nudt4 (nudt4,LOC107553971,LOC107740279,LOC107672310,LOC107686239,LOC105898052)


Basic Information

Item Value
gene id nudt4
gene name nudt4,LOC107553971,LOC107740279,LOC107672310,LOC107686239,LOC105898052
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 14323212 ~ 14342320 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007250559.3
tgtaaaggaggaggagtaggagaaaTCAGCaccagaagagagagaagatcaGGGGAAGAAGTGGTGGTcgtgctcctcctcctcctccctcctccGTCCTTTACGCCACTACTCGTTCTTTTCACCCGGCCCAGGAGCTCGTTTCAGCGGCTGCGCAGTGCTGCTGATCCGCGGTAAGGAGAGAGGAGCCATGGGGGGCGAGAGAGCGCCGGTGGcaccgcagcagcagcagcagcagcttcagttCTTCTCCTCAGCTTCAGAATAAACCAGCTGGACCTGGAGGAACCTCGTGGAGAACTGGAGGGGTAGTGTGTAAGGAAAGTCTGGGTGTTAGAAagactttttttctccttcttcttcttatttttcaCCTGTAGCCAGTTAGTTCTATCTGAGGAGGATCCCAAAAACTGGAATACATGATGAAATTTAAGCCAAACCAGACAAGGACGTACGATGGGGAGGGCTTCAAGAAACGGGCGGCATGCCTGTGCTTCAAGAACGACAGGGAAGACGAGGTGCTGCTTGTGAGCAGCAGTCGGCACCCAGACCAGTGGATTGTTCCAGGAGGGGGAATGGAGCCAGAGGAGGAGCCGTGTGGAGCTGCTGTGAGAGAAGTCTATGAAGAGGCTGGTGTAAGGGGCACGCTTGGCAGGCTCCTGGGGGTTTTTGAGCAGAACCAGGACAGCAAGCATCGAACCTATGTGTATGTGCTTACAGTAACAGAGACACTGGAGGACTGGGAAGACTCTGTTAACATTGGTCGTAAAAGAAAGTGGTTTAAGATTGACGAGGCTATCCGGGTGCTGCAGTGCCACAAGCCAGTCCACGCGGAATACCTCCGCAGACTCACCCCTCGCTGTGGCCCCACCAATGGCAACAGTCAGGAGCCCACAGCCCTGGACAACAACGCCCCCCTCCACCAAAGCACCTCACAGGACTGCACAGGTCTGCCCCGCTTACACAGATAGAACTGCCAACAGGGGGCAGCTGTGCACCACACACAGGAATTTCTCTTTGGACTGGAAAAAGACTCTTTTTGCATGTATTGTTTCCATGTTTACTATttgagaaatgttttttaaatcgTTGAGAAATCAGAGGAGAGCCTGCCTCTGACTTTTGCCTCAAGCTTGTAGTGTGTATAGATTTTCATTTTTCTGCAAGACAGTTTGACACAGCCAAACAAGAGGATGTTGGAATTGAGCTGAAAGTGAAAGCTACAGTGACACTGGTGGACATTTCGGATCGTGATCTGTGGATGGAATTACGAAGAGGTAAAGAGAAAGAGCTGAGATGACTGCTGGATTTATAGTGTTATTTATTCATGGTTTGAGTggtggtttaaaaaaatgaatctttAGATAAGAACAGGATAATAAagatgtgcaaaaaaatactttatgtaCAAATTCACAACCAAATTgccaaaaaatgatttttttttaagctattttcTTCCGAAAAATTCTgaaagttcattattatttgacTGAGCTTGGTGCCTTTAAAAGCAGTCAACACTCTTACGCATCCTCAAGTTCACTGGGATGTGCCTCTGATTGCTTTAGAAGACTTTAGTGCTATTTTTTGCCTATGTTCTAAATCTAAAATGCTGTAAGTTGTTTTCACGGGTTGATCTTAAATGTGAACTCAACCTATTAAACAGCTGTTTATTAACTGCT
>XM_007250560.3
gtaaaggaggaggagtaggagaaaTCAGCaccagaagagagagaagatcaGGGGAAGAAGTGGTGGTcgtgctcctcctcctcctccctcctccGTCCTTTACGCCACTACTCGTTCTTTTCACCCGGCCCAGGAGCTCGTTTCAGCGGCTGCGCAGTGCTGCTGATCCGCGGTAAGGAGAGAGGAGCCATGGGGGGCGAGAGAGCGCCGGTGGcaccgcagcagcagcagcagcagcttcagttCTTCTCCTCAGCTTCAGAATAAACCAGCTGGACCTGGAGGAACCTCGTGGAGAACTGGAGGGGTAGTGTGTAAGGAAAGTCTGGGTGTTAGAAagactttttttctccttcttcttcttatttttcaCCTGTAGCCAGTTAGTTCTATCTGAGGAGGATCCCAAAAACTGGAATACATGATGAAATTTAAGCCAAACCAGACAAGGACGTACGATGGGGAGGGCTTCAAGAAACGGGCGGCATGCCTGTGCTTCAAGAACGACAGGGAAGACGAGGTGCTGCTTGTGAGCAGCAGTCGGCACCCAGACCAGTGGATTGTTCCAGGAGGGGGAATGGAGCCAGAGGAGGAGCCGTGTGGAGCTGCTGTGAGAGAAGTCTATGAAGAGGCTGGTGTAAGGGGCACGCTTGGCAGGCTCCTGGGGGTTTTTGAGAACCAGGACAGCAAGCATCGAACCTATGTGTATGTGCTTACAGTAACAGAGACACTGGAGGACTGGGAAGACTCTGTTAACATTGGTCGTAAAAGAAAGTGGTTTAAGATTGACGAGGCTATCCGGGTGCTGCAGTGCCACAAGCCAGTCCACGCGGAATACCTCCGCAGACTCACCCCTCGCTGTGGCCCCACCAATGGCAACAGTCAGGAGCCCACAGCCCTGGACAACAACGCCCCCCTCCACCAAAGCACCTCACAGGACTGCACAGGTCTGCCCCGCTTACACAGATAGAACTGCCAACAGGGGGCAGCTGTGCACCACACACAGGAATTTCTCTTTGGACTGGAAAAAGACTCTTTTTGCATGTATTGTTTCCATGTTTACTATttgagaaatgttttttaaatcgTTGAGAAATCAGAGGAGAGCCTGCCTCTGACTTTTGCCTCAAGCTTGTAGTGTGTATAGATTTTCATTTTTCTGCAAGACAGTTTGACACAGCCAAACAAGAGGATGTTGGAATTGAGCTGAAAGTGAAAGCTACAGTGACACTGGTGGACATTTCGGATCGTGATCTGTGGATGGAATTACGAAGAGGTAAAGAGAAAGAGCTGAGATGACTGCTGGATTTATAGTGTTATTTATTCATGGTTTGAGTggtggtttaaaaaaatgaatctttAGATAAGAACAGGATAATAAagatgtgcaaaaaaatactttatgtaCAAATTCACAACCAAATTgccaaaaaatgatttttttttaagctattttcTTCCGAAAAATTCTgaaagttcattattatttgacTGAGCTTGGTGCCTTTAAAAGCAGTCAACACTCTTACGCATCCTCAAGTTCACTGGGATGTGCCTCTGATTGCTTTAGAAGACTTTAGTGCTATTTTTTGCCTATGTTCTAAATCTAAAATGCTGTAAGTTGTTTTCACGGGTTGATCTTAAATGTGAACTCAACCTATTAAACAGCTGTTTATTAACTGCT
>XM_015606160.2
TTTAAGCCAAACCAGACAAGGACGTACGATGGGGAGGGCTTCAAGAAACGGGCGGCATGCCTGTGCTTCAAGAACGACAGGGAAGACGAGAAACTTGTGGATCCGTGGATCGGTCGTAACACCAGCACAGAAAGTTATGAACAGTCATCCCACAGTCAGAGCTGCTGAAAAAGACGTCACATTTCAGACCGTGTGAAATAGAGTGCTCAcagctgtgtgttgtgttgcaTCTCACAGAAGGTGCTGCTTGTGAGCAGCAGTCGGCACCCAGACCAGTGGATTGTTCCAGGAGGGGGAATGGAGCCAGAGGAGGAGCCGTGTGGAGCTGCTGTGAGAGAAGTCTATGAAGAGGCTGGTGTAAGGGGCACGCTTGGCAGGCTCCTGGGGGTTTTTGAGCAGAACCAGGACAGCAAGCATCGAACCTATGTGTATGTGCTTACAGTAACAGAGACACTGGAGGACTGGGAAGACTCTGTTAACATTGGTCGTAAAAGAAAGTGGTTTAAGATTGACGAGGCTATCCGGGTGCTGCAGTGCCACAAGCCAGTCCACGCGGAATACCTCCGCAGACTCACCCCTCGCTGTGGCCCCACCAATGGCAACAGTCAGGAGCCCACAGCCCTGGACAACAACGCCCCCCTCCACCAAAGCACCTCACAGGACTGCACAGGTCTGCCCCGCTTACACAGATAGAACTGCCAACAGGGGGCAGCTGTGCACCACACACAGGAATTTCTCTTTGGACTGGAAAAAGACTCTTTTTGCATGTATTGTTTCCATGTTTACTATttgagaaatgttttttaaatcgTTGAGAAATCAGAGGAGAGCCTGCCTCTGACTTTTGCCTCAAGCTTGTAGTGTGTATAGATTTTCATTTTTCTGCAAGACAGTTTGACACAGCCAAACAAGAGGATGTTGGAATTGAGCTGAAAGTGAAAGCTACAGTGACACTGGTGGACATTTCGGATCGTGATCTGTGGATGGAATTACGAAGAGGTAAAGAGAAAGAGCTGAGATGACTGCTGGATTTATAGTGTTATTTATTCATGGTTTGAGTggtggtttaaaaaaatgaatctttAGATAAGAACAGGATAATAAagatgtgcaaaaaaatactttatgtaCAAATTCACAACCAAATTgccaaaaaatgatttttttttaagctattttcTTCCGAAAAATTCTgaaagttcattattatttgacTGAGCTTGGTGCCTTTAAAAGCAGTCAACACTCTTACGCATCCTCAAGTTCACTGGGATGTGCCTCTGATTGCTTTAGAAGACTTTAGTGCTATTTTTTGCCTATGTTCTAAATCTAAAATGCTGTAAGTTGTTTTCACGGGTTGATCTTAAATGTGAACTCAACCTATTAAACAGCTGTTTATTAACTGCT
>XM_022679644.1
ACATCATAGGAAGTCCAGTTGTAAAGGTGCTGCTTGTGAGCAGCAGTCGGCACCCAGACCAGTGGATTGTTCCAGGAGGGGGAATGGAGCCAGAGGAGGAGCCGTGTGGAGCTGCTGTGAGAGAAGTCTATGAAGAGGCTGGTGTAAGGGGCACGCTTGGCAGGCTCCTGGGGGTTTTTGAGCAGAACCAGGACAGCAAGCATCGAACCTATGTGTATGTGCTTACAGTAACAGAGACACTGGAGGACTGGGAAGACTCTGTTAACATTGGTCGTAAAAGAAAGTGGTTTAAGATTGACGAGGCTATCCGGGTGCTGCAGTGCCACAAGCCAGTCCACGCGGAATACCTCCGCAGACTCACCCCTCGCTGTGGCCCCACCAATGGCAACAGTCAGGAGCCCACAGCCCTGGACAACAACGCCCCCCTCCACCAAAGCACCTCACAGGACTGCACAGGTCTGCCCCGCTTACACAGATAGAACTGCCAACAGGGGGCAGCTGTGCACCACACACAGGAATTTCTCTTTGGACTGGAAAAAGACTCTTTTTGCATGTATTGTTTCCATGTTTACTATttgagaaatgttttttaaatcgTTGAGAAATCAGAGGAGAGCCTGCCTCTGACTTTTGCCTCAAGCTTGTAGTGTGTATAGATTTTCATTTTTCTGCAAGACAGTTTGACACAGCCAAACAAGAGGATGTTGGAATTGAGCTGAAAGTGAAAGCTACAGTGACACTGGTGGACATTTCGGATCGTGATCTGTGGATGGAATTACGAAGAGGTAAAGAGAAAGAGCTGAGATGACTGCTGGATTTATAGTGTTATTTATTCATGGTTTGAGTggtggtttaaaaaaatgaatctttAGATAAGAACAGGATAATAAagatgtgcaaaaaaatactttatgtaCAAATTCACAACCAAATTgccaaaaaatgatttttttttaagctattttcTTCCGAAAAATTCTgaaagttcattattatttgacTGAGCTTGGTGCCTTTAAAAGCAGTCAACACTCTTACGCATCCTCAAGTTCACTGGGATGTGCCTCTGATTGCTTTAGAAGACTTTAGTGCTATTTTTTGCCTATGTTCTAAATCTAAAATGCTGTAAGTTGTTTTCACGGGTTGATCTTAAATGTGAACTCAACCTATTAAACAGCTGTTTATTAACTGCT

Function

symbol description
nudt4 Enables diphosphoinositol-polyphosphate diphosphatase activity. Predicted to be involved in diphosphoinositol polyphosphate metabolic process and nucleotide catabolic process. Located in cytosol.

NR:

description
PREDICTED: diphosphoinositol polyphosphate phosphohydrolase 2 isoform X1

GO:

id name namespace
GO:0016787 hydrolase activity molecular_function

KEGG:

id description
K07766 E3.6.1.52; diphosphoinositol-polyphosphate diphosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007250559.3 True 1688 mRNA 0.47 5 14323212 14342320
XM_007250560.3 False 1684 mRNA 0.47 5 14323213 14342320
XM_015606160.2 False 1407 mRNA 0.45 6 14323643 14342320
XM_022679644.1 False 1193 mRNA 0.44 5 14324939 14342320

Neighbor

gene id symbol gene type direction distance location
ube2n ube2na,ube2nb,ube2n,LOC105897570,LOC107707098,LOC107658971,LOC106609528 coding upstream 1354 14308368 ~ 14321858 (+)
LOC103046676 LOC108430366 coding upstream 21812 14280899 ~ 14301400 (+)
nr1h4 nr1h4,LOC106573302,LOC106561422,LOC107672305 coding upstream 45946 14252396 ~ 14277266 (+)
LOC103047487 slc17a8,LOC107672209,LOC107583818,LOC107553956 coding upstream 75390 14230480 ~ 14247822 (+)
LOC103043515 LOC108419231,LOC105022153 coding upstream 247674 14059803 ~ 14075538 (+)
eea1 eea1 coding downstream 1419 14343739 ~ 14374803 (+)
LOC103025600 itpr2 coding downstream 63261 14405581 ~ 14514146 (+)
bhlhe41 bhlhe41 coding downstream 191408 14533728 ~ 14539364 (+)
LOC103026424 ctsd,LOC107686244,LOC107672285,LOC107740314 coding downstream 204487 14546807 ~ 14557263 (+)
lrriq1 NA coding downstream 246138 14588458 ~ 14632192 (+)
G158093 ppfibp1 non-coding upstream 133170 14168959 ~ 14190042 (+)
G158086 endouc,LOC108425714,LOC107749311,LOC107686338,LOC107672228 non-coding upstream 166179 14151418 ~ 14157033 (+)
G158085 NA non-coding upstream 172723 14149486 ~ 14150489 (+)
G158068 NA non-coding upstream 206369 14116319 ~ 14116843 (+)
G158038 ric8b non-coding upstream 230680 14088466 ~ 14092532 (+)
G158238 NA non-coding downstream 218330 14560650 ~ 14562131 (+)
G158335 NA non-coding downstream 568638 14910958 ~ 14919932 (+)
G158357 NA non-coding downstream 636423 14978743 ~ 14980092 (+)
G158359 NA non-coding downstream 665185 15007505 ~ 15008083 (+)
G158381 NA non-coding downstream 727466 15069786 ~ 15070409 (+)
LOC103042073 LOC103042073,LOC108418727 other upstream 343187 13973821 ~ 13980025 (+)
LOC107197649 LOC108416831 other upstream 580712 13733945 ~ 13742500 (+)
hsbp1 hsbp1,hsbp1b,LOC107583924,LOC107553992,LOC107670150,LOC107749299 other upstream 1582210 12735519 ~ 12741002 (+)
LOC103031933 ttc38,LOC103031933,LOC108414465,LOC104940279,LOC106573176,LOC100694777,LOC107722483,LOC107673144 other upstream 1956442 12340006 ~ 12366770 (+)
hipk2 hipk2,LOC107722467 other upstream 3179741 11031065 ~ 11143471 (+)
G158369 NA other downstream 707902 15050222 ~ 15050718 (+)
LOC111194769 NA other downstream 786048 15128368 ~ 15137270 (+)
c18h11orf16 NA other downstream 963892 15306212 ~ 15315552 (+)
LOC103041858 NA other downstream 1425735 15768055 ~ 15768661 (+)
LOC107197617 NA other downstream 1428975 15771295 ~ 15771945 (+)

Expression


Co-expression Network