LOC103036562 (hipk3)


Basic Information

Item Value
gene id LOC103036562
gene name hipk3
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 3977752 ~ 3999462 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022679498.1
ATTCGCTACATCTCTCAGACGCAGGGTCTGCCAGGAGAGCACTTGTTGAACGTTGGGACGAAGACGTCACGCTTCTTctgcagagagtcggattcccCTTATGCAGCATGGAGATTGAAAtcaaCAGAAGAGCATGAAGCAGAAACCGGGATGAAGTCAAAGGAAGCCAGAAAGTACATCTTCAGCTGTTTGGATGATATAGCGCATGTGAACTTGGTGATGAATCTGGAAGGCAGTGACTTGATGGCAGAGAAGGTGGACCGTGGAGAGTTTGTGGTCTTGCTGAAGAAGATGTTGTTAATAGATGCAGAAAAGAGGATAGTCCCCAGTGACGCCCTCAACCATCCCTTTATCACCATGCAGCACCTGCTGGACTTTCCCCAAAGCAACCATGTCAAATCATGTTTCCACATCATGGACGTGTGCCGGTCACGTCCTGGCACATACGACACCATCAACCGGAACAAAGCTCCGTTTGTGAGGCCTGTCACCACCTCGGCCCCCAACCTGACCGTGCCCTTCAGCAAGATGGCCAGCGTGCACACTCAACCAATGGCCCCATCTGCTCCCTCTCTTATGCATCCTGGGATCCCACTGCAAACCGGAAGTGCTCAGTTCGGGGACGCCTTTCAGCAAGCACTGATTCTCTGTCCCCCGACTATACAAGGTCTCCCTCCCAACCCAAATAAGCCAGCAGGCTATTCTGTCCGGATGGAGAACACAGTACCCCTGGTGACCCAGGCCCCTGCCATCCAGCCTCTACAGATTAGACCAGGGGTCATCACACAGCAGGCCTGGTCTAACCGGGCCCAGCAGATCCTGGTACCAGCCTGGCAGCAGGTGACCGCGGTGGCCCCCCCAGCAACCACACTGGCCTCTGATACTGTGGCAGGCCCACAGAGATTAGCAGACTGGGGGAAAGTTCGCCCTCATGGAAACCATTACACCTCCATTATCCCCCACCCTCAGCCTCTCCTAACCAACCAAATGACCATGTCAGCACATCAGCCCATTAGCATAGGCATCGCTCACGTGGTGTGGCCACAGCCAGCTGCTAACAAGAGAAATAAACTCTGTGGAAACAGGAGTAACTTCTTATACAACACCAACACCCAGAACTCCACCTGCCAGTCCCCAAAGATAGCTAACAATGGGAAAAACGCGGAGGAAGTGGAAGGTCACTGTCAGGAAGcagagtgtgtggtggtggaggcGGAGTTGCAGGCAGTGCAGGAGGAGGAGCCTGCGTGCTGTAAGGCGGAGCCGGAGCCCAACGAGCTGGGCGTGTCCCAGAAGCAGAGGCAGGCCATTGTGATAGCGGATACGCCCAGCCCGACCAGTAGCGTCATCAGCATCAGCAGTGATACagacgaggaggaggagcagcagaGAGTGCAGAGACACTCCATAGAGTGTAAAGGCAGTCCAGAGTGTGAGGCGTGTCAGAGCACACTGAATATGGAGCGTGTGTGTTCACTAAGCAGTCCTGACTCCAGCCTCAGCACCAGCTCCTCAGCTTCACTGCAGTCCAGCGCTTCACCCTGCAAGAGACCCAACAGtatgtCTGATGATGAGCGTGAGAGTGGATGTGACACGGTGGACGGATCGCCTGCCTCTGACTCCTCTGGTCAGGTGGACAGTCCTTTTCTGGAGAGCCGCTACATCGCTGACCAGAACAAGAACTGCAAGCCTCACGTCACCACGGAGACGGAGACGGGCAAACCGCCCATCCGGACCATGGTGGTTCCTCCCATGAGGGTCCAGAACAACAACGAACCCCTGGCCAGGACAGTCCTAGAGTCGTCCTGCCTGTCCAAAAACCGCAGTGGCCACAGCAGACCGCTCCACCACTCCACTTCACTTTTGAACCGGCAACACAAGATCACCCCTGCATCCCACCATCAGCAACCCCTACAGCCACAGCAGCCGCCGCCCACTTTTGGACAGGTTCAGCACTTCGGCTCCTCCCACCAGGAGTGGAACGGCAACTACGGTCATCGTCGGCCTCAGGCCTTCATCCCGCCTACGGTGCATGGCCACACCTTCACCTTACCGCACGGCAGCCCCACCCACACTACGGCCCACCCGCCTCCGCCGCACCTGGGCGTCCACCCGCACGCCCACGGCCAGCCCGCCCTGCTCTCCTACCCCCCTACCGCTCCTCTGGTGACGGCCGCCCCCATGGCCCACCTCCTGGCCTCGCCTGGTGCCACGCGGAGCCACGTCCTGCAGCCGGCCTACAGCCTGTCCCACCCGGCCGGCCACATGGTGCACCAGGTCACGGTGGGCCTCAACCCCCGCCTGCTGCCTTCACCTACCCTCCACCCGCAGGGGCAGTTCAAGCCCCTCTTCCCCCCGCACTCCTTCATTGCCTCACCCGCATATGCAGGCTTCCCCCTCAGCCCCACCAAACTCAGCCAGTACCCCTACATCTGAGACCCCGCCCTCCACCCGCCCCCGCCTGCGCCGCCGGTTCCCTAGCTTTAGCCATCAGGCCTAAAGCCGTGCCCTTTACTGGAACCACAAACCAC

Function

symbol description
hipk3 Enables protein serine/threonine kinase activity. Involved in mRNA transcription; negative regulation of apoptotic process; and protein phosphorylation. Located in cytosol; nuclear body; and plasma membrane.

NR:

description
PREDICTED: homeodomain-interacting protein kinase 3 isoform X1

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022679498.1 True 2531 mRNA 0.59 13 3977752 3999462

Neighbor

gene id symbol gene type direction distance location
LOC103025504 LOC108425960,LOC108266765 coding upstream 78537 3858506 ~ 3899215 (+)
ndufa10 NA coding upstream 1014201 2942774 ~ 2963551 (+)
LOC103044837 NA coding upstream 1039682 2882827 ~ 2938070 (+)
parp9 NA coding upstream 1170998 2792039 ~ 2806754 (+)
lrch3 lrch3,LOC103027580 coding upstream 1256793 2671503 ~ 2720959 (+)
LOC103036857 LOC108433503,LOC108264854 coding downstream 8864 4008326 ~ 4123480 (+)
LOC103029469 spon1,spon1a,LOC107741890 coding downstream 296857 4296319 ~ 4510540 (+)
LOC103037478 LOC108434021 coding downstream 678741 4678203 ~ 4738405 (+)
LOC103030327 maf,LOC108428434,LOC107728098,LOC107381304,LOC108274756 coding downstream 916766 4916228 ~ 4920871 (+)
LOC103036856 LOC103036856 coding downstream 1522224 5521686 ~ 5524043 (+)
G155985 NA non-coding upstream 70557 3906994 ~ 3907195 (+)
G155978 NA non-coding upstream 128880 3848455 ~ 3848872 (+)
G155976 NA non-coding upstream 130135 3846849 ~ 3847617 (+)
G155967 NA non-coding upstream 208425 3768573 ~ 3769327 (+)
G155956 NA non-coding upstream 300895 3676632 ~ 3676857 (+)
G156050 NA non-coding downstream 189044 4188506 ~ 4188789 (+)
G156060 NA non-coding downstream 245789 4245251 ~ 4245521 (+)
G156062 NA non-coding downstream 248360 4247822 ~ 4248039 (+)
G156066 NA non-coding downstream 270043 4269505 ~ 4269708 (+)
G156080 NA non-coding downstream 370268 4369730 ~ 4370105 (+)
LOC103025196 arl4c,LOC103025196,LOC108425959,LOC108267031,LOC107104020 other upstream 45589 3929331 ~ 3932163 (+)
LOC111194753 NA other upstream 363261 3611018 ~ 3614491 (+)
G155776 NA other upstream 1222640 2738361 ~ 2755112 (+)
G155491 akt2,LOC107711004,LOC107557843,LOC107692744,LOC107572728,LOC107714435,LOC108264340 other upstream 2699490 1187146 ~ 1278262 (+)
LOC103036073 LOC106581333,LOC102227031,LOC105940324 other upstream 2754402 1203741 ~ 1223350 (+)
LOC103030011 LOC108433937,LOC108264032,LOC106573278,LOC106561481 other downstream 576206 4575668 ~ 4637290 (+)
G156188 NA other downstream 1157692 5157154 ~ 5157400 (+)
ptprq ptprq,LOC108413201,LOC107705767,LOC107686600,LOC107564908 other downstream 3094045 7093507 ~ 7171625 (+)
LOC111194759 NA other downstream 3372914 7372376 ~ 7431568 (+)
G156840 cd9a,LOC108438826,LOC107686554,LOC107733276,LOC107559685 other downstream 3601105 7600567 ~ 7606668 (+)

Expression


Co-expression Network