pex11a (LOC108431222,LOC107714788,LOC107556261,LOC107690406,LOC107715221,LOC107691149)


Basic Information

Item Value
gene id pex11a
gene name LOC108431222,LOC107714788,LOC107556261,LOC107690406,LOC107715221,LOC107691149
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 21457356 ~ 21461379 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007254477.3
CGTTAATAAACTGAGTGTAGAGCCGGGGTGAGGGTGAACTGGTGTAAAGGTTATCTTACTGGGGGATCTCTCTGTTATCTTTATGGCTGTGGAGACGCAGGTAGCGGCGTGGTAAATCAGGCGAGCTGGAACCCGGTGTGTGTTTGTTCCGGTGTTTCTCGGCGAGCTGCGTGAACTTTCACCAGATTTGGAGCTGCGGTAAAACTCAGCGCTGAGAGAAACACTGGGTTAAACCGAACATGGAGCTGTAGGAGAACTTTACACACCAGCTAACTAAATAACCACCAGTCTGCTGCTCCTGGATCAGTTTATACTGCCAGCGAGACGGGAATGAACACACCCCTTTACTAACTTTTACACAGCTagtttaggttagctagtcTGATTCAACTGAGCAGAGCTTTAACCTCCTCTGTTCAATAACCGAGACCACCAGCTCCTGACCCGACTAAAGCTAGTAACGTTACACTCACTGACTGAACCTCTCGAGACATGGAGTCCTTCATCACCTTCACCAACCAGAGCCAGGGAAGAGACCGGATCTTCAGAGCTACCCAGTATGCCTGTGCGCTGGTAAAGTACCTGCTCCGCAAAGATTCAACTAGAAAAGAGCTGCTGCAGAAACTGCGGAGTCTGGAGTCAAATATGAGCTCCGGACGGAAGCTTTTCAGGCTCGGCAATACCGTGAACTCCATCGATGCAGCCAAGAAAACTCTCTACCTGTCTGACCCTGTGTTGCGTCTTTGCCTCACCGTGGCCAACATTAACCGCGCCCTTTATTTCATCTGTGACAATGTTCTCTGGGCCAGGAGTCTCGGCTTCCTCAAAGGTATCGATAAGGAGCGCTGGAACCTCAATGCCAACCGGTATTACTTCTTTTCTTTAGTGATGAATCTTACTAGGGATGTGTATGTGATCGCCCAGCTGATGGTGCAGAGGTCTCGGGAGAGGCAGTTTCAGCAGAAAGTCAACCAGCACCTCAACGAGAGCCCTGACGTGGCTTGTGTCATTATTCCACAGCTTGATgcgtttctgtttctgttaatTGAAAGTCTCAAAAATCACCCAGCTGTAGCACTCGACACGATCAAGAACGCGTGTGATCTTTTCATTCCGCTTGACAAGCTGGGAATTTATCAGACAAATGCAGGAGTCGTAGGGATGTGTGGACTTGTCTCTTCTCTAATAGGTATACTCTCAGTCCTGAAGAccagtttaaaaatgaaacctTAAGGTGAGGAGAGAAATGAGACTGAATTAAAGATTCAGTGTGAGAGTTCTGTTAATAGAGAAATTAGAATCTAGCTGTCAGAATCATGAATAATGAAAGTTTGATTTATAGTTGGAGGAAAATCGCTTTAAGGTACATCACATATGAACAGATTATATATGTGTTAAATAGGTGTGCTCTCTTGTTTACAGGGAATTATTTCATGCAATATTTCTGTTCAATTTCTTCAAAAGATTAGGATTATTGATTAAGTTTTGAGAGAAGTGTGAATAATGTGAAATGGGCTATTGTAGCAAAACAGCAGTGGTGGATAGAAACCAAGAGTTTACATTATAGTGCAGATAATAATGTTCTTTTACTATGCAAACCACTAGTGAATCTGCACAAggtctttttatatatacaatacaaaataGTGATGATTCTTAGCTGTTCATCTTGACTGGATTTTAATAATACACTTTATActagagctggacaatatggcGAAAATGTATGTCATACATATACTGTAGTTCtgatattgatattattattgAGTCTgggcaatattaataaatattatatatagcaTAATATTTATCAAACGTTTTAACGAAAGCAAAATGCACCACAAgtatcacatttttaaaaactgtcatttaaatTCTTGTTCATGCATATTACAGTGACTTTTGATGACTTTGTCCAGTTCAACAGGATTTTAGATATCCTTGATTTGCTCATTAAAGCATATTTTCAATACACTAAGGAAATTTATTAcgatacaaaaataaatattgtcatattgcccagtGCTTGGATGAAAACTTCTCGTAAAATATGTCATAAACAGTAGCTGCGTTCCAAAGTGTAGGTAGAACGGGTCCTTTCGTCGAACGGGTCCTCAGTAGAACGGGTCCTCAGTAGGATTGTCCTATTAAGACTAACCTGTTGGTCACACGTTTGGAACAGTCTAATGAGACGTCATGGTGGCATTACGCACAAAAGTCATGTGATTACACTAGGGTTCACATGCCTTTTCATTTCTTCactgatatataaataaaatataattaaaatacagtaaaattaacTCAATATTTGCACCAGAATCTTTGGTTTCCCACATTTTTGCCCAGTTTTCTCCAAAAATGAACGAGTGCAG

Function

NR:

description
peroxisomal membrane protein 11A

GO:

id name namespace
GO:0016559 peroxisome fission biological_process
GO:0005779 integral component of peroxisomal membrane cellular_component

KEGG:

id description
K13351 PEX11A; peroxin-11A

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007254477.3 True 2378 mRNA 0.41 3 21457356 21461379

Neighbor

gene id symbol gene type direction distance location
LOC103034933 LOC108431189,LOC101061116 coding upstream 85772 21355119 ~ 21371584 (+)
LOC103034607 si:dkeyp-59c12.1,LOC108431221,LOC105905574,LOC107715203 coding upstream 201396 21251704 ~ 21255960 (+)
rgma rgma,LOC107715216,LOC107690376,LOC107715612,LOC107693037 coding upstream 450066 20986624 ~ 21007290 (+)
lysmd4 NA coding upstream 705560 20745568 ~ 20751796 (+)
arrdc4 NA coding upstream 783129 20666244 ~ 20674227 (+)
LOC103031832 NA coding downstream 170381 21631760 ~ 21699721 (+)
LOC103025486 fli1,LOC107692484,LOC106612965 coding downstream 539281 22000660 ~ 22061810 (+)
LOC103026111 LOC108434138 coding downstream 616099 22077478 ~ 22079758 (+)
LOC103026427 NA coding downstream 619815 22081194 ~ 22084499 (+)
LOC111194835 NA coding downstream 629184 22090563 ~ 22094253 (+)
G159836 NA non-coding upstream 14104 21435849 ~ 21443252 (+)
G159790 NA non-coding upstream 250685 21146273 ~ 21206671 (+)
G159781 slco3a1,LOC107690372,LOC107601651,LOC107715617,LOC107693030 non-coding upstream 331260 21089743 ~ 21126096 (+)
G159778 NA non-coding upstream 376027 21080716 ~ 21081329 (+)
G159777 NA non-coding upstream 379931 21077219 ~ 21077425 (+)
G159864 NA non-coding downstream 30010 21491389 ~ 21491751 (+)
G159868 NA non-coding downstream 47216 21508595 ~ 21508833 (+)
G159891 NA non-coding downstream 291126 21752505 ~ 21752999 (+)
G159896 NA non-coding downstream 386238 21847617 ~ 21850541 (+)
G159904 NA non-coding downstream 457370 21918749 ~ 21918994 (+)
fam174b NA other upstream 382783 21060656 ~ 21074573 (+)
G159748 chd2,LOC107715217,LOC107601632,LOC107549011,LOC107715589,LOC107690375 other upstream 445562 21009302 ~ 21011794 (+)
G159728 NA other upstream 720307 20736598 ~ 20737049 (+)
G159666 NA other upstream 1270437 20185516 ~ 20186919 (+)
necab2 necab2,LOC107694920,LOC107672281,LOC106573751 other upstream 2880919 18525528 ~ 18576437 (+)
G159926 LOC108434146,LOC108434147,LOC108434134 other downstream 686465 22147844 ~ 22152785 (+)
G160134 NA other downstream 1392033 22853412 ~ 22854081 (+)
G160306 NA other downstream 2657750 24119129 ~ 24119825 (+)
LOC103037315 LOC108435313,LOC107551446,LOC107714780 other downstream 4862441 26323820 ~ 26345682 (+)
LOC103021732 gramd1b,gramd1bb,LOC108264679 other downstream 5155883 26617262 ~ 26755313 (+)

Expression


Co-expression Network