Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC103027133 |
| gene name | fzd9,fzd9b,LOC107563503,LOC107713270,LOC107691950 |
| gene type | coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035914.1 |
| NCBI id | CM008317.1 |
| chromosome length | 41377133 |
| location | 22813535 ~ 22816398 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| symbol | description |
|---|---|
| fzd9b | Predicted to enable Wnt-activated receptor activity and Wnt-protein binding activity. Predicted to be involved in canonical Wnt signaling pathway and non-canonical Wnt signaling pathway. Predicted to act upstream of or within cell surface receptor signaling pathway. Predicted to be located in membrane. Predicted to be active in plasma membrane. Predicted to be integral component of membrane. Is expressed in several structures, including central nervous system; lateral plate mesoderm; neural plate; sinoatrial ring; and tail bud. Orthologous to human FZD9 (frizzled class receptor 9). |
| fzd9 | Enables Wnt-protein binding activity; protein heterodimerization activity; and protein homodimerization activity. Involved in negative regulation of neuron apoptotic process; positive regulation of neural precursor cell proliferation; and regulation of cell cycle. Located in cell surface; cytoplasm; and plasma membrane. |
| description |
|---|
| PREDICTED: frizzled-9 |
| id | name | namespace |
|---|---|---|
| GO:0060070 | canonical Wnt signaling pathway | biological_process |
| GO:0007186 | G protein-coupled receptor signaling pathway | biological_process |
| GO:0008406 | gonad development | biological_process |
| GO:0030183 | B cell differentiation | biological_process |
| GO:0007405 | neuroblast proliferation | biological_process |
| GO:0007420 | brain development | biological_process |
| GO:0001944 | vasculature development | biological_process |
| GO:0009790 | embryo development | biological_process |
| GO:0048471 | perinuclear region of cytoplasm | cellular_component |
| GO:0031527 | filopodium membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0030165 | PDZ domain binding | molecular_function |
| GO:0042813 | Wnt-activated receptor activity | molecular_function |
| GO:0017147 | Wnt-protein binding | molecular_function |
| GO:0004930 | G protein-coupled receptor activity | molecular_function |
| id | description |
|---|---|
| K02842 | FZD9_10, CD349_50; frizzled 9/10 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_022679750.1 | True | 2825 | mRNA | 0.51 | 2 | 22813535 | 22816398 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC103026853 | LOC108429884 | coding | upstream | 76906 | 22728533 ~ 22736629 (+) |
| rnf7 | rnf7,LOC107557824,LOC107713281,LOC107692028 | coding | upstream | 86089 | 22722720 ~ 22727446 (+) |
| LOC103028656 | LOC108264789,LOC108429874 | coding | upstream | 420960 | 22302354 ~ 22392575 (+) |
| snrpa | snrpa | coding | upstream | 525894 | 22282694 ~ 22287641 (+) |
| itpkc | itpkc,itpkcb,LOC107596863,LOC107758549 | coding | upstream | 553464 | 22234292 ~ 22260071 (+) |
| LOC103027426 | LOC103027426 | coding | downstream | 76074 | 22892472 ~ 22893301 (+) |
| LOC103030816 | NA | coding | downstream | 244177 | 23060575 ~ 23094876 (+) |
| LOC103026225 | cntn5,LOC107691883 | coding | downstream | 561471 | 23377869 ~ 23673136 (+) |
| LOC103025495 | LOC108429891 | coding | downstream | 931344 | 23747742 ~ 23913263 (+) |
| LOC103024981 | NA | coding | downstream | 1127295 | 23943693 ~ 23949888 (+) |
| G160129 | NA | non-coding | upstream | 67237 | 22745357 ~ 22746298 (+) |
| G160115 | NA | non-coding | upstream | 91775 | 22721208 ~ 22721760 (+) |
| G160106 | NA | non-coding | upstream | 140631 | 22670116 ~ 22672904 (+) |
| G160098 | NA | non-coding | upstream | 163469 | 22649831 ~ 22650066 (+) |
| G160096 | NA | non-coding | upstream | 164616 | 22648636 ~ 22648919 (+) |
| G160144 | NA | non-coding | downstream | 30993 | 22847391 ~ 22847763 (+) |
| G160137 | baz1b | non-coding | downstream | 40694 | 22857092 ~ 22860616 (+) |
| G160142 | selenot,selt1b,LOC108429894,LOC108264179,LOC107557827,LOC107710848,LOC107684611 | non-coding | downstream | 78657 | 22895055 ~ 22899397 (+) |
| G160160 | NA | non-coding | downstream | 95161 | 22911559 ~ 22948189 (+) |
| G160168 | NA | non-coding | downstream | 148935 | 22965333 ~ 22966591 (+) |
| G159926 | LOC108434146,LOC108434147,LOC108434134 | other | upstream | 660750 | 22147844 ~ 22152785 (+) |
| fam174b | NA | other | upstream | 1738962 | 21060656 ~ 21074573 (+) |
| G159748 | chd2,LOC107715217,LOC107601632,LOC107549011,LOC107715589,LOC107690375 | other | upstream | 1801741 | 21009302 ~ 21011794 (+) |
| G159728 | NA | other | upstream | 2076486 | 20736598 ~ 20737049 (+) |
| G159666 | NA | other | upstream | 2626616 | 20185516 ~ 20186919 (+) |
| G160134 | NA | other | downstream | 37014 | 22853412 ~ 22854081 (+) |
| G160306 | NA | other | downstream | 1302731 | 24119129 ~ 24119825 (+) |
| LOC103037315 | LOC108435313,LOC107551446,LOC107714780 | other | downstream | 3507422 | 26323820 ~ 26345682 (+) |
| LOC103021732 | gramd1b,gramd1bb,LOC108264679 | other | downstream | 3800864 | 26617262 ~ 26755313 (+) |
| G160919 | ptx3 | other | downstream | 4088846 | 26905244 ~ 26907627 (+) |
