LOC103034482


Basic Information

Item Value
gene id LOC103034482
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 678995 ~ 681903 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007251642.2
taaaatcaaCAGATGTTACAATGAtaatcaaaaataaagtaactaaaggggcttgaacttttgcacagCACTGTGTTCACAGACAGTTCTATACAGACAGTGACTGGACTGATGACCTCAGAGTTCCGCACCACGTTGCCAGGGCGATGATGTCATGGCGATGATGTCACAGAGTGCTCTGCCAGTTCTTAAGGTTAACTTCCAGGTTCTAGGCTCAGTTAGGATTTGGCAGCTTACAGTACGCTTCACTCCTGCGTTCCCCATATCGTTTAGCTGACGCTCTTAACTATTATTGACTGGTAATAACTATTATCTAGAGCTAGCTTATTCACAGGTTCTATATCCACAACTGAGTTTACTTGAGGTCAAGGGTAATAATGCTGAGTAAAGCCCTTCTGAGAGGCTTGGGCTACAAGGTGATACATTCCATCGGTAAAGGCTCTCATGGGGAGGTCGTCCTGGCCAAATCATGGAAATATCCCGAAAACGTGGCCATTAAAATAGTGGACAAGAAAGTGGCACCACCTGATTTCGTTTCAAAATTTCTACCCCAAGAACTGTCTGTTATCAAAACCATAGAGCACCCGAACATCATTAAGGTGCACAAAATTCATGAGATATCAGACAGACTGGTGTTTATTGTGATGGAGTTGGCCGTTAAGACTCTAGAACAAAAGATTGGGCTCTGCCGCCTTCCCAACGACGAGGCCAAAGTCTTGTTCTCCCAACTGGCCAGCGCTGTGAATTATCTGCATGAGCGGGACATCGTCCATCGGGACCTAAAATGTCCAAATGTCCTGCTCACTGCAGAAGACACAGTTAAGTTGAGCGACTTTAGTTTTTCGGGATACTACAAAGGCCTCAGTAAGACGTTCGTTTGCTCCCCTGCCTACGCTGCACCTGAGGTGCTGAACCTCATTCCCTACGATCCCAAAAAGAGCGATGTGTGGAGCCTGGGCGTGACGCTTAACTGCATGGTCACCGGATCCATTCCCTTCAACAATGAAGACATGAGCAGTTTCCTATCATCCCAGCGAGCACCCATACATTTTCCATTTCACATCATATTGGACAAGCAGTGTCGGGATTTAATCACTGACATGCTGAAGTACAATCCCTTAGATCGCCCTTCTATCAGTGAAGTGGCTAACCACCCTTGGCTGCAGTCAAGAAAACAAGATGAATTGAGTGAGACTCCAGATGAATCTTTGTTTGTGGCTGGAAGCTCTTTGAAAATGAAGAAGGCAGAGGATATCCAGCAGCAGCTGCACTCTACTAAGGAGCAGGACAAAGGTGTTCTCTCCCCCATAAAGTCCTTTTTTAAATGGATCGCCGGGAAGATCTTTTAGGGATCAGTAAAGGGATGAAGAAAGTTAAGAAGATGAAAATGATTCAACCGTTGTAGACGTCTAGCCCAGCTACGGTTGATAACAGCGTACTGACTTCTTACTGTGCTAATTTGTCATTTATAAGTAgtttgaccagaggaggatgggtctaCCTTGTGAGtctggttccttccaaggtttcttcctcactgagggagtttttcctggCCACTGTCGCCTTCGGCTTACTCACTTGGGGTCTAAACAAGCCAGTactaatttgt

Function

GO:

id name namespace
GO:0016772 transferase activity, transferring phosphorus-containing groups molecular_function

KEGG:

id description
K08811 TSSK, STK22; testis-specific serine kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007251642.2 True 1612 mRNA 0.45 4 678995 681903

Neighbor

gene id symbol gene type direction distance location
LOC103040340 LOC108410554,LOC107566291 coding upstream 115219 551929 ~ 563776 (+)
LOC103033531 NA coding upstream 141117 421528 ~ 537878 (+)
blvrb blvrb,LOC107692505 coding downstream 22452 704355 ~ 713021 (+)
sertad3 NA coding downstream 32006 713909 ~ 718705 (+)
daw1 daw1,LOC107717604,LOC107727686,LOC107576612 coding downstream 245816 927719 ~ 952480 (+)
LOC103025301 LOC108414026,LOC105012578,LOC107684602,LOC107711073,LOC107566685,LOC107714437,LOC107679025,LOC100332250 coding downstream 733504 1415407 ~ 1457526 (+)
trip12 trip12,LOC107679016,LOC107710892 coding downstream 885212 1567115 ~ 1622172 (+)
G155300 NA non-coding upstream 84999 591674 ~ 593996 (+)
G155283 NA non-coding upstream 88791 587842 ~ 590204 (+)
G155290 NA non-coding upstream 181855 493411 ~ 497140 (+)
G155250 NA non-coding upstream 279381 395765 ~ 399614 (+)
G155233 NA non-coding upstream 318298 344963 ~ 360697 (+)
G155328 NA non-coding downstream 13623 695526 ~ 703112 (+)
G155332 LOC108443044 non-coding downstream 38392 720295 ~ 724186 (+)
G155336 NA non-coding downstream 66931 748834 ~ 749156 (+)
G155357 NA non-coding downstream 132850 814753 ~ 816758 (+)
G155436 NA non-coding downstream 232493 914396 ~ 916240 (+)
G155206 NA other upstream 525732 149347 ~ 153263 (+)
LOC103044527 NA other downstream 421547 1103450 ~ 1106792 (+)
G155491 akt2,LOC107711004,LOC107557843,LOC107692744,LOC107572728,LOC107714435,LOC108264340 other downstream 505243 1187146 ~ 1278262 (+)
LOC103036073 LOC106581333,LOC102227031,LOC105940324 other downstream 521838 1203741 ~ 1223350 (+)
G155776 NA other downstream 2056458 2738361 ~ 2755112 (+)
LOC111194753 NA other downstream 2929115 3611018 ~ 3614491 (+)

Expression


Co-expression Network