n4bp1


Basic Information

Item Value
gene id n4bp1
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 16512334 ~ 16530595 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007249184.3
AAGGAGTGGATGGATGTTCAGCTCAGTGGcttttattgtgtgtgtttgcagctGAAGCAGTGTCGTGCGCTGATGACATCAGCGGGGTTTTCCGGGTGTGAGGGGTTGTCAGATGCAGCTCGAGGTCTGAGCAAAAGTTGCGATAGGAGACATCAGCATGCTCGCGTTCAGCCGAGGAGATGAGAGGAGCCGGTGAGCGGGTCATGAAGGGGGTGAGAGAGTTGGGTTATCTCGGCTCCTGTTTATAGCGCCGTTGCCATGACCAGAGCGGACTAAACGAGTCGAGAGAAGCGGGGAAAAATGTCAACAACGCGGCCCCTCCCAGGCATGAAGCGAAACACCGAGGTAAACTACTCCGTGCCGCCGGGGAGCAGCCACTCTCCGACCCCCAGCAGACACCCAGCGGAGCCCCTGACCGTGGACGAGTTCACAGTGCACGAGGACAGAGAGACTGAGTTAAAGTGCACGAAGCCTCGAGTCGAGAAAGTTTTCCAAGTAGCGTTTACAATCATCGGCCTGCTGGACCACACTGGAGCCCACGGGAGTAAAGATTCCAGACAGATCTGGCTTCAGCTGAAGGGGAAGAAAGAGGATGTGGCGAAAGCCAAGGAATTTGTGAAAGGACTGTGTGACCCAGAGCTCAAAAAGGAGGAGAGGTATCCAGTTGATATGCACTGCATCTTTGCGGGAGCTCGTGGCCTCTTTCTGGACCGGTTGCTACGAGACACCAGCGCAGAGGTCCATGTACTGGAGCCAGGGCGGCTGAGGCTTCTCGGGCGTGCCGAAGCCGTGGTGATGGCGCAGAGCCGCGTTCAGCAGTTCGTCACTCTTTTTCAAGAGAAACGCAGCTTGCCCGCTGACCGAGAGCCCTTGGTCAAGCGcacttttaagacttttgtaGAAGAGCGGGCAGATAAGTACACTATGGAATTGCTACTTCTGCCCAGCCCCCTAAAGGAGGAGCTCCTGGGCTTGGTGCAGAGGCCCACTCAGACTGATGCTATTATAGACCTGGATCAGGACCGCTCTCAGACCAGCACTCCTGTCACAGAACTCTCTAATCGTATCCTTGGAGCTACTTTCGAGGATAGAACGGCCAGACCCACACAAGACTTGGTGCTTAACGGACGGCCCACGCACAAAAGACGCTCATCAGAAAGTGAGCAGAGGGACACCAAGAGACAATACTCTCTGGAGAGGAGAGATGAAGAGCAGGACAGGGATAGGCAATATGAGGCCAGCCAGACACGGACCAAAACTCCTGCCAAAGGCACTCTACCACTGGAATCCATTGAGATTTTGGACGAAGGTGAGGCTGTGAGCCCAGAGACAAATCTGCGCTGCCTGGTGAACTTCTTTAGGAACATGGGCTACCAGCAAGAGGTGGTGGAGCGTGTGGTGAGGGAGACGGGGCAAACGGAGGACACTTACCTGCTGTTGGAGCGCATTGTTCAGGAGAGCCAGAGAAGCCCGGGCATGCAAGGAGTACAGTACACCTCAGGCTACGCAACTGATTCTTCTCCGTCTTTCAACACCAGCTCTATCTCCACCTCAACATCCACATATGCACAAGCTAAAGAGAAGGAGCGGTTGCAGGAGCGGGTGCAGGAGCGGGTGCAGGGCCGTGCTCTTACTGAGATCAAGTCCAAAGACAATATCAGGGTGCTCAGCACTAACGGCTTCAACCAGAAGAGGCAGCAGGCCATCATAGTTTTGGACGACGAGGAGGATGAAGACATAGGCAGAAAGTCTAGAACCGTGGGGCCGCTAGATCTCAAGTCTGACTCCAGGTTTGGTTACTTGGCGCGGGGTGGTTCTCAGACAGTGGGGCGCGTTCCTATGGAGACCGTGACCATGCTCCGCAGCTCATCACAAGGCCCTCCTGGTACAGAGACACGACCAAGCTGCTCCTACCAGACTATTGCTGGAAGGGTACTACTGCCTCACCCTGAGCCAACTGCACTTTCAAAACCCTTGCTTCTGACAGGGGTGTCTCGCTTTCAGCAGTCCTTACAGACACCATATAGGTTGGTCTTGCCGAATGAACCTGGCCGCCCCGAACTCCGACACATCATCATAGATGGCAGCAACGTGGCTATGGCACATGGACTACATCGAATGTTTTCCTGTCGTGGGATCGCCATCGCAGTGGAGGCGTTTTGGCAGAGGGGGCATCGAGAGATTACAGTTTTTGTACCCCAGTGGAGGCAAAAGAAAGACCCAACAGTAACTGAGCCACACTTTCTTAATCAGCTTGAGGATTTGCGATtactctccttcactccttccAGAGAAGTGTGTGGAAAAAGGATCTCCTCACATGATGACAGGTTCCTACTTCATTTAGCAGAGAAGACAGGAGGCGTTATTGTCACCAATGACAACATGAGGGATTTTGTCAAACAGTCTGATGCCTGGAGGCAGATCATCCAGGAGAGATTGCTTCAGTTCACCTTTGTTGGAGATCACTTCATGATCCCAGATGATCCTTTGGGAAGGTTTGGCCCTTCGTTAGAGCACTTCCTGCACAAGGATAGCCAACTAAGTCCTATGGCAGACCTACAAGTCATTCCCATGACTTATTCCCAGACACTTCCATCAGCAACACACGGCCCTTTCCCCTCGCAGCCCAGACAGCCTTCCCATTGGCCGCATTCTGGCCCACCCGACTGGCACCCACCTCGACCGTCCTCCTCTCCTCCCCCTTCTCAGCGGTCACCCTTAGAAACCACAGAGCTCAAGAGGAAGTTATATGACATCTTCCCCGACCACAAGCAGCGCATCGACTCCATCCTCAATGATAACCCGTACATGAGAGACCTGAACGCACTGTCAGGCCTCCTGCTGGGCTGAGCACTACACTTCGCTctgaaatgaacatttttaaaattaaagctttTGAATGTTATAAAATCTACAGTCCAAGTGGCGAATATTCAGTGTACATATTTATAAGAAGAAACATTACTCATAATTTATgttgtaaacaaacacaaaagacGAAATCTTTGTTCTAAAAGGTGTTTTAGCCACACAGCTGCTTTTTTGTTTGAAACTGGCTTTGCTACAGTAACTGGTGAAGGACTCTCAACTTAacgttctttttttctgtctttatttaatttcctgtttttggtatgtttgcCAGTTCATGGACAACATATTGATCTGTTTTGAGTAGCCTCATTGATTCTTGTTTTCTTGTAGTGTACAGTAGGCTGTAAAATAGAGTATATTGATTAAAGTGCCCCCACTGAAGTGCCCTGAGAATCTGGAGAGTACGGACCTGCTCACTTGATCTCCCACTCTTTTACAATGTATAGTTCTTCAGGGGTAATGAAGGAGTAAGCGTTTGTCTGGACACCCCACCCAAATGATGCAGttttatcttcttcttttttatatataatggaGTACATTCTGAACGCTTTAAAAGTTTCTCAGTACTTAGTATCATTACACAATTTTTTCTTGGTACTCCCTCTTCCTTCTCTGGATTGTGCAACGCTTCCATGTTACCTTGAGTGATTTCAAATGTGAAACTGCTGTGCTGACCTAAATTTCTTTATCAGTGATTAAGTTCACCAGCAGGGGGCAGTGTGAGTGTAAAACATCTTGACCAGCGTTTGCCACAATGTCTGTACTGATATCTGAACAGCACCTAGCATGTACAGTTGCCACTACAATGGATTTATTGCACAACCTGTCACAGTGTCTGTGTTCCCTTCCTGTTGATATTTTTGCTGTCTTGATTATGTGCAGCAGTGCTCTTAAGTTGAGGATATCTATGATTTGGGATTTACAGGATTTGTCTAGAACAGGGAAATGAAAAGACCTCAAACAGTAAGCAGCAGATTATCCAGGTGAGCTGTGGGTATCTCACAGCAAGACTGTGCTGGTTTTCTTTTCTGAATGGCAGTGTTAATAAAGGCCATTTATGTGTTTACTGTACACAGACTCTGTGTATTTTACTCTCAGGGCAAAAAACATGTAGTTACAACACACAAAAAGCTGATAAACTGTGGAAACCTAAGCTAAATCACTCAATTTCAatcttttgtattgttttaaatcaaGTTAAAAGAAGTAGtagttgatttattgatttattcatgTTGGGCACATGCATGTCAATTTCAGGCCATAAAACCTccccacacacatttttttgttttccctgCTTGGACTTATGCCAGagcatatttattttgtaattgtaatatatGCTTTTGCTATAAACACATTTGAATGCCTGCAA

Function

NR:

description
NEDD4-binding protein 1

GO:

id name namespace
GO:0032435 negative regulation of proteasomal ubiquitin-dependent protein catabolic process biological_process
GO:0031397 negative regulation of protein ubiquitination biological_process
GO:0016605 PML body cellular_component
GO:0005730 nucleolus cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007249184.3 True 4258 mRNA 0.48 7 16512334 16530595

Neighbor

gene id symbol gene type direction distance location
LOC107197482 LOC102776007 coding upstream 1025 16506896 ~ 16511309 (+)
cbln1 cbln1,LOC107549644,LOC107583779 coding upstream 227290 16274679 ~ 16285044 (+)
LOC111194834 NA coding upstream 275371 16236180 ~ 16236963 (+)
LOC103038143 NA coding upstream 544244 15960149 ~ 15968090 (+)
rspry1 rspry1,LOC107583786,LOC107672266 coding upstream 552928 15947586 ~ 15959406 (+)
trnal-cag_11 NA coding downstream 232931 16763526 ~ 16763608 (+)
pllp pllp coding downstream 233437 16764032 ~ 16773000 (+)
hacd3 hacd3,LOC107738726,LOC107686290,LOC107672296,LOC107596982,LOC107583769,LOC107742880 coding downstream 312066 16842661 ~ 16852459 (+)
slc24a1 slc24a1,LOC107738725,LOC107596980,LOC107742879,LOC107686291 coding downstream 329297 16859892 ~ 16884155 (+)
rab11a rab11a,LOC105007892,LOC106591986,LOC100698633,LOC106588008,LOC103378951,LOC106562755 coding downstream 390774 16921369 ~ 16931362 (+)
G158776 NA non-coding upstream 221327 16290776 ~ 16291007 (+)
LOC111194770 NA non-coding upstream 525586 15969286 ~ 15986748 (+)
G158652 NA non-coding upstream 532965 15979026 ~ 15979369 (+)
G158651 NA non-coding upstream 533388 15976852 ~ 15978946 (+)
G158644 fam192a non-coding upstream 570072 15936078 ~ 15942262 (+)
G158786 lonp2 non-coding downstream 44089 16574684 ~ 16575374 (+)
G158793 NA non-coding downstream 57332 16587927 ~ 16588472 (+)
G158823 aars non-coding downstream 197861 16728456 ~ 16730115 (+)
G158818 NA non-coding downstream 207877 16738472 ~ 16738877 (+)
G158837 arl2bp,LOC107549653,LOC107686354,LOC107672193 non-coding downstream 244085 16774680 ~ 16777218 (+)
G158779 NA other upstream 132511 16379259 ~ 16379823 (+)
LOC103041352 NA other upstream 736168 15775424 ~ 15776166 (+)
LOC107197617 NA other upstream 740389 15771295 ~ 15771945 (+)
LOC103041858 NA other upstream 743673 15768055 ~ 15768661 (+)
c18h11orf16 NA other upstream 1196782 15306212 ~ 15315552 (+)
siah1 siah1,LOC107549647,LOC107742888,LOC106573709 other downstream 12283 16542878 ~ 16571458 (+)
st3gal2 st3gal2,LOC107686287,LOC106573711 other downstream 123541 16654136 ~ 16725209 (+)
LOC103031606 arih1,LOC108423892,LOC107742882,LOC107672283,LOC107549652,LOC105892496 other downstream 248911 16779506 ~ 16798400 (+)
map2k1 map2k1,LOC107596971,LOC107583767,LOC107686295 other downstream 571017 17101612 ~ 17172228 (+)
zwilch zwilch other downstream 647080 17177675 ~ 17189251 (+)

Expression


Co-expression Network