uri1 (uri1)


Basic Information

Item Value
gene id uri1
gene name uri1
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 13666685 ~ 13675380 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007250523.3
GCGCGGCGGGTCACGTGTCTTCGCTGTGTTTTTGTTGGGGGACGGACATGGCGCAGACGGACGGACATTGCTGAGGGGATTGCACGCACATAAGCAGAGGAATAATTTTGGAAGAGGAAGATTTTGTGCGATGCGAGTGTGAAATGGTCTCAATCTCGATTTGGACCGTTTCTATCGCCTCATTTATGACTAAAAGGACGCCAGGGCTGAGGAATACGTTCACTGGCATTCATAAACATTTCTATAGGACTTCAAACCCCTGAGtgcggtggtggtggtggtggtggtggtggataTACCCAATCAATCTGTGCTTGTGTGAGATACAGGAGGCCCACGGGACGCAATGGCTGGAAATATGAACGCAAATTATGATCTTCCGCAGGGTGTAGAGAGGCTGAAAGAGGAGCACAGAAAGGTGGTGAAAGACTGCAAAGGACAGATAACACATTGGAAAAAAGTGGAGAAAGACTATGAAAGCTTGCAAGAGCGCCTTGTCACTTTACCCGATAAGCTATCTTATGATATAATGGTACCTTTTGGCCCTTTGGCTTTCATGCCTGGAAAGCTGGTTCACACCAATGAGCTCACAGTTCTCCTTGGAGATAACTGGTTTGCAAAGTGCTCTGCTAAGCAGGCTGAGACGCTTGTAGAACACAGAAAGAAACatgtaaaaaataaacttgaTGATTTGCACAAAGTCATGAAAAACTTTCAAAGCAGAGCAGGCTTCACAGaagatctggaaaaaatgactaaTGATAATGGGGATTTTGTGGACATTAAAGAGAAGGTGGAAGAAGAGGAAGCTGGAACCAAAGGTAAGCATCGTGTGGCCCACAAGCCCAAGTCCAAGCCTAAAGAAGAGTATGTGGTGCAGTTAGAAGAGGAGagggaagaggaagaagaagaagcagaaggagAAGATGGAGAGAGCAGTAAAAGAGTGTTGTCTGAGGAGGAACTGTGGGCTCGGCTTGATGAGCTGGAGCGCATGGAGGATGAGCAGGATGAGCGAGACAGAATGGACAGCACAGACACTAATGGAGAGGACACTAGTTCATCTTCatcagaggaagaaaaagaagcagaggcTGGCAGAGAAGCTCAAGTCAATGGTCAGAGCCAGTGTGAGAACCAGGCTTCTGTTTCGCATATAGTCCAGGTCAACGGCATCGCCAAGCCACAGCATGATGAAGAGGCAAAggaagatgatgatgaggaggaggaaggcAGCAGCCTGCCAACTATCTACTTCTGTCACACAGTTGAGCCCAAAAAAGTGCGAATAAACACTGGAAAGAACACCACTCTGAAGTTCAGTGATAGAAAAGAGCAGAAACAACAAGGAAAgcgtaaaaagaaaaatggcaaAACCAACAGCCACTCGATTCAAGAGCATCATAAGATCACAAGTCCTTCTGATATCTACAGGGTATTTGTGGATGTGCTGAATGGCGAGCTTGTCCCGAGGAAGTCCATTCTAAAGTCACGCAGTCGAGAGAACAGTGTGTGCAGTGACACTAGTGAAAGCAGCACAGCAGATTTTGAAGAGCGGCGCACCTTTTTCGGCCGTGCACAAAGCCATGACGATGCCACCCACAGTGATGCCAGTGATGGGATTACCGAAGAGGACAGCCCTAGCATAAGCCTTTACCCTAATGGACGCTTTGAGGCTTTTTCAGGCACAGTGGTCGAGAAAGATCCACTGCCCTCATCTATTCCTCACCTGACCATCGCCCCTCCAGCCCTGCCCACCATCCCTGAAAGGAAGCAGGAAGAAGTGAGCTCAGAAGTGCCCCAGGAGCCCATTAAAAGGGTGTCGAAATTCAAAGCTGCTCGACTGCAGCAGAAGTGACCATCGTTCCCCAAAGTCTAATGGTTtctttcctttcatttttttattctgaagaAGCTCTTTTTTTGTATGGCTAACACTTGCAGGCTACATTCTTTATCTGTGCTGCTGTGCTTTACTGTCTTTCTTGAGTCTGTTCAGTGTGTTTCTACTGAATTTGCTCTGTGTGCTATGCATCTTAACATATCTTGctttttttggtcttttaaGGGTAATGGCAGTGGGAGGTGTTGCCCAGCACAACCTTGCGCAGTGTCTCTTCTCTGCTATATTGTCCTAGCACTTTGTTTGTGGCAACTTGTCCACCTATTCATACATCCTTCTCATTCCTCATCTGCCTTGTGTGTTCCTGCAGACCACTTAAGTGAACATAGAAATTAGATTTCTAATGCTACCAATTTCTTTAAATAAGTTATGTGGTCTAATTGATTCACTAGATGCTGTGAAGACCTGCCTCACCCTTgagatgttttgtttatttcatcaGCTCTCACTCTGCTTTACCTTCTTTATTCTTTCTATTTAGTTCATTTTCCACATGTTTTGCTCTGTCTCCAGTTTTTGAATGTAGACCAGCTTTTTGTGACCGCCTTCAAAtgttgttaactggaaagaaaataaataattttgccAAGAAAATA

Function

symbol description
uri1 Predicted to enable chromatin binding activity; phosphatase inhibitor activity; and transcription corepressor activity. Predicted to be involved in negative regulation of phosphatase activity and negative regulation of transcription by RNA polymerase II. Orthologous to human URI1 (URI1 prefoldin like chaperone).

NR:

description
unconventional prefoldin RPB5 interactor 1-like

GO:

id name namespace
GO:0006457 protein folding biological_process
GO:0016272 prefoldin complex cellular_component
GO:0051082 unfolded protein binding molecular_function

KEGG:

id description
K17560 URI1; unconventional prefoldin RPB5 interactor 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007250523.3 True 2499 mRNA 0.45 11 13666685 13675380

Neighbor

gene id symbol gene type direction distance location
spata2l NA coding upstream 2352 13659930 ~ 13664333 (+)
vps9d1 vps9d1 coding upstream 18910 13618688 ~ 13647775 (+)
mlycd mlycd,LOC107583902,LOC107722462 coding upstream 866310 12783799 ~ 12800375 (+)
utp4 utp4 coding upstream 1142573 12515462 ~ 12524112 (+)
LOC103032257 tspan9a,LOC108414266,LOC105018129,LOC107672591,LOC107738414,LOC107587031,LOC107559293,LOC106573177 coding upstream 1332770 12031136 ~ 12333915 (+)
cry1 cry1,cry1ab,LOC107672239,LOC108426403,LOC103023024 coding downstream 285675 13961055 ~ 13972324 (+)
LOC103042895 LOC108425440,LOC107740436,LOC107583921,LOC107672215,LOC107749314,LOC107553958 coding downstream 332635 14008015 ~ 14022424 (+)
LOC103043515 LOC108419231,LOC105022153 coding downstream 384423 14059803 ~ 14075538 (+)
LOC103047487 slc17a8,LOC107672209,LOC107583818,LOC107553956 coding downstream 555100 14230480 ~ 14247822 (+)
nr1h4 nr1h4,LOC106573302,LOC106561422,LOC107672305 coding downstream 577016 14252396 ~ 14277266 (+)
G157943 NA non-coding upstream 321221 13275460 ~ 13345464 (+)
G157933 cdh13,LOC107684661,LOC107722459 non-coding upstream 684214 12974488 ~ 12982471 (+)
G157926 NA non-coding upstream 804029 12862389 ~ 12862656 (+)
G157920 zgc:173742,LOC108415671,LOC107684664,LOC107553995,LOC107749320,LOC108264272 non-coding upstream 908596 12741848 ~ 12758089 (+)
G157905 NA non-coding upstream 1005577 12655809 ~ 12661108 (+)
G158023 NA non-coding downstream 173262 13848642 ~ 13849299 (+)
G158045 mterf2 non-coding downstream 308566 13983946 ~ 13987158 (+)
G158038 ric8b non-coding downstream 413086 14088466 ~ 14092532 (+)
G158068 NA non-coding downstream 440939 14116319 ~ 14116843 (+)
G158085 NA non-coding downstream 474106 14149486 ~ 14150489 (+)
hsbp1 hsbp1,hsbp1b,LOC107583924,LOC107553992,LOC107670150,LOC107749299 other upstream 925683 12735519 ~ 12741002 (+)
LOC103031933 ttc38,LOC103031933,LOC108414465,LOC104940279,LOC106573176,LOC100694777,LOC107722483,LOC107673144 other upstream 1299915 12340006 ~ 12366770 (+)
hipk2 hipk2,LOC107722467 other upstream 2523214 11031065 ~ 11143471 (+)
LOC103038570 cs012,zgc:112052,LOC103038570,LOC107666220,LOC108424746,LOC107587048,LOC107683025,LOC103371715 other upstream 2911987 10751699 ~ 10754698 (+)
klhl36 klhl36,LOC107684687,LOC107722460,LOC107666227 other upstream 2952703 10700788 ~ 10713982 (+)
LOC107197649 LOC108416831 other downstream 58565 13733945 ~ 13742500 (+)
LOC103042073 LOC103042073,LOC108418727 other downstream 298441 13973821 ~ 13980025 (+)
G158369 NA other downstream 1374842 15050222 ~ 15050718 (+)
LOC111194769 NA other downstream 1452988 15128368 ~ 15137270 (+)
c18h11orf16 NA other downstream 1630832 15306212 ~ 15315552 (+)

Expression


Co-expression Network