTTTGTTCAACGCCAGTGACTACGAGGTTGCCCCACCAGAGTACCACCGCAAGGCAGTGTGAACACGATGCCTGTGAGGACCTGTATTGCTGCATTTCCGTTGttcagtatttttaattttggttcttttaaaagaaaataacaaaaacatgatGACTTGCCTCCGGATTTTTTGACTAACTAAAAGGTGAATTAAGACTTTATGTAACAGTGCATTCTGTTGGACTGGTACGGTCATTGGAACGTCACTTAACTGTCcttatattcaaatatatttggTTTAATTAAACTGATACACAGAACATTGAGAAAGATGAACCATCAAAGactttcaacttttttttttttctcccattttgtttggtatgtttgtttgttaataaaTTGTTCCTTTCAAATACAGCTCTGCGGCATCCCTGGTACCATTTTTCATAATATGTAAAGAAATTCCAATATTTCTGATTCACTTTCATTTGTGTTTTGGTCATTCATtaaaatcattttctctgagGAAAACCTTTCAAA

Function

symbol description
morf4l1 Predicted to be involved in chromatin organization. Predicted to act upstream of or within chromatin organization and regulation of transcription, DNA-templated. Predicted to be located in nucleus. Predicted to be part of NuA4 histone acetyltransferase complex. Orthologous to several human genes including MORF4L1 (mortality factor 4 like 1).

NR:

description
PREDICTED: mortality factor 4-like protein 1

GO: NA

KEGG:

id description
K11339 MORF4L1, MRG15, EAF3; mortality factor 4-like protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007249144.3 True 1626 mRNA 0.42 12 17610877 17622128

Neighbor

gene id symbol gene type direction distance location
LOC103025173 pias1b,LOC108424062,LOC108264782,LOC107596961,LOC107738708 coding upstream 6328 17577392 ~ 17604549 (+)
LOC103029280 skor1 coding upstream 38960 17563875 ~ 17571917 (+)
c18h15orf61 cunh15orf61,c4h15orf61,LOC103025902,LOC107738714,LOC107583911,LOC107718314,LOC107686305,LOC107596966 coding upstream 112106 17493793 ~ 17498771 (+)
iqch NA coding upstream 117946 17458015 ~ 17492931 (+)
LOC103027004 smad3,LOC108424035,LOC105892538,LOC103353199,LOC107740443 coding upstream 163084 17425218 ~ 17447793 (+)
LOC103024336 NA coding downstream 2926 17625054 ~ 17645249 (+)
LOC103039437 tle3a,LOC108424090,LOC107596960,LOC107672253,LOC108264729 coding downstream 141563 17763691 ~ 17797748 (+)
ddb2 ddb2 coding downstream 327002 17949130 ~ 17958434 (+)
kbtbd4 kbtbd4,LOC107708223,LOC107738697,LOC107596956,LOC107672308 coding downstream 342255 17964383 ~ 17968936 (+)
LOC103029004 NA coding downstream 363865 17985993 ~ 17994370 (+)
G159028 NA non-coding upstream 11523 17596059 ~ 17599354 (+)
G159017 aagab non-coding upstream 153900 17455315 ~ 17456977 (+)
G159014 NA non-coding upstream 159545 17448832 ~ 17451332 (+)
G158991 NA non-coding upstream 326995 17283467 ~ 17283882 (+)
G158882 rpl4 non-coding upstream 433685 17173067 ~ 17177192 (+)
G159115 NA non-coding downstream 247879 17870007 ~ 17870468 (+)
G159120 kif23,LOC107686310 non-coding downstream 304860 17926988 ~ 17938088 (+)
G159122 NA non-coding downstream 320188 17942316 ~ 17946683 (+)
G159129 NA non-coding downstream 373570 17995698 ~ 17996728 (+)
G159182 NA non-coding downstream 486035 18108163 ~ 18109539 (+)
smad6 smad6,smad6b,LOC107583766,LOC107672304,LOC107596967,LOC107738716,LOC107686299 other upstream 238671 17327100 ~ 17372206 (+)
zwilch zwilch other upstream 421626 17177675 ~ 17189251 (+)
map2k1 map2k1,LOC107596971,LOC107583767,LOC107686295 other upstream 438649 17101612 ~ 17172228 (+)
LOC103031606 arih1,LOC108423892,LOC107742882,LOC107672283,LOC107549652,LOC105892496 other upstream 812477 16779506 ~ 16798400 (+)
st3gal2 st3gal2,LOC107686287,LOC106573711 other upstream 885668 16654136 ~ 16725209 (+)
rapsn rapsn other downstream 348968 17971096 ~ 17985904 (+)
necab2 necab2,LOC107694920,LOC107672281,LOC106573751 other downstream 903400 18525528 ~ 18576437 (+)
G159666 NA other downstream 2563388 20185516 ~ 20186919 (+)
G159728 NA other downstream 3114470 20736598 ~ 20737049 (+)
G159748 chd2,LOC107715217,LOC107601632,LOC107549011,LOC107715589,LOC107690375 other downstream 3387174 21009302 ~ 21011794 (+)

Expression


Co-expression Network