zwilch (zwilch)


Basic Information

Item Value
gene id zwilch
gene name zwilch
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 17177675 ~ 17189251 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007249153.3
TGTAGAAAATATTGGAGCTAGGCTACTTTTACACGTTGAACCAAGTGAACCAAGCTTAGCTAACTTAGTTAATTAACCTAACTAAAAATCTGTATTTGAATGCACGGGCATTGTTAAATAACGCGTTAAAGACGATGAGGGATACAATTATTTCAGAAGCTAACAGCTTTATTCGGTTTCTCAAgtcATGTCAGGATGACAGCAAAGACTTCTGGACCTATCAGGACAATATAAGAATATTAAAGCAAAGCAATCAGCCTATCCTCAGCATAATTGAAGGAAATCAGGTTGTCTTTATTTGCGAGGAAACGCCACCAAAGCATGAGGAGGAGGTTGCAGTAAACACTGAGGAAAACAGCCTCAATGAAGAAGTGTCTGTTAAACTGGAGCCGTTTGACATTGGGCCACTACCTCTCACCATACATAGAGCAAGGCAGCTGCTATCCTGGTACACCATGTCTCAGAACCCCAACATGCCCCAGGTGGAAGCTCATGTACTGCCCCCTCTATGGGTACGCTGTGATATGTCTGACCCGGCTGGCGTTTCCTGGCTGGGGGCAGAAACGGTCTATGCTGGAAGCAAGGCTACAGCAGTCAAACTGTATACAGTCTGTTGCAAAGGAGCAACAACAGATGAGTCTTCTTTTATGACGATGGAACAGCTTAAACAAGAGCATCAGAACAGACACAGTTCCTCAGCAGTGGGAACAAAAGGCTGGGCTGAGTACAACCTCTTTTGCTCAGTAAAGGAGGAGAGCCTGGTTATTGATTCTCAAAGCAGCGTAACTGCCTTCTTCAGATGGGTTAATGTTGACAAGGTCCTGGAGACCCCTCCTCTGTCGTCTACAGTTACTCTGCACATCAAGGTGACAGTTGGAGATATCAGGAGCCCACTGTATCAAACCTACAGAGAGCTGGAATTCCTCCTGACACTGGCTGATGGATTGAGGACTGGAGAGATTGAGTGGTTGGAACCACTGGAGACACAGTCTGCTGTGGAATTAACCAGGATGCTTATTGAAGATCTGGATAAGGTTGCAAATGCAGTCCCAGGCCAGAATTTAAAAGGATCAGAGAATCAGAAGGCCAAGACAGACTCAGTACTGGGGTATGGCACCATGCTGATGGAGAGAGGGGACCTGGACTTCACAGAGCAGCTCTGggagaggatgaggaagaGTGTGACCTCATATCAAGACATAACAGATTCTCTGAAATTAGTCATCAAAGCTGTACGGTTTGGTCAGATTAAACCGTGGGTCCATAGGGCCAGCAGCAGTTCTCTGAGTAAGCTGATAGTGCAGTCCTACCAGCAGCAGGTGGACACAGTGCCTCTCACTGGCCTCACCCCTGCCATCATGCTTCTGGAGCTGGGCCTGGACAAGATGAGGAAAGACTACATCAACTACCTTGTTGGAAAGGAGCTGACCACTCTCAACCATCTGAGCTACTACCTGAGCAGTGATGTGGACCTACAGGAGCAGGTTATAAGACTGAAGAAACTGCACCACCTGCTGGAGATCCTGGGCACCTGCAGCAGCTTCCTCAACCTGCCTCACGAGCGCCTCTTCTTCTTCACTCAGTCATGTTTGCAGTACTACAAAGCAGCACCATACAATGAAGACCATGTGTTTGAGATGCAGTTCAAACCTGCTCTCATCAGCCACTTCTACCAAACGGAGCAGCCAATGTCTTGGGGTGTGGAGGTGTCCAGTGGACAGGGCTCACGAGAGGTCAAGACCTCCTTTCATCTCAGCGATAAACCTCTGGTGGATCACATCACATTTGACTCAGATCTGCCACTGGAGGTCACAGTgagtgcagaaaatgaaaaggcTGCATATTTCAGGACTATGGTTTGCTGCAGCCTGGCCAACTTCACTTAGCAGGTGGaaactttattttgtttgcCCCATCTAGTTCTATCCTCTCCTGGATTCACAGGGCAGTAGATCTGGTACTCTGGTACTGAGATACTGACCTGCAGCCAGGAGCTGGTTGCTAGAAGAGCACATCTCCTTGGCTTTCCTCTTCCAGTTCTCAACCTGCCAATGACATTTCAGGACATGTTATCTGTacagctgagtgtgtgtgcagtacaGTTGCACAGTGCATTAGTTAACTCTGTGGTTAATTCAATACTATAACTTTTGTTACTGTCTAGGTGTGTAACCAAATGCTCAAATTGGATCAGATTGATTCACATTAATGGCAAATTtggggtaaaaaaaagtaaacaaaatttattaaaaacatattcagTTTTTTCGTAATCTGATAGAAGGCAGGAGTGTAGGAAATGATGTGCATGTGCTACAGTGGATAATGTATTGTTTATTGGTTAGGGAGGGATAAGCTACCTTATAAAGATGTACCTTTTTCAGTAAAGTCTGAACTGTGTTCAGTTCAATAATTCAGTAATACATTGGTTAAAGGGTAAACAACATGTCCTAGTCAGCGCACTCTAGTGTATATAGTACTTATTCTTCTCTCTATGAATGTCTGTGTAACAAAGCTGCAgtattcttttacatttttgctcTCTTTGAGTAATACTGATTTGCTATATTTGTAAGTGTCTTGACCGTAATAAACCTTTCTTTATGTCTATAATA
>XR_002651250.1
TGTAGAAAATATTGGAGCTAGGCTACTTTTACACGTTGAACCAAGTGAACCAAGCTTAGCTAACTTAGTTAATTAACCTAACTAAAAATCTGTATTTGAATGCACGGGCATTGTTAAATAACGCGTTAAAGACGATGAGGGATACAATTATTTCAGAAGCTAACAGCTTTATTCGGTTTCTCAAgtcATGTCAGGATGACAGCAAAGACTTCTGGACCTATCAGGACAATATAAGAATATTAAAGCAAAGCAATCAGCCTATCCTCAGCATAATTGAAGGAAATCAGGTTGTCTTTATTTGCGAGGAAACGCCACCAAAGCATGAGGAGGAGGTTGCAGTAAACACTGAGGAAAACAGCCTCAATGAAGAAGTGTCTGTTAAACTGGAGCCGTTTGACATTGGGCCACTACCTCTCACCATACATAGAGCAAGGCAGCTGCTATCCTGGTACACCATGTCTCAGAACCCCAACATGCCCCAGGTGGAAGCTCATGTACTGCCCCCTCTATGGGTACGCTGTGATATGTCTGACCCGGCTGGCGTTTCCTGGCTGGGGGCAGAAACGGTCTATGCTGGAAGCAAGGCTACAGCAGTCAAACTGTATACAGTCTGTTGCAAAGGAGCAACAACAGATGAGTCTTCTTTTATGACGATGGAACAGCTTAAACAAGAGCATCAGAACAGACACAGTTCCTCAGCAGTGGGAACAAAAGGCTGGGCTGAGTACAACCTCTTTTGCTCAGTAAAGGAGGAGAGCCTGGTTATTGATTCTCAAAGCAGCGTAACTGCCTTCTTCAGATGGGTTAATGTTGACAAGGTCCTGGAGACCCCTCCTCTGTCGTCTACAGTTACTCTGCACATCAAGGTGACAGTTGGAGATATCAGGAGCCCACTGTATCAAACCTACAGAGAGCTGGAATTCCTCCTGACACTGGCTGATGGATTGAGGACTGGAGAGATTGAGTGGTTGGAACCACTGGAGACACAGTCTGCTGTGGAATTAACCAGGATGCTTATTGAAGATCTGGATAAGGTTGCAAATGCAGTCCCAGGCCAGAATTTAAAAGGATCAGAGAATCAGAAGGCCAAGACAGACTCAGTACTGGGGTATGGCACCATGCTGATGGAGAGAGGGGACCTGGACTTCACAGAGCAGCTCTGggagaggatgaggaagaGTGTGACCTCATATCAAGACATAACAGATTCTCTGAAATTAGTCATCAAAGCTGTACGGTTTGGTCAGATTAAACCGTGGGTCCATAGGGCCAGCAGCAGTTCTCTGAGTAAGCTGATAGTGCAGTCCTACCAGCAGCAGGTGGACACAGTGCCTCTCACTGGCCTCACCCCTGCCATCATGCTTCTGGAGCTGGGCCTGGACAAGATGAGGAAAGACTACATCAACTACCTTGTTGGAAAGGAGCTGACCACTCTCAACCATCTGAGCTACTACCTGAGCAGTGATGTGGACCTACAGGAGCAGGTTATAAGACTGAAGAAACTGCACCACCTGCTGGAGATCCTGGGCACCTGCAGCAGCTTCCTCAACCTGCCTCACGAGCGCCTCTTCTTCTTCACTCAGTCATGTTTGCAGTACTACAAAGCAGCACCATACAATGAAGACCATGTGTTTGAGATGCAGTTCAAACCTGCTCTCATCAGCCACTTCTACCAAACGGAGCAGCCAATGTCTTGGGGTGTGGAGGTGTCCAGTGGACAGGGCTCACGAGAGGTCAAGACCTCCTTTCATCTCAGCGATAAACCTCTGGTGGATCACATCACATTTGACTCAGATCTGCCACTGGAGGTCACAGTgagtgcagaaaatgaaaaggcTGCATATTTCAGGACTATGGTTTGCTGCAGCCTGGCCAACTTCACTTAGCAGGGCTCGTAGGCTTTGCCCACATGGGCTCTTCCCTTTCCAGGTTACTCAGATGAGAGGGCAGAGCCATGTGGaaactttattttgtttgcCCCATCTAGTTCTATCCTCTCCTGGATTCACAGGGCAGTAGATCTGGTACTCTGGTACTGAGATACTGACCTGCAGCCAGGAGCTGGTTGCTAGAAGAGCACATCTCCTTGGCTTTCCTCTTCCAGTTCTCAACCTGCCAATGACATTTCAGGACATGTTATCTGTacagctgagtgtgtgtgcagtacaGTTGCACAGTGCATTAGTTAACTCTGTGGTTAATTCAATACTATAACTTTTGTTACTGTCTAGGTGTGTAACCAAATGCTCAAATTGGATCAGATTGATTCACATTAATGGCAAATTtggggtaaaaaaaagtaaacaaaatttattaaaaacatattcagTTTTTTCGTAATCTGATAGAAGGCAGGAGTGTAGGAAATGATGTGCATGTGCTACAGTGGATAATGTATTGTTTATTGGTTAGGGAGGGATAAGCTACCTTATAAAGATGTACCTTTTTCAGTAAAGTCTGAACTGTGTTCAGTTCAATAATTCAGTAATACATTGGTTAAAGGGTAAACAACATGTCCTAGTCAGCGCACTCTAGTGTATATAGTACTTATTCTTCTCTCTATGAATGTCTGTGTAACAAAGCTGCAgtattcttttacatttttgctcTCTTTGAGTAATACTGATTTGCTATATTTGTAAGTGTCTTGACCGTAATAAACCTTTCTTTATGTCTATAATA
>XR_002651251.1
TGTAGAAAATATTGGAGCTAGGCTACTTTTACACGTTGAACCAAGTGAACCAAGCTTAGCTAACTTAGTTAATTAACCTAACTAAAAATCTGTATTTGAATGCACGGGCATTGTTAAATAACGCGTTAAAGACGATGAGGGATACAATTATTTCAGAAGCTAACAGCTTTATTCGGTTTCTCAAgtcATGTCAGGATGACAGCAAAGACTTCTGGACCTATCAGGACAATATAAGAATATTAAAGCAAAGCAATCAGCCTATCCTCAGCATAATTGAAGGAAATCAGGTTGTCTTTATTTGCGAGGAAACGCCACCAAAGCATGAGGAGGAGGTTGCAGTAAACACTGAGGAAAACAGCCTCAATGAAGAAGTGTCTGTTAAACTGGAGCCGTTTGACATTGGGCCACTACCTCTCACCATACATAGAGCAAGGCAGCTGCTATCCTGGTACACCATGTCTCAGAACCCCAACATGCCCCAGGTGGAAGCTCATGTACTGCCCCCTCTATGGGTACGCTGTGATATGTCTGACCCGGCTGGCGTTTCCTGGCTGGGGGCAGAAACGGTCTATGCTGGAAGCAAGGCTACAGCAGTCAAACTGTATACAGTCTGTTGCAAAGGAGCAACAACAGATGAGTCTTCTTTTATGACGATGGAACAGCTTAAACAAGAGCATCAGAACAGACACAGTTCCTCAGCAGTGGGAACAAAAGGCTGGGCTGAGTACAACCTCTTTTGCTCAGTAAAGGAGGAGAGCCTGGTTATTGATTCTCAAAGCAGCGTAACTGCCTTCTTCAGATGGGTTAATGTTGACAAGGTCCTGGAGACCCCTCCTCTGTCGTCTACAGTTACTCTGCACATCAAGGTGACAGTTGGAGATATCAGGAGCCCACTGTATCAAACCTACAGAGAGCTGGAATTCCTCCTGACACTGGCTGATGGATTGAGGACTGGAGAGATTGAGTGGTTGGAACCACTGGAGACACAGTCTGCTGTGGAATTAACCAGGATGCTTATTGAAGATCTGGATAAGGTTGCAAATGCAGTCCCAGGCCAGAATTTAAAAGGATCAGAGAATCAGAAGGCCAAGACAGACTCAGTACTGGGGTATGGCACCATGCTGATGGAGAGAGGGGACCTGGACTTCACAGAGCAGCTCTGggagaggatgaggaagaGTGTGACCTCATATCAAGACATAACAGATTCTCTGAAATTAGTCATCAAAGCTGTACGGTTTGGTCAGATTAAACCGTGGGTCCATAGGGCCAGCAGCAGTTCTCTGAGTAAGCTGATAGTGCAGTCCTACCAGCAGCAGGTGGACACAGTGCCTCTCACTGGCCTCACCCCTGCCATCATGCTTCTGGAGCTGGGCCTGGACAAGATGAGGAAAGACTACATCAACTACCTTGTTGGAAAGGAGCTGACCACTCTCAACCATCTGAGCTACTACCTGAGCAGTGATGTGGACCTACAGGAGCAGGTTATAAGACTGAAGAAACTGCACCACCTGCTGGAGATCCTGGGCACCTGCAGCAGCTTCCTCAACCTGCCTCACGAGCGCCTCTTCTTCTTCACTCAGTCATGTTTGCAGTACTACAAAGCAGCACCATACAATGAAGACCATGTGTTTGAGATGCAGTTCAAACCTGCTCTCATCAGCCACTTCTACCAAACGGAGCAGCCAATGTCTTGGGGTGTGGAGGTGTCCAGTGGACAGGGCTCACGAGAGGTCAAGACCTCCTTTCATCTCAGCGATAAACCTCTGGTGGATCACATCACATTTGACTCAGATCTGCCACTGGAGGTCACAGTgagtgcagaaaatgaaaaggcTGCATATTTCAGGACTATGGTTTGCTGCAGCCTGGCCAACTTCACTTAGCAGCTGGaggggcaaacaaagaaaactccTGTTAGCGGGCTAGGCTTATGAAGTTCTTTATTCTAGACCCCCACCAAAGCCTATGTCAGTCTTACTCTCGTCTTGGTTTGCATGCCAAACCCCTACTGACAAAAATGATGGCACAGAAAGTGATCATAGATCAGGTGGaaactttattttgtttgcCCCATCTAGTTCTATCCTCTCCTGGATTCACAGGGCAGTAGATCTGGTACTCTGGTACTGAGATACTGACCTGCAGCCAGGAGCTGGTTGCTAGAAGAGCACATCTCCTTGGCTTTCCTCTTCCAGTTCTCAACCTGCCAATGACATTTCAGGACATGTTATCTGTacagctgagtgtgtgtgcagtacaGTTGCACAGTGCATTAGTTAACTCTGTGGTTAATTCAATACTATAACTTTTGTTACTGTCTAGGTGTGTAACCAAATGCTCAAATTGGATCAGATTGATTCACATTAATGGCAAATTtggggtaaaaaaaagtaaacaaaatttattaaaaacatattcagTTTTTTCGTAATCTGATAGAAGGCAGGAGTGTAGGAAATGATGTGCATGTGCTACAGTGGATAATGTATTGTTTATTGGTTAGGGAGGGATAAGCTACCTTATAAAGATGTACCTTTTTCAGTAAAGTCTGAACTGTGTTCAGTTCAATAATTCAGTAATACATTGGTTAAAGGGTAAACAACATGTCCTAGTCAGCGCACTCTAGTGTATATAGTACTTATTCTTCTCTCTATGAATGTCTGTGTAACAAAGCTGCAgtattcttttacatttttgctcTCTTTGAGTAATACTGATTTGCTATATTTGTAAGTGTCTTGACCGTAATAAACCTTTCTTTATGTCTATAATA

Function

symbol description
zwilch Predicted to be involved in mitotic spindle assembly checkpoint signaling and protein localization to kinetochore. Predicted to act upstream of or within cell division. Predicted to be located in kinetochore. Predicted to be part of RZZ complex. Orthologous to human ZWILCH (zwilch kinetochore protein).

NR:

description
protein zwilch homolog

GO:

id name namespace
GO:0007093 mitotic cell cycle checkpoint biological_process
GO:0000777 condensed chromosome kinetochore cellular_component

KEGG:

id description
K11579 ZWILCH; protein zwilch

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007249153.3 False 2615 mRNA 0.45 19 17177675 17189251
XR_002651250.1 False 2682 misc_RNA 0.45 20 17177675 17189251
XR_002651251.1 True 2776 misc_RNA 0.45 20 17177675 17189251

Neighbor

gene id symbol gene type direction distance location
rab11a rab11a,LOC105007892,LOC106591986,LOC100698633,LOC106588008,LOC103378951,LOC106562755 coding upstream 246313 16921369 ~ 16931362 (+)
slc24a1 slc24a1,LOC107738725,LOC107596980,LOC107742879,LOC107686291 coding upstream 293520 16859892 ~ 16884155 (+)
hacd3 hacd3,LOC107738726,LOC107686290,LOC107672296,LOC107596982,LOC107583769,LOC107742880 coding upstream 325216 16842661 ~ 16852459 (+)
pllp pllp coding upstream 404675 16764032 ~ 16773000 (+)
trnal-cag_11 NA coding upstream 414067 16763526 ~ 16763608 (+)
LOC107197433 NA coding downstream 105956 17295207 ~ 17301682 (+)
LOC103027004 smad3,LOC108424035,LOC105892538,LOC103353199,LOC107740443 coding downstream 235967 17425218 ~ 17447793 (+)
iqch NA coding downstream 268764 17458015 ~ 17492931 (+)
c18h15orf61 cunh15orf61,c4h15orf61,LOC103025902,LOC107738714,LOC107583911,LOC107718314,LOC107686305,LOC107596966 coding downstream 304542 17493793 ~ 17498771 (+)
LOC103029280 skor1 coding downstream 374624 17563875 ~ 17571917 (+)
G158882 rpl4 non-coding upstream 483 17173067 ~ 17177192 (+)
G158891 NA non-coding upstream 19224 17157142 ~ 17158451 (+)
G158881 NA non-coding upstream 93414 17083953 ~ 17084261 (+)
G158878 NA non-coding upstream 93937 17079112 ~ 17083738 (+)
G158877 megf11 non-coding upstream 178636 16998804 ~ 16999039 (+)
G158991 NA non-coding downstream 94216 17283467 ~ 17283882 (+)
G159014 NA non-coding downstream 259581 17448832 ~ 17451332 (+)
G159017 aagab non-coding downstream 266064 17455315 ~ 17456977 (+)
G159028 NA non-coding downstream 406808 17596059 ~ 17599354 (+)
G159115 NA non-coding downstream 680756 17870007 ~ 17870468 (+)
map2k1 map2k1,LOC107596971,LOC107583767,LOC107686295 other upstream 5447 17101612 ~ 17172228 (+)
LOC103031606 arih1,LOC108423892,LOC107742882,LOC107672283,LOC107549652,LOC105892496 other upstream 379275 16779506 ~ 16798400 (+)
st3gal2 st3gal2,LOC107686287,LOC106573711 other upstream 452466 16654136 ~ 16725209 (+)
siah1 siah1,LOC107549647,LOC107742888,LOC106573709 other upstream 606217 16542878 ~ 16571458 (+)
G158779 NA other upstream 797852 16379259 ~ 16379823 (+)
smad6 smad6,smad6b,LOC107583766,LOC107672304,LOC107596967,LOC107738716,LOC107686299 other downstream 137849 17327100 ~ 17372206 (+)
rapsn rapsn other downstream 781845 17971096 ~ 17985904 (+)
necab2 necab2,LOC107694920,LOC107672281,LOC106573751 other downstream 1336277 18525528 ~ 18576437 (+)
G159666 NA other downstream 2996265 20185516 ~ 20186919 (+)
G159728 NA other downstream 3547347 20736598 ~ 20737049 (+)

Expression


Co-expression Network