Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000012_12128962_12130578 |
| gene name | ITPRIP |
| gene type | coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000012 |
| NCBI id | null |
| chromosome length | 13770000 |
| location | 12128446 ~ 12132127 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| symbol | description |
|---|---|
| itprip | Predicted to be located in nuclear outer membrane. Predicted to be active in membrane. Orthologous to human ITPRIP (inositol 1,4,5-trisphosphate receptor interacting protein). |
| id | name | namespace |
|---|---|---|
| GO:0005576 | extracellular region | cellular_component |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000012_12128962_12130578.mRNA | True | 3682 | mRNA | 0.39 | 1 | 12128446 | 12132127 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000012_12054427_12060390 | TIAL1 | coding | upstream | 68056 | 12054427 ~ 12060390 (+) |
| CI01000012_12016924_12024791 | MCMBP | coding | upstream | 103411 | 12016924 ~ 12025035 (+) |
| CI01000012_11995593_12005292 | CGAT2, CSGALNACT2 | coding | upstream | 123094 | 11995593 ~ 12005352 (+) |
| CI01000012_11981083_11993407 | RET | coding | upstream | 134353 | 11981083 ~ 11994093 (+) |
| CI01000012_11932267_11962143 | NA | coding | upstream | 166238 | 11932267 ~ 11962208 (+) |
| CI01000012_12159352_12162539 | NA | coding | downstream | 26521 | 12158648 ~ 12162839 (+) |
| CI01000012_12173747_12212480 | VCLA, VCL | coding | downstream | 41261 | 12173388 ~ 12213285 (+) |
| CI01000012_12220568_12234927 | NA | coding | downstream | 87871 | 12219998 ~ 12235263 (+) |
| CI01000012_12270454_12276521 | NA | coding | downstream | 138219 | 12270346 ~ 12276625 (+) |
| CI01000012_12292583_12371612 | ADK, ADKA | coding | downstream | 160456 | 12292583 ~ 12371612 (+) |
| G76306 | NA | non-coding | upstream | 17800 | 12110427 ~ 12110646 (+) |
| G76299 | NA | non-coding | upstream | 51322 | 12076910 ~ 12077124 (+) |
| G76293 | NA | non-coding | upstream | 59280 | 12068838 ~ 12069166 (+) |
| G76290 | NA | non-coding | upstream | 83133 | 12045077 ~ 12045313 (+) |
| G76220 | NA | non-coding | upstream | 84261 | 12043779 ~ 12044185 (+) |
| G76315 | NA | non-coding | downstream | 32056 | 12164183 ~ 12164411 (+) |
| G76316 | NA | non-coding | downstream | 32834 | 12164961 ~ 12165232 (+) |
| G76318 | NA | non-coding | downstream | 36041 | 12168168 ~ 12168455 (+) |
| G76327 | NA | non-coding | downstream | 300772 | 12432899 ~ 12433158 (+) |
| G76222 | NA | non-coding | downstream | 301542 | 12433669 ~ 12435061 (+) |
| G75533 | NA | other | upstream | 982707 | 11144817 ~ 11145739 (+) |
| CI01000012_10223957_10235955 | NA | other | upstream | 1904159 | 10223697 ~ 10236276 (+) |
| G73578 | NA | other | upstream | 3760819 | 8366806 ~ 8367627 (+) |
| CI01000012_07806089_07811902 | BEND3 | other | upstream | 4320591 | 7805248 ~ 7811902 (+) |
| CI01000012_05923216_05928055 | SRD5A2B | other | upstream | 6204141 | 5922385 ~ 5929186 (+) |
| G76385 | NA | other | downstream | 498628 | 12630755 ~ 12675666 (+) |
| G76374 | NA | other | downstream | 613404 | 12745531 ~ 12749169 (+) |
| CI01000012_13029637_13033226 | RGS17 | other | downstream | 883379 | 13029435 ~ 13038899 (+) |
| G76645 | NA | other | downstream | 1519732 | 13651859 ~ 13652234 (+) |
| G76656 | NA | other | downstream | 1571360 | 13703487 ~ 13739731 (+) |
| species | gene id | symbol | gene type | chromosome | NCBI id | location |
|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | XLOC_006631 | itprip | coding | NC_007124.7 | CM002897.2 | 25403413 ~ 25408387 (-) |
