fam219b (fam219b)


Basic Information

Item Value
gene id fam219b
gene name fam219b
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 28745696 ~ 28759007 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007251835.3
CCTATCAGGGGTTGTGTTGGTAAAGCTGGTGTTTTCCAGGCAGTGCTGAGGCTGAGGGTGGGCTGTGTAATCATGGAGTTTATCTCCTGCTCTTTATGAAACATGATTTATCTCCTTTATTCGGCTCAAACATGAACGATATAATGGAGGAACAGGAGAAGGACGGGCTGCTGGCGGAGGCTCCGGGAACAGCGAACCCGAGCAGCAGCCGACCTAAACCAGCTCTGGATGGAGGGAATAAGCCAGTGGTGGAGAAAAGAGGACCTTATATTATGTCCAAAGTTCCTGCGATACACACCAAATTACaaaaacacagagagatggCCAGGAGAGCGCTAAAGAAAAAAGGCTTTCCATCAGGAGGGCCTGTCTTACAGCAGCCCAGGCACAGCTCAAAGAATGTGAAATTCAATAAAGGATATGCAGCTCTAAGCCAGAATCCAGAAGACACGCTAATATCCCTGGACTCTGACAGTGATGTAGAGCTGGAGTCCCAGTATTCATCTGGATATTCCTCTGCAGAGGTGCACCCTGAACTGAACCAGCAGCTGCTGAAGGACGGCTACCGTTTGGATGAGATCCCCGACGATGAGGACCTGGACCTCATTCCTCCAAAAGCCATGGGCTCCTCCATCTGCTGCTGCTCAGACAGCCCCTCCTGCTCCATGCAGTGAGAAGGTTCCGCAGAACTGCTTTTAAGTCTtaaccaccaccaacaccaatGTTCAAACCCTCTCCCACCACACTGGACCTGCCATGCTGCCTTCCAGCAGACTGAGCTGTCGCTGAGGCACACGGAGCTCTGCATTTTTGTAGAACAGGCCAGGCCAATATCTGACCAGCTTCTGTGAGGTTCTAGGGCTTCAGCCGCGACTGTTCCCTACTGGTCCCCTTTATGCTGTTGTCAGCAGCTGCCCATGTGGTGGACTGTTACGGTGATCCTACACTTTGTGTAGCACTTACTCGCCTGATTTATGGCTTTGTAAAACTGCACGGTGCTTctgaagctattttaataatggcGGTTTCCTAAAACAGCGCACAGATCAGTCACCACAGAATTTAATGGTATGCCTGACGTCTCTCACTCTGCTATTTGTAATGTGTTTACCACCACTGTGCTATTGGGGAAGCCATAGCCCTTAATATTAGCCTTGACTAggagaccttttttttttttttttttgctcaactAGGATAGCAGACACCATATTAAACTTCAGCTCATAGCTAAACATAGCTAAAGAGTTGATGTTCAGAGCCTGTTTACACCATGCATTCACATTCGTATTTGATGATTGGATCAAGTTCAGTTTTAATTGACAGCCTAAAAAAA
>XR_002651275.1
CCTATCAGGGGTTGTGTTGGTAAAGCTGGTGTTTTCCAGGCAGTGCTGAGGCTGAGGGTGGGCTGTGTAATCATGGAGTTTATCTCCTGCTCTTTATGAAACATGATTTATCTCCTTTATTCGGCTCAAACATGAACGATATAATGGAGGAACAGGAGAAGGACGGGCTGCTGGCGGAGGCTCCGGGAACAGCGAACCCGAGCAGCAGCCGACCTAAACCAGCTCTGGATGGAGGGAATAAGCCAGTGGTGGAGAAAAGAGGACCTTATATTATGTCCAAAGTTCCTGCGATACACACCAAATTACaaaaacacagagagatggCCAGGAGAGCGCTAAAGAAAAAAGGCTTTCCATCAGGAGGGCCTGTCTTACAGCAGCCCAGGCACAGCTCAAAGAATGTGAAATTCAATAAAGGATATGCAGCTCTAAGCCAGAATCCAGAAGACACGCTAATATCCCTGGACTCTGACAGTGATGTAGAGCTGGAGTCCCAGTATTCATCTGGATATTCCTCTGCAGAGGTGCACCCTGAACTGAACCAGCAGCTGCTGAAGGACGGCTACCGTTTGGATGAGATCCCCGACGATGAGGACCTGGACCTCATTCCTCCAAAAGCCATGGGCTCCTCCATCTGCTGCTGCTCAGACAGCCCCTCCTGCTCCATGCAGTGAGAAGGTTCCGCAGAACTGCTTTTAAGTCTtaaccaccaccaacaccaatGTTCAAACCCTCTCCCACCACACTGGACGCTGAGGCACACGGAGCTCTGCATTTTTGTAGAACAGGCCAGGCCAATATCTGACCAGCTTCTGTGAGGTTCTAGGGCTTCAGCCGCGACTGTTCCCTACTGGTCCCCTTTATGCTGTTGTCAGCAGCTGCCCATGTGGTGGACTGTTACGGTGATCCTACACTTTGTGTAGCACTTACTCGCCTGATTTATGGCTTTGTAAAACTGCACGGTGCTTctgaagctattttaataatggcGGTTTCCTAAAACAGCGCACAGATCAGTCACCACAGAATTTAATGGTATGCCTGACGTCTCTCACTCTGCTATTTGTAATGTGTTTACCACCACTGTGCTATTGGGGAAGCCATAGCCCTTAATATTAGCCTTGACTAggagaccttttttttttttttttttgctcaactAGGATAGCAGACACCATATTAAACTTCAGCTCATAGCTAAACATAGCTAAAGAGTTGATGTTCAGAGCCTGTTTACACCATGCATTCACATTCGTATTTGATGATTGGATCAAGTTCAGTTTTAATTGACAGCCTAAAAAAA

Function

symbol description
fam219b Orthologous to human FAM219B (family with sequence similarity 219 member B).

NR:

description
protein FAM219B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007251835.3 True 1336 mRNA 0.48 6 28745696 28759007
XR_002651275.1 False 1303 misc_RNA 0.47 7 28745696 28759007

Neighbor

gene id symbol gene type direction distance location
dhx36 dhx36 coding upstream 359279 28300719 ~ 28386417 (+)
gpr149 gpr149 coding upstream 462378 28255972 ~ 28283318 (+)
LOC111194790 LOC108434085,LOC108264118,LOC108434032 coding upstream 549982 28185750 ~ 28195714 (+)
LOC103044051 LOC108434085,LOC108264118,LOC108434032 coding upstream 560789 28180682 ~ 28184907 (+)
LOC107196882 LOC108434085,LOC108264118,LOC108434032 coding upstream 567710 28173610 ~ 28177986 (+)
arid3b LOC108439030,LOC108264089 coding downstream 9599 28768606 ~ 28859096 (+)
LOC103037946 LOC108439022 coding downstream 195710 28954717 ~ 28969395 (+)
LOC103022881 LOC108439021 coding downstream 259053 29018060 ~ 29063139 (+)
LOC103023184 NA coding downstream 374621 29133628 ~ 29143190 (+)
LOC103038575 LOC108439020 coding downstream 393289 29152296 ~ 29159185 (+)
LOC111194802 NA non-coding upstream 93387 28643321 ~ 28652309 (+)
G161243 NA non-coding upstream 351668 28366168 ~ 28394028 (+)
LOC111194734 NA non-coding upstream 710501 28030613 ~ 28035195 (+)
G161129 NA non-coding upstream 852219 27893087 ~ 27893477 (+)
G161115 NA non-coding upstream 962507 27780854 ~ 27783189 (+)
G161314 NA non-coding downstream 127435 28886442 ~ 28886800 (+)
G161312 NA non-coding downstream 127965 28886972 ~ 28889126 (+)
G161313 NA non-coding downstream 130363 28889370 ~ 28890244 (+)
G161414 NA non-coding downstream 443346 29202353 ~ 29202589 (+)
G161417 NA non-coding downstream 448956 29207963 ~ 29208290 (+)
G161292 rap2b,LOC107757383 other upstream 120911 28622128 ~ 28624785 (+)
c18h3orf33 NA other upstream 949192 27784896 ~ 27796504 (+)
ccnl1 ccnl1,LOC107684610,LOC107557837,LOC107710830 other upstream 1626432 27109671 ~ 27119264 (+)
G160919 ptx3 other upstream 1838069 26905244 ~ 26907627 (+)
LOC103021732 gramd1b,gramd1bb,LOC108264679 other upstream 1990383 26617262 ~ 26755313 (+)
G161331 NA other downstream 311813 29070820 ~ 29116795 (+)
LOC103042463 tmod3,LOC108440576,LOC108264495 other downstream 1594679 30353686 ~ 30414212 (+)
dhdds dhdds,LOC106582847,LOC106605152 other downstream 2095551 30854558 ~ 30894506 (+)
hmgn2 NA other downstream 2116031 30875038 ~ 30878327 (+)
efhb NA other downstream 2825739 31584746 ~ 31605490 (+)

Expression


Co-expression Network