terb1


Basic Information

Item Value
gene id terb1
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 7755742 ~ 7770303 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022679545.1
GCCTCACGTAAACTTAATAAGAAACTACACGCTAAATAAGCAACGTTTTGGTAGCGAAATTGATTTGTGGCGCTAGAAATGAATTCAGTTTCAGGTACCCAGCGTGAAAATATCAGCAGTGCTTGTCCAAATATACTTAACGaaatCAAGACTGATCTCCGATTGTTACTCAATTGTATGAAGTACCAGATGAAATGTCCAGACTCACAGAAACAGGCTCTACTTACCATTGTTTCAATCTGTCAACAGAACAGGCAGAATGTGGAGTTCTTCAAAGAAATTGGAGGAGTGAAGTACATCTACAACCTCTCCAGGTCCAGCCATTACTCTGCAGTTAAAGAGACAGCTCTTTTCACACTTGGTTCCTTGGCGGAGGTTAATGAGAGCTGTAAGCAGGCCCTCTGTACAATGGAGACGTTCACTGGACTGGCAGAATGCATGAAAGCTGAAGAGTCCTCCACACAAAAGAGAGTGACAGTCTATTTGCTTTGTGTATTGGTTTCCAACAACAgacTGGGGCAGAGCCTTGCAAAGGCTTCAGGGTGCATTGATATTCTGCTTCAGTTATTGAGGGATTGTTTTCCAGTGTCTGGTGGGCCTAATGAGCTGCTCCCATTGTGGACTTCAGTGTCCAGTGCTCTTTGTGGCTGTGTCAACAACCCCCAAAAtgAGGAAAACCAgcatgtttgcatgtgtgtgttcccCCTGGTAAATGCATGGCTGCTGCAGGTGTCTGTATCCAAGGCAGAGCTGGCACAACCCATCTGTTCATTTATAAGCATGACTGTTGCCAATAACACACATGCTCAAGAGTACTTTGCATCAGTTGGAGGGCTGGTTACGCTCACCAACACATTGGCCAGTGTGGTGGCCCAGTGCAGAAACAATGCTACGGCCTGCAAGCTTGCTGCTATGATCACCCGAACACTTTCTGCCTGCATTGCAGACAATGAAGCTTTAGCACCTGTCCTGTCTGAGCTGTGGGTGGTTCCAgacctcctcctgctgctgtctAGCCCAAACCTCAATCAGCGGGACCAGCTGACTGTGGTCTTGACCCTTGGACAATGTACTGATGCTTGTGTGGAACATCAGTCACAGCTGCTGCTGGGTGGAGGGCTTCCCCTGATGATCTCACTGCTGACTGATACAAATGATGAGGAAGTCAGAAAGGCAGCTATTTTTGTGCTACATACCTGCAAAAAGATCACGGAGTCATTGGGTGGAGACACACTGGATCAGAACAAGGAGTGCGACTTGCAGAAACACTGGCAGTCAGCCCTGGAAATACTACAGAGAATCCAGCGTCTAGAAAAGGGACAGCTGGCTTGTACGGAGGACGAGCGTTGGGGGAAGTATATGGAAAATTCTCCAGATCGGCACACACAGTCAGTTCTGTTGAGGCCAGCTTGTCCTGCGGAATGTGAGGAGGAATTGTGGGAGGGCTCAGTGGTGCGAAAGGTGAAAGGTCGAAGCAGTGTATATAAGGAGGAGTCAGATGGAGAGAACATTCTGCACATAAATACGACCTCTACACAACCTCAGGATCGGCCAGTCACAACCCAGAGAATGCAAAACCTTGAGCCTATGCGGCACGTTCGAAGACAGATCTTCAGAGACTTTGATAAGTCACTGAGCTCTTCCCAAATGAGAGATGAACCACAAGATCTGAGAGGACCAGTGAgggcagagaaaaaaaagagtgagcTACAAATTAGAAGACAGCAAGAgatgaaaaagagagatgaaAGAGAGGAGACTGTGAAGATGAAAGCTCACTGCAGCAAAAGCAGAaggacagacacaggcacaGTTGATTGGCCTAATGGAAACTCTGAAAAAGTCACATGCACCAAGTCTCCAGCAGAAGGCGACAGAGGCATGAAAAGCCCAGATATTTTCAGACATCCTGCTCCCATGAAGCGACGCCAGCAGAGACAGGCTCCCTCTGAGGATGAactgtctctgtgctctgaGCTACTGGAGAGTGAAATTGAGAGGATCCTCATCACTCCAGCTGTTCCCAAACCCAGCAAGCTACGCTGTGCTGCTTGTGTGAGAGGAAAGGATGAGGTGGACAGTCGTTCATTGGGGGCTGTGGTGCGCAGCTGCAGATGCCTCTGCGAGTTTCACCTGGTTCTGCAGCAGGCTGAGGATGACTATAAGAAAAGTCTGCGTCGTGGGCGTGCCGTGCACACAGtcaTAAATCTCACCCCACTGAAGAGGCCATGTGAAACAGAGGAGTCAAACATGGAGAAAAGAAATGTTTCCAGTCTTAGTAAAACACTTGAGGATGGCAAAGAGACTTGTTCAGACATTCACAAAAAAAGGAGGAACTACTCTGTAGATGAGCTGGGCTTCCTCGATGAGGGCGTGAAGCGATTTGGTAACTCCTGGAACTCCATACTCTGGGCTTACCCCTTCCAGCAAGGACGGACTAATGTAGACCTGGCCAAGAAATACAGAAAGATTAAGCAGGGCTTAGCTCAGGCACCGGACCTTCTAACACTGGATTCTGCTGAACAAAGAGTTCATTAGACAGGCGACATGGTCTTTGCAGTTCCAGCACTTGAgttgaattttacattttactgtttataacaGTTTACTGATTGTTTGCAAAGTTTCAGTtgtgattatttaaaaacatattttacgtTTAATTGTTAGTAATACTAAATGTCTTCATattgaaaaaggaaaagaaatgaGATGGGTTTTTTTTGGACATGGAAGAGTGTTCGTAATTCGAGAGAATAACTTATTGAACtttatttgaaataaagttTCCCTAATGGGTTTCTT

Function

NR:

description
telomere repeats-binding bouquet formation protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022679545.1 True 2805 mRNA 0.46 21 7755742 7770303

Neighbor

gene id symbol gene type direction distance location
LOC103030643 LOC103030643 coding upstream 28792 7720499 ~ 7726950 (+)
LOC103030109 LOC108423680 coding upstream 37028 7712763 ~ 7718714 (+)
LOC103029792 cers3b,LOC103029792,LOC108264168,LOC108426826 coding upstream 53494 7690215 ~ 7702248 (+)
LOC103029157 LOC108439094 coding upstream 66568 7656501 ~ 7689174 (+)
vwf vwf coding upstream 100693 7613959 ~ 7655049 (+)
LOC103034665 LOC108439498 coding downstream 13333 7783636 ~ 7798009 (+)
LOC107197496 arf5,zgc:77650,LOC105912562,LOC108439765,LOC108439842,LOC107599983,LOC103033491,LOC107599973 coding downstream 53707 7824010 ~ 7828562 (+)
LOC103033491 arf5,zgc:77650,LOC103033491,LOC108439765,LOC108439842,LOC107599983,LOC107599973,LOC105912562 coding downstream 59799 7830102 ~ 7835726 (+)
LOC103032733 LOC108439982 coding downstream 81622 7851925 ~ 7860510 (+)
odf3b NA coding downstream 91769 7862072 ~ 7866578 (+)
G156856 pdp2,LOC108423909 non-coding upstream 78 7752203 ~ 7755664 (+)
G156824 utp15,LOC107559694,LOC107686557,LOC107662854 non-coding upstream 196785 7553653 ~ 7558957 (+)
G156731 LOC108437702,LOC108264175 non-coding upstream 343054 7351997 ~ 7412688 (+)
G156697 ddx11,LOC107686596 non-coding upstream 507282 7245764 ~ 7248460 (+)
G156623 gcsh,LOC105912338,LOC107662900,LOC100702337,LOC107564915,LOC102203905,LOC102786853 non-coding upstream 725034 7026598 ~ 7030708 (+)
G156916 NA non-coding downstream 66452 7836755 ~ 7938030 (+)
LOC107197497 NA non-coding downstream 68423 7838726 ~ 7839633 (+)
LOC107197499 NA non-coding downstream 71354 7841657 ~ 7844823 (+)
LOC107197493 NA non-coding downstream 76180 7846483 ~ 7849878 (+)
G156917 NA non-coding downstream 76312 7846615 ~ 7860640 (+)
G156840 cd9a,LOC108438826,LOC107686554,LOC107733276,LOC107559685 other upstream 149074 7600567 ~ 7606668 (+)
LOC111194759 NA other upstream 324174 7372376 ~ 7431568 (+)
ptprq ptprq,LOC108413201,LOC107705767,LOC107686600,LOC107564908 other upstream 584117 7093507 ~ 7171625 (+)
G156188 NA other upstream 2598342 5157154 ~ 5157400 (+)
LOC103030011 LOC108433937,LOC108264032,LOC106573278,LOC106561481 other upstream 3118452 4575668 ~ 4637290 (+)
G157055 NA other downstream 799627 8569930 ~ 8570877 (+)
G157383 NA other downstream 2170526 9940829 ~ 9941805 (+)
gan gan,LOC107738389,LOC107684660,LOC107722487,LOC107666225 other downstream 2802440 10572743 ~ 10591523 (+)
klhl36 klhl36,LOC107684687,LOC107722460,LOC107666227 other downstream 2930485 10700788 ~ 10713982 (+)
LOC103038570 cs012,zgc:112052,LOC103038570,LOC107666220,LOC108424746,LOC107587048,LOC107683025,LOC103371715 other downstream 2981396 10751699 ~ 10754698 (+)

Expression


Co-expression Network