LOC103035018 (grm3,LOC108444204,LOC108263977,LOC107671160,LOC107665551,LOC107559415)


Basic Information

Item Value
gene id LOC103035018
gene name grm3,LOC108444204,LOC108263977,LOC107671160,LOC107665551,LOC107559415
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 10465789 ~ 10529492 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007250942.3
cactctcgctctctctctctttctctctctctctcatcctgtCCACTGCGCGCGGCTCTCAGCACTGGCGGACTTTCTCGtgcgctctctctctggtgAAGGTAGGAGCCCCCGCAGTATCTCGGGACCCCCAGCCCCGCGGGACTCAGCTCGGATTATCCCGGACACTTTTGGCGGAGGCTCTCGCTGTTCTCCAGCTTTGCGCGGCGGAGCGCGAGGATCCTGCACGCGATCTAGCTTCACCAGAAACAAAGTGCAGGTGTTAAGCTGACTCCCCCCATAGCGTATCTTCATGTGTGATCAGACAGAACTCTCAGTGTCCACTCCATGGCTCTCCCCTGCCTCTGACACCCCctcctcaccctctctctccctcataaaGCGCTAATCGGCCTTGCTGCTTGCTCCGTCTCCTCGTAACCATGTCATCCGCAGTCCGAGCTCTGCTGCTTGTGCTGCTAGGAGCCGGGGTCCTGCTGTCCAGTGGCGACTCTCCCCGCCGAGAGATTAAGATAGACGGGGATCTGGTGCTGGGAGGCCTCTTCCCCATTCACGAGAAGGGCCTGGGCATGGACGAGTGCGGCCGCATCAACGAGGACCGGGGCATCCAGCGGCTGGAGGCCATGCTCTTCGCTATAGACCAGATCAATCGGGATGTCAGCCTGCTGCCGGGTGTGGTCCTGGGAGTCCATATTTTGGACACGTGCTCAAGGGACACCTACGCACTGGAACAAGCCCTGGAGTTCGTCAGAGCCTCGCTGACCAAGGTGGACGACACCGAGTTCATCTGCCCTGACGGCTCCTACGCCTTCCAAGAGGACAGTCCACTGGCTATTGCTGGGGTCATCGGAGGCTCCTACAGCAGTGTATCCATACAGGTTGCCAACTTGTTGCGCCTCTTCCAGATCCCTCAGATCAGCTACGCCTCCACCAGTGCTAAGCTCAGCGACAAATCGCGCTACGACTACTTCGCTCGTACCGTCCCTCCAGACTTCTACCAGGCGAAGGCCATGGCTGAGATCCTGCGTGCCTTTAACTGGACGTACGTCTCCACTGTGGCCTCTGAGGGTGACTACGGCGAGACAGGCATAGAGGCCTTTGAGCAGGAAGCCCGTTTGCGGAACATATGCATCGCTACATCAGAAAAGGTGGGCCGCTCTAATGCTAAGCGCTCCTCGTACGAGGCAGTGGTGCGGCAACTCCTGCAGAAGCCTACGGCGCGTGTGGTGGTGCTCTTCCTGCGCAGCGACGATGCCCGTGAGCTCCTGGGAGCTGCCACTCGCCTCAACGCCTCATTCCTTTGGGTGGCCAGTGATGGCTGGGGGGCGCAAGAGAGCATCGTCAAAGGTAGCGAGTTTGCAGCTGATGGCGCCATCACCCTGGAGCTGGCTGCTCATCCTATCCCCGACTTCAACCAGTACTTCCAAAGCCTCAATCCGCGCAACAACCACCGGAACCCGTGGTACAGAGACTTCTGGGAACAGAAGTTCCAGTGTTCTTTAGGCGGCACATTGTCATCGACAGGAATGGGCACTCCCAAACCTCCCTGTGACCAAGGGCTGGCAGTGGATGATTCCAACTTCGAACCTGAGTCTAAAATCATGTTTGTGGTGAATGCAGTGTTCGCCATGGCGCATGCCCTGCACCGGATGCAGCGAGCCCTGTGTGCAAACACCACGCGCCTGTGTGATGCAATGCGCAGCCTTGATGGCAGGAGGCTGTACCGGGACTTTCTGCTTCACATCAACTTCAGAgCTCCATTCTCCCCCCCTGGCTCAGAGAACGTGGTGAAGTTTGACCAGTATGGAGACGGCCTGGGTCGCTACAACATCTTCAACTACCAGCGCCTGCCAGGCAGTGACAAGTTCACCTACATCCAGGTGGGTGAGTGGGCTGAGACTCTCTCCCTCAACGAGTTCTTGATCGGGTGGCCACGGGGAGGGGGGTTGCCCACGTCCCAGTGCAGTGACCCATGCGCTCCCAACGAAATGAAGAAGATGCAGGCTGGCGAGTACTGCTGCTGGATCTGCACAGCTTGTGAACCCTACGAATACCTGCCTGACGAGTTCACCTGTGCACCCTGCGCTCTGGGCCAGTGGCCTCGAGACGATCTGAGTGGCTGCTATGACCTGCCAGAGGACTACATCATGTGGGAGGACGCCTGGGCCATCGGGCCCATCTCCATCGCCTGTGTGGGCTTCGTCTGCACCTCCTTGGTCTTCACTGTCTTCATCCGGCACAACGACACGCCCCTGGTCAAGGCTTCGGGTCGGGAGCTGTGCTACATCCTGCTGTTGGGTGTCCTTATGTCCTACTCCATGACCTTCATCTTCATCGCCAAGCCTTCACCAGCCGTGTGCGCCCTGCGCCGCCTGGGCCTGGGCACTTCCTTCGCTGTCTGCTACTCTGCACTGCTGACCAAGACCAACCGCATCGCCCGCATCTTCAGCGGAGTAAAAGACGGCGGAGCACAGCGACCGCGGTTCATCAGCCCCAGCTCCCAGGTCTTCATCTGCCTGTCATTCATCTCCGtgcagctgctgctggtgtCCGTGTGGCTGCTTCTGGAGGTGCCGGGTACACGGCGCTTCACGCTCCCTGAGAAGCGGCAGACAGTTATCCTCAAGTGCAACGTGCGCGACTCCAGCATGCTGCTGTCGCTCAGCTACGAcgtggtgctggtggtgctcTGCACCGTCTACGCCTTCAAGACCCGCAAGTGCCCTGAGAACTTCAATGAGGCCAAATTCATCGGATTCACCATGTACACCACCTGCATCATCTGGCTGGCCTTCCTGCCCATCTTCTACGTCACGTCCAGTGACTACAGGGTTCAAACCACCACGATGTGTATATCAGTGAGTCTGAGTGGGTTTGTGGTGCTGGGCTGCATGTTTGCCCCTAAAGTCCACATCATCATGTTCCAACCCCAGAAGAACGTGACCAGCCACCGGCTCAACCTCAACCGCTTCAGTGTCAGTGGCCCAGCCACCACCTACGCTTCACATGcATCTGTGAGTGCTCACTACGTTCCGACAGTCTGCAACGGCCGAGAAATCGTCGACTCCACCACCTCATCCCTGTGACCCCTCCTCTAACTACAGCTCTTTAGCGactgttagccaatcagcaCACATTGTGCTCTGCCCCAAGGACTCCGCCCATCCACAGTGTGTAGAAAATgtgtattattatgattattattattattaaattattttctaggGCTTGTACATATTAACTGATGTTGTTGTagagaaacaaaagaacaaaaaaaaaactttctagaGTGATTTTGgagacttttgttttttttgataGCTTTATTGTAAACTGTTGTAAATGACCATGAAATGTGAGCGCCGTTGCAATATCCGATGAGTCTTCTGACTGAGGGTGGGAGGGGAAAAGGGGTGACCGATAAGAGTGGCCATGCCTGCAATACTGGACAAACTGGTCGTTTTCTTTTGTAGGCCTCATTGTAATAATGGattctgtatgtatgtatttctaTGTTGTATATTTTGTACATAATCTTACTGATGGTTTTAACAGCACAAGTTGACAGTGTGTTAGAGAAGAAAAAACGATGACGACGATGCTTCTGTCGATCGGGTGATGACGTCGGGAGTGGACGGAGGGTGAACAGTAGGAGATCTCATGCCTCGACTTCCACAGTGTCTCGTTCTGAACAGGGACACGGTCCTTTTTAAGTAAGCTTTCATGTCGTCTGCTAGTGTGTTACATGAAAAGCTTCTCACAAagcatacagtgctgtgaaaaaaatggTTGCTCTCGTGCaaattttggatatttttttcatatttgtcACATTTCAATTTTGAATACTTTTGGAAATATAGTGTAGAAGGTTCCTCTGCCATTTTTAGTTGCTACATCATATTTCATACAGATTCGAGAAATGCAGCTGATGTTCAAAACTATTCTGAGGATGTAACTGATGTATCTTTCCCAGCTCTTGGTTACCCACAATTctcagtgcactcaaaacacaaAAGGGAGAAAACAGCACCACGAAAACTGGGCAACAATGGCAGAGCCTCCAgagttcatttttaaatgttagtttTTAAAATGCTCATTCCTTTCtgtgattaaattaaaaagcacacAAGTTTTGCACCATAACTGCAAGAGGCCTTTTTGGTGGTGTCACCACAAAGCCTCATTAGACTTAACCATATTTACCATACTAATACAGAGTCGTCTTCATAGGACAGTATTATAGAGTAGAAATTGCATTCTCATTGTAAAAAGTAGCTGCTACCAATTGGGTCCAGTTTCACTAGCCACAGCCAAACACGATTACCACCAGAGCTGTTAAATCTAAACATCACTTGAAAACAGAATCCGGCTTCACAATATGAAGCAGGTTAAAAGGTCTCCAAAGTATCACATGATGCCTCGTTCTAAAGGAatttaaataaagagagagaaaaaacccaGATTAATCCATTATCTACAAACAAAGATACCAtgggaacagtggtgaacctgtCCACGAGTGGCCTACTACAATTTTACTGCATCAACATCTCATCCAGGAAGTCACAAAAGTAGCACAAAATGagcatctaaagaactgcaggctttatttacagtacctCAGTTGAAGTCAATGTATAAGAAAAATACTGAGCATAAATAACAGAATCCATTGAATATTTCCAAGGTGCTCaccactgttaaacatggtagTGGACTTCCCTTGTAATTCCCTTGTAATTGACAGAAGCATGCATTTACAGCCTGTTATTGGGTTTATGCtattacttttttcacattggtaatatacattttgaatcttatattaaaaaaaagttgtatgaACAGAAACATTATTGAAATGTGACAAattccccccccaaaaaaagaaaagaaaacttttttttaacagcactgtacacacacacctctacaaGGTGGCCTCGATTGCTAAAACTTGTACAAATCTGTGATGTGCGAAGTGCTTGGTGAGACgggaatgtgtgtaagtgtgatcCATTGTTTAATGGCTCTTTGTGCCTTATCATATGTGTTGAGTAGTTGGATACGGAAGCTTCCTCTAGACCTCTCGGCGGGAGGTGGCTGAGCCAGTTTTTTTACATCCGTCTTTTTTTACATCtctgtgttttatacatttctacatttaggTGTGCTTTTGGGTTGGGGAAGGAAAGGCAGTGTGGGGTTGTGGGCTGGGGTGGGGTGGGCTGAGGGGAACAAATTTTATTTGACGAGTCGATGACAAATACGTAGTCGTGTCACTGGTTTGTTTGGAGGTGCGTTCGACTGATCTTATTTTTAGCCCCAGCCACTCATCTCTTTTGATCACAGCAGTTTATTCGATTGTCAAGCTCCGTAAGTCAAAATCATTTTAGGTTTTTACGTTTTTTAAAGTGGAATGACGCACACATGAGAACTTGACATGGCAAACAGACATGGAACAGTGACCTAGATAAGCGGCATTCATTATTCACCGTCGTGACAGCAATCGTGTTCAAACTGCATGTCAGCTAACAAGGGGGACGTGGAAGTGAATATGCACAGAGGAATGATAAGAGTAgagtaaatattataattacacTTTTACTGGGTTTGAAAAATGGGGTATCTGCCTGATTAACAACACAGACTTCCAGTCTTCCAGTAAGACAGTGCTCACATAGAAACATacatatactttttaaatgcaTCATCTCACAGAAAAATTTAGGCAACAATCACTGAGCAATTTCATTGGGAAGACTATACTAATACTTGGTATGGGTTTCATTGCATCATTCTGTTGAGTTCTGGACCATACAGGTATTAGAATATCACATTCCATTACGTACCAATGCTGGAAGTATTCATAAGTAGAGGTGGAAGTACTTTATAGTGGCTTTGACGTTATGAATGCACACTGTCAGCAACAATTCAACTCTAATCGGatttggaaatcaagagatAACAGATTAATAGGCATTAAAACATTACTACATCAACTCCTGGACTAGACTGTTGTTTGGATTGTTGGACTAATACACCATACTGTAGGTTTAATTTATGGATTCATGCCATTGAAACCAAATCCAGACCCCCCATAATTTGTGGGTTTGAGCAGAATTTGAGATTAATCTGACAGTTGATGAGACTGTACAGCCTAAAGCCtatgcagcctcagctttctgtacTTGGCTGACAGAGGTAAAGCCCAACATGGCTTTCTGATGTTGTAGCTCATCTGCCTCAAGTCTGGATGTGCTGCTGTACATtctgaggtgcttttctgctcaCTGCAATCGTACAGACTGGTAATCtgagttactgtagccttttTGTCAGCTCCAACCAGTCTGGCTTTGACCAAGTTCAGAGCTTTCTTAATGCTGTAACTGCTGCTCACtggatgtttttctttttatagtcACGTTGTACAAAAATCAAGTTGTGATGAAAATGCTAGAAGATCTAGAAATCTAGATCTAGAAATACATAAACCAACTTTTCTGACATCAACAATCATACCAGACTCAAAATCAGAGAGATCACTTTTTGTCTCCATTCTGATAGATGAAGTGATCATTACCTAAAGCTGCTGACTTCagtattgcatatatatatttgtgcattCCAATGCTGCCACATGATTGGTCGATATTTTAATCAGTGGTACAGGTCTTCCAAATGAATTGTTCGGTGAGTGTTTATGAATGTTTCTTTGGTTGAATTTTGCACTGTAATTCTGcttctttcttttacagtattttttctcTAAAGGCCATTATAGGCCATGTGCAATGCTAAGAAGCAATGctgacacagagacacagacagatataaagtttaaattgttttaaaaaataaaagtagaaagCATGAGTGAGCAGTGGATTATGAAAAGCAAAGCAGCTCCTGCCCCATAGagtcacactgttttttttttttttccagtgctctGCAACCCTCTGCAGTCTGGGCCCTCTTTGTTGTAAGCTTTATACCTCACACTCCCCAAAGTCTGCAACTCACTGATTCTCCCTGCATGTCAAGTTGCTAGGGGACAGCGGTTTTACCACAGCCTCTTTAGGAATGCTTTTGAGCAGAAGGAGAGAAGCAGCATGGGGACTGGAGAATGAAACTTGCTTTATCTGAATGGCTTAGAGGCGTTTTAGAAACAGCGGGCTGTAGGGAGACAGTAATCAGAGCGTATCCACTCATCCCTGGGCGAAGTTCAGCCCCTGTAGTCACCTCCTAACAACAGCGAGGGGGTAAAGATTCTCCGAAAAGCACACTCGTACTGTCGCCACAATCCACAACCAGGCAGCACTTGAAATATATGAATATCCCAAGACTGTTGGTGGCACTGGTTGATAAGGTTGGGTCATATACAGTAGCTCTCAGGGTGATTTATAGGCCGCGTTAAACCGTTATCTGATTTTGGCCTGTAAGTACTTTCGCAAATGTAAAATTGGGCTGCGACTGAAATTGATCCCTATTGCCTGACCAGATAGTAGCAGAATCCCACATGCCGAGCTCATGTTTAATCTGCCCGAATACAGTTTAAATCAAGATCTAATTCTTGCCCAAATGCTCAGCTCACATCCAGGCTAGGTGCTCTTGTGTCATTGTCCATTTGCTCTGTATATTATAGGACAATCAGCTTAAtgcacttgtgccaacaccccggctgctgagtataatatgccAATCTGCCCAAGCCGCATTTGTCAAATCACCAGTTATAGAGTGTAATATGGGAATTGCTCAGCAGCACAGTTCCCAACTTTTCGATTGGCAAGTGTAAAATGTATTAGTCCCAATTCTGCATGGAGTCTCAGCCAATGCTGCCATAAATATTACACATACAACACAAACATGTGATTAGCTGAGCCATGTTTAAAGCTTTTTACACACAACAGCGATTTCTAAAATGAAATAAGTAAATCTTTATGCTGTTCATGAAATTAGCATTGACcgttatttaaaaacacaaacctcCCATTAAAAACTACATGGGAAAATATTTGAAATTCACAAAATCCAGTCACTGTAACCATCATTACCACTTTTTACCATTTGAGATCCAGTTTGTTCCactgtctgttgcttagtaaaGAGAGTTGAGCAATGCATTTTGGTCCACATTAAGCCCATATAGTGATTTAGactgtttattataaattacaGGTGCACTGTGAGAATGTATAGTGCCCTAAAAACCACATTCAAAGTTCACTATATGAGTCTTTAAGACCTTAAAACTTTTAATAGGGATCTATTTCGGTCACAGTCTAAATTTTTGGGTTGCTGATAATCATTCTATTTTCATTTTAGACAAACTATGATTTTGCTTATCAATATTCAACTCCTTGAACCCTGAGAGGCCATATAAGTGGCAATGCTTTGATTCCTTTCTCTTGTGTAATACAGTATGTAGCTAttaattttaatacagtaaccaaataactaaataatatttaatgccaactgaataatacattataatacacacTAATATGAAACTTTGGGTTCAAGGAGTTAACAAACATAGAAGCACAGTGGTCACAAAAACACTCTTGGTTTCAGGTGAATTTAAATACACCACCCAGGTCAGGTCTAAGTAGAAGGTTTTTTGGGTAGATTCAGGTCCAATTTAAACCTCATAAATTAGCGTATTATGAAGTTTTACATGAATGTAAGAAGACACTTTTGATTCATGGTTGATGACAAAAGAGAATCTGCTTTTTTCTGgggtaaaaaaagaataaaatgaaaggGTAGTttgctgtgtgctgtgtgtggattTGATACAGTGATATATTGCAGAGAGAGGTTCTGTTTGCCTCTTGATCTATCTGTCAGCTCCCAACTTGTAAACAGTGAAACGTAACGTTAAGGAACCCTGTGTTGTTTCGGGTGACCCTCAACTTTGAACTCCAGTCAAACACAAAAGCAATAGAACAGTACCCATGGTGCAGTGTGTGCAATAACAAGGACATCATAATAAACAATAACCTACTGCTGTCGTA

Function

symbol description
grm3 Predicted to enable group II metabotropic glutamate receptor activity. Predicted to be involved in G protein-coupled glutamate receptor signaling pathway and regulation of glutamatergic synaptic transmission. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Is expressed in brain and retinal neural layer. Orthologous to human GRM3 (glutamate metabotropic receptor 3).

NR:

description
PREDICTED: metabotropic glutamate receptor 3-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
K04606 GRM3; metabotropic glutamate receptor 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007250942.3 True 9035 mRNA 0.46 6 10465789 10529492

Neighbor

gene id symbol gene type direction distance location
lrrc4 lrrc4.2,LOC103033525,LOC108442864,LOC108263937,LOC107559378,LOC107594935,LOC107738417,LOC107672593,LOC107673147,LOC107723939 coding upstream 1166374 9294573 ~ 9299415 (+)
LOC111194762 NA coding upstream 1349713 9113979 ~ 9116076 (+)
LOC111194832 NA coding upstream 1351735 9110094 ~ 9114054 (+)
rbm28 NA coding upstream 1545811 8904735 ~ 8919978 (+)
LOC103031618 NA coding upstream 1562830 8897577 ~ 8902959 (+)
cmip cmip,LOC107684659,LOC106573687,LOC106560887 coding downstream 65910 10595402 ~ 10628479 (+)
tmem5 tmem5,LOC107722461,LOC107738400,LOC107587049,LOC107559810 coding downstream 228748 10758240 ~ 10764110 (+)
srgap1 srgap1,srgap1a,LOC107670373,LOC108264626,LOC107684655 coding downstream 236523 10766015 ~ 10901559 (+)
LOC103045650 NA coding downstream 373461 10902953 ~ 10912967 (+)
LOC103040136 NA coding downstream 387960 10917452 ~ 10924422 (+)
G157437 NA non-coding upstream 244820 10220666 ~ 10220969 (+)
G157388 sema3a,sema3ab,LOC108264812 non-coding upstream 411814 10048811 ~ 10053975 (+)
G157387 NA non-coding upstream 437883 10027519 ~ 10027906 (+)
G157334 NA non-coding upstream 875217 9585206 ~ 9590572 (+)
G157312 NA non-coding upstream 958656 9504074 ~ 9507133 (+)
G157513 NA non-coding downstream 130301 10659793 ~ 10660427 (+)
G157523 NA non-coding downstream 170665 10700157 ~ 10700372 (+)
G157540 LOC103039511,LOC100702099,LOC100707594,LOC105905159,LOC108412826,LOC105889141,LOC102291458 non-coding downstream 225587 10755079 ~ 10756662 (+)
G157546 NA non-coding downstream 352238 10881730 ~ 10882468 (+)
G157557 NA non-coding downstream 488923 11018415 ~ 11018813 (+)
G157383 NA other upstream 523984 9940829 ~ 9941805 (+)
G157055 NA other upstream 1894912 8569930 ~ 8570877 (+)
G156840 cd9a,LOC108438826,LOC107686554,LOC107733276,LOC107559685 other upstream 2859121 7600567 ~ 7606668 (+)
LOC111194759 NA other upstream 3034221 7372376 ~ 7431568 (+)
ptprq ptprq,LOC108413201,LOC107705767,LOC107686600,LOC107564908 other upstream 3294164 7093507 ~ 7171625 (+)
gan gan,LOC107738389,LOC107684660,LOC107722487,LOC107666225 other downstream 43251 10572743 ~ 10591523 (+)
klhl36 klhl36,LOC107684687,LOC107722460,LOC107666227 other downstream 171296 10700788 ~ 10713982 (+)
LOC103038570 cs012,zgc:112052,LOC103038570,LOC107666220,LOC108424746,LOC107587048,LOC107683025,LOC103371715 other downstream 222207 10751699 ~ 10754698 (+)
hipk2 hipk2,LOC107722467 other downstream 501573 11031065 ~ 11143471 (+)
LOC103031933 ttc38,LOC103031933,LOC108414465,LOC104940279,LOC106573176,LOC100694777,LOC107722483,LOC107673144 other downstream 1810514 12340006 ~ 12366770 (+)

Expression


Co-expression Network