CI01000012_12378120_12378419


Basic Information

Item Value
gene id CI01000012_12378120_12378419
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 12378120 ~ 12378662 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_12378120_12378419.mRNA
AATAACGGGAATGATATGCCATCATCTGCTTTAATATCGCAGACATTCGCAGGGTTTACAAATGTTGCCTATTTGCGTGCACACTACCTTCGTGAGGATGTACGCGCGTTCGATAGTTCATGGCCTTCCATGTCTTTTGTAAAGTGCAAACTAATTATTAGATTAGATTACAGTGCACACAGTACGGGGAATGCCAAGGATAACTCGAGCACTTGGACTAATTATTCACCATTACATTATTCTCCAAAAAGTGTGACTAGGTCGATCTGCTCATATTGCAGTGTAGTGCGATGCTCATAAGGGGGAGCCTTCTTAAAGGTGTAGACCGAGTTTCGGTTGATCTTACATTAAAGAGCCATCAAGTAGTTTTAAACTCATTAGATTACATGATTATAAAATATTACCGCTATCCCTGATCCCTGTTTTTCTAATACGGATAGAATACCCGGAGTCGCATTTCCAAACGCAGTACGAACGAAAGATCAGTTCTCACATTAAAGGGATAGTTTATCTAAAAAAAAAAAAAAAAAAAAATTTTTTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_12378120_12378419.mRNA True 543 mRNA 0.38 1 12378120 12378662

Neighbor

gene id symbol gene type direction distance location
CI01000012_12292583_12371612 ADK, ADKA coding upstream 6508 12292583 ~ 12371612 (+)
CI01000012_12270454_12276521 NA coding upstream 101495 12270346 ~ 12276625 (+)
CI01000012_12220568_12234927 NA coding upstream 142857 12219998 ~ 12235263 (+)
CI01000012_12173747_12212480 VCLA, VCL coding upstream 164835 12173388 ~ 12213285 (+)
CI01000012_12159352_12162539 NA coding upstream 215281 12158648 ~ 12162839 (+)
CI01000012_12381049_12417489 KAT6B coding downstream 1530 12380192 ~ 12418697 (+)
CI01000012_12440074_12465741 SLKA, SLKB, SLK coding downstream 61412 12440074 ~ 12466032 (+)
CI01000012_12489485_12490402 NA coding downstream 110625 12489287 ~ 12490431 (+)
CI01000012_12505469_12509093 ERLIN1, ERLIN2 coding downstream 126807 12505469 ~ 12509316 (+)
CI01000012_12536242_12538668 NA coding downstream 157414 12536076 ~ 12538728 (+)
G76318 NA non-coding upstream 209665 12168168 ~ 12168455 (+)
G76316 NA non-coding upstream 212888 12164961 ~ 12165232 (+)
G76315 NA non-coding upstream 213709 12164183 ~ 12164411 (+)
G76306 NA non-coding upstream 267474 12110427 ~ 12110646 (+)
G76299 NA non-coding upstream 300996 12076910 ~ 12077124 (+)
G76327 NA non-coding downstream 54237 12432899 ~ 12433158 (+)
G76222 NA non-coding downstream 55007 12433669 ~ 12435061 (+)
G76230 NA non-coding downstream 57369 12436031 ~ 12436325 (+)
G76244 NA non-coding downstream 58450 12437112 ~ 12437490 (+)
G76328 NA non-coding downstream 59032 12437694 ~ 12437915 (+)
G75533 NA other upstream 1232381 11144817 ~ 11145739 (+)
CI01000012_10223957_10235955 NA other upstream 2153833 10223697 ~ 10236276 (+)
G73578 NA other upstream 4010493 8366806 ~ 8367627 (+)
CI01000012_07806089_07811902 BEND3 other upstream 4570265 7805248 ~ 7811902 (+)
CI01000012_05923216_05928055 SRD5A2B other upstream 6453815 5922385 ~ 5929186 (+)
G76385 NA other downstream 252093 12630755 ~ 12675666 (+)
G76374 NA other downstream 366869 12745531 ~ 12749169 (+)
CI01000012_13029637_13033226 RGS17 other downstream 636844 13029435 ~ 13038899 (+)
G76645 NA other downstream 1273197 13651859 ~ 13652234 (+)
G76656 NA other downstream 1324825 13703487 ~ 13739731 (+)

Expression


Co-expression Network