LOC103043506 (LOC108423614)


Basic Information

Item Value
gene id LOC103043506
gene name LOC108423614
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 15678723 ~ 15688714 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007249208.2
AGTGCGCAGCACCTGGCAATCTTTCTCAGTCTCAGTCTGAAGAGCAGCGATGTTGAGAGGAGTACTGCTCACCCTGTGGCTGACCACTGCCTCTGTTTGGACGGTGCCGACACAGACAGACTCTAGTCCTGTGGTGGCTCTGAAGCAAGGCAGTGTGCGTGGTCAGAATGTGAAAGTGGAAGGCTCTGAGAAAACAGTGGAGCAGTACCTGGGCATTCCTTTCGCTCAGCCACCCGTGGGTCCTCTCCGTCTGGTTGCACCCAAACTTGCAGAGCCctgggagggggagagagatgCCACTCAGCACCCACCTGTGTGTCTTCAAGACCTGGAGAGTCTGGTATCAGTGTCCAAAATGTTGGGCTTGACCTTCCCTACCACTACTGCATCAGAAGATTGTCTGTATTTGAATGTGTACACTCCAGCTCAACGCTCAGCATCAGAGAAATTACCTGTAATGTTCTGGATCCATGGCGGGGGTCTGTACATGGGTGGAGCCCTTCAGTATGATGGATCAGTGCTGGCAGCCTATGAGAATATAGTGGTTGTTGTCATTCAGTATAGGCTGGGCATACTGGGATACTTCAGCACTGGAGATGAGCATGCCCGTGGCAACTGGGGCTTTTTGGATCAGATTGCAGCGCTGCAGTGGGTGCAGCAGAATATTGAGAGTTTTGGAGGAGATCCCCAGTCTGTCACTATTGCTGGAGAGTCTGCAGGAGGGATCAGTACCTCTATGCTGACCCTGTCCCCACTGGCCAAAGGTCTTTTTCACCGAACCATCTTCCAGAGCGGAGCAGCAACCCTGGGAACCTACTCTACCAAACATCCCATGGTCTTTGCCAAGgctgtGGCAAATGTCACAGATTGTGATGCCAGCTCTACAGAGCTGCTGGTCAAGTGTTTGAGAGAAAAGACAGAAGAGGACATTGTAAAAGCAACCAAAAAGGAAAAAATCTTCCTGGGATCCACAGTGGACGGAGAGTTTATGACAGAAACAGCAGAGGAAATTTTGAAGAGCAAAAACTTCCCAAAAATTCCAGTGCTTTTAGGAGTGACAAACCATGAGTTTGGGTGGATTCTGCCTGTAACCTTTGCTCCTCCAGGGTGGGAGAAAGGGATGGACAGACGGGTGGTGGCTGCAGTGATGGGGCAGTTTTTCCCAGATGGGGCATCAGGAGCCAATGAGCTCATAATAGATGAATACCTGAAAGATGCAAAAACTCCAGAGGATGTAAGAGATGGTTTTACTGAGATATTGGGGGATCAGTTCATGGTGTTTCCTGTCATGAAAGTGGCTAAATATCACAGAGACGCTGGAGCAGACGTGTACATGTATGAGTTTCAGCATCGGCCAGAGATCTTCAAAGAGACCCGACCCAGCTTTGTGAAGGCTGATCATGCTGATGATGTGGGATTTGTGTTTGGGGCCTGCTTTTGGAAGAATCAAGTCAAAATGACCGGCACAGTCAGTGAAGAGGAAAAACAACTGTGCAAAACCATGATGCGATACTGGGGCAATTTTGTGCGAACAGGTTCACCAAACGGACCTGGCTTGGTAAACTGGCCCATGTTCGATCAGTCCAATGAGTATTTGAACCTAGGAGTGCAGCAGACAGCGGGACAAGGAATGAGACAGAACAGACTGCACTTCATAAACGTTGAGCTGCCCCAGAAGCTCGCTGCCTTACACTCAAGCTAAAAAGCTGCTTTGTTTTCTAGTACCAGTAACACTGGCTTTCTACTACAGTGGTAATAGAACAGGGAAGAGTTTTCTAAAAATGTATTGGTGTTGAGATCATCTTTGCTGGTAGAGATGTTTGTTTGGCTTTTTAAGAATGGTCTTTATTCTGAGAAGTTTTTGGAAGAACTGACCCATTTGCTCATTACTAAACATTGGTTTTCTATGTATATGATCATAAATAGATTTATATACCCG

Function

NR:

description
PREDICTED: carboxylesterase 5A-like

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016787 hydrolase activity molecular_function

KEGG:

id description
K03927 CES2; carboxylesterase 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007249208.2 True 1939 mRNA 0.48 13 15678723 15688714

Neighbor

gene id symbol gene type direction distance location
LOC103031192 LOC108423591,LOC105018602,LOC103466747,LOC108229128 coding upstream 177510 15482444 ~ 15501213 (+)
chtf8 chtf8,LOC107583916,LOC107569647 coding upstream 302559 15373349 ~ 15376164 (+)
LOC103046975 NA coding upstream 331614 15342494 ~ 15347109 (+)
LOC111194727 NA coding upstream 343721 15333873 ~ 15335002 (+)
LOC103021723 LOC108426425 coding upstream 347393 15321270 ~ 15331330 (+)
kiaa0513 kiaa0513,LOC107740318,LOC107583795 coding downstream 2789 15691503 ~ 15717211 (+)
c18h16orf70 c4h16orf70,clg19h16orf70,si:dkey-102f14.5,LOC103042166,LOC107686270,LOC106573725,LOC105892482 coding downstream 49274 15737988 ~ 15750462 (+)
nup93 nup93,LOC107549634 coding downstream 89011 15777725 ~ 15804576 (+)
slc12a3 slc12a3,LOC107583876 coding downstream 119475 15808189 ~ 15822339 (+)
herpud1 NA coding downstream 135005 15823719 ~ 15833040 (+)
G158582 NA non-coding upstream 93729 15583441 ~ 15584994 (+)
G158580 NA non-coding upstream 106385 15571534 ~ 15572338 (+)
G158576 NA non-coding upstream 174679 15503526 ~ 15504044 (+)
G158565 zc3h18,LOC107672267 non-coding upstream 217717 15452216 ~ 15461006 (+)
G158555 NA non-coding upstream 285558 15391659 ~ 15393165 (+)
G158624 NA non-coding downstream 83512 15772226 ~ 15772440 (+)
G158627 NA non-coding downstream 118605 15807319 ~ 15807533 (+)
G158640 NA non-coding downstream 218439 15907153 ~ 15907900 (+)
G158641 NA non-coding downstream 220289 15909003 ~ 15909291 (+)
G158644 fam192a non-coding downstream 247364 15936078 ~ 15942262 (+)
c18h11orf16 NA other upstream 363171 15306212 ~ 15315552 (+)
LOC111194769 NA other upstream 541453 15128368 ~ 15137270 (+)
G158369 NA other upstream 628005 15050222 ~ 15050718 (+)
LOC103042073 LOC103042073,LOC108418727 other upstream 1698698 13973821 ~ 13980025 (+)
LOC107197649 LOC108416831 other upstream 1936223 13733945 ~ 13742500 (+)
LOC103041858 NA other downstream 79341 15768055 ~ 15768661 (+)
LOC107197617 NA other downstream 82581 15771295 ~ 15771945 (+)
LOC103041352 NA other downstream 86710 15775424 ~ 15776166 (+)
G158779 NA other downstream 690545 16379259 ~ 16379823 (+)
siah1 siah1,LOC107549647,LOC107742888,LOC106573709 other downstream 854164 16542878 ~ 16571458 (+)

Expression


Co-expression Network