LOC103035823 (bcl2l10)


Basic Information

Item Value
gene id LOC103035823
gene name bcl2l10
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 30090299 ~ 30102977 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022679857.1
ATTGGAGAGAGTGGGCGGAGCCTCTGCAGCTGCAAAGGGCCGCCGCTGCTGCTACTCTATTATCCACGGACTGACCACCAGCCTGAGCGGAGCAGCCGGACACCGGGGGGAAGAAAATGTCCTGTTGGTTAAGGAAAGAGACTCTGGCGCTGGCGGAGGACTACATCCGCTTCTGCACCGGGGACCAACGGACGCCCCCCAGCGAGTCGGCCGAGGCCATGCGCCGCCTGGCCAAAGAGATGGAGCGGCAACACCATTCTAAATTCCACTCGCTGTCCCAGAGCTTCCTGACGGCCTGCGGCGCAGACCCCAGCGCGTGCCTCCGGAGCGTCATGGCCGTGCTGGTGGAGGACGGGAAGCTGAACTGGGGCAGAGTTGTGTCGCTGTTTACATTCACAGGCGTTCTGGCCACTGAACTATTCTCTAGAGGAGACGGGCCGGAGTGCTGCAGCAGGTTAGCAGAGACTATAGCTGACTACCTGGGAGCAGAGAACAAAGAAtggctgctggaaaatgaaggCTGGgAGGGATTCTGTAAGTTCGTCCGCAGAGCGGGACATCTAGGTCAAGATTCCTCCATGAAAACAGCACTGTTTGCTGCGGCAGGAGTCGGGATAGCTGGACTGACCTTTCTCCTCGTGCGCTGACCTccttatttattcatataaatatatatttttgtcttccttcctcttgcctttatttctttcttttagccatttaatttcattttcctCTTTTGTCCTGTTTCCTTGTTTTCTATCCTGTTTATGGAGATGGACTAAAATATCTTtgaggaattttttttttttctccagtttttggTTACTTAGTAAACCAAGGACTCAGTTGAATGTTATGCACATTGGTGCCACTAGTCAATCATATtcactctttctatttctctctctctctctctcttctctctctctctctctctctctctctctctctctatctgtctgtgcatatcttttgtgctttttttattttaaaaatgcttctAGGTAGTCATATTTGTCATTATTTCCTTTTAATGTAGATAGTAACAGTAAAAATTGTGGCTTTCTGAGAGAAGACACAAACACAGGTTTAAAACATGATTACTTTTCTTTGATTAGAGCTGATACTCtttgtttcttattattttgagtGGGAAGGGAGGTGCTGCGAAGAGTCTAATTCATTCATCAATAATAAAGATCTGTGgtgaaattaatatattatatttatatgaataaaaagtaaacagCAGCCAGAAGCAtttgatttactgtattttagtgtGTATTCGTTTACATtgatatctgatttttttttttttttttttttttttttgcttttgttgtgAAGGTGCTAATCTGTGTTTCCAGTCTTTATGTAATTTTCCAATTAGTGACCAACTTAAtttgtaaaattgtatttattttccttttaaagaACAAATTGTAACTATTATTAGCAATTATCCTACATTTCACAAAGCATATTTTtgaatctttttatttatttaactcttttaataaaatgttttcataaaAGA

Function

symbol description
bcl2l10 Predicted to enable protein heterodimerization activity and protein homodimerization activity. Acts upstream of or within several processes, including epiboly; regulation of release of sequestered calcium ion into cytosol; and somitogenesis. Located in mitochondrion. Is expressed in several structures, including digestive system; margin; mesoderm; nervous system; and yolk syncytial layer. Human ortholog(s) of this gene implicated in multiple myeloma; myelodysplastic syndrome; and stomach carcinoma. Orthologous to human BCL2L10 (BCL2 like 10).

NR:

description
PREDICTED: bcl-2-like protein 10

GO:

id name namespace
GO:2001243 negative regulation of intrinsic apoptotic signaling pathway biological_process
GO:0001756 somitogenesis biological_process
GO:0043066 negative regulation of apoptotic process biological_process
GO:0051279 regulation of release of sequestered calcium ion into cytosol biological_process
GO:0097192 extrinsic apoptotic signaling pathway in absence of ligand biological_process
GO:0007369 gastrulation biological_process
GO:0008630 intrinsic apoptotic signaling pathway in response to DNA damage biological_process
GO:0005741 mitochondrial outer membrane cellular_component
GO:0042803 protein homodimerization activity molecular_function
GO:0046982 protein heterodimerization activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022679857.1 True 1543 mRNA 0.42 3 30090299 30102977

Neighbor

gene id symbol gene type direction distance location
LOC103042250 gnb5,gnb5b,LOC107700591,LOC107588534,LOC107704270,LOC106562494,LOC106518983,LOC102225297 coding upstream 1589 30036411 ~ 30088710 (+)
myo5a myo5a coding upstream 62551 29901316 ~ 30027748 (+)
LOC103032796 arpp19a,LOC108413875,LOC107704273,LOC108264505,LOC107676482,LOC107712699,LOC103358163 coding upstream 191870 29889893 ~ 29898429 (+)
LOC107196975 NA coding upstream 205693 29875774 ~ 29884606 (+)
LOC111194842 NA coding upstream 347272 29741061 ~ 29743027 (+)
lysmd2 lysmd2 coding downstream 328470 30431447 ~ 30441876 (+)
LOC111194807 NA coding downstream 558905 30661882 ~ 30672269 (+)
LOC111194808 LOC102215143 coding downstream 695161 30798138 ~ 30800224 (+)
LOC103039032 NA coding downstream 868195 30971172 ~ 30983860 (+)
slc9a1 slc9a1,LOC108256597,LOC107688187,LOC107671463,LOC107552533,LOC107564092 coding downstream 1061061 31164038 ~ 31255308 (+)
LOC111194809 NA non-coding upstream 56898 30030923 ~ 30033401 (+)
G161599 NA non-coding upstream 57078 29965301 ~ 30033221 (+)
LOC111194812 NA non-coding upstream 215987 29870910 ~ 29874312 (+)
G161532 NA non-coding upstream 273699 29813621 ~ 29816600 (+)
G161511 NA non-coding upstream 366178 29723894 ~ 29724121 (+)
G161620 NA non-coding downstream 37738 30140715 ~ 30140944 (+)
G161622 mapk6,LOC107550634,LOC107704268,LOC107747613,LOC107588533,LOC107700590 non-coding downstream 59127 30162104 ~ 30213901 (+)
G161677 NA non-coding downstream 113525 30216502 ~ 30216804 (+)
G161682 NA non-coding downstream 148605 30251582 ~ 30252005 (+)
G161683 NA non-coding downstream 149125 30252102 ~ 30252497 (+)
G161331 NA other upstream 973504 29070820 ~ 29116795 (+)
fam219b fam219b other upstream 1331292 28745696 ~ 28759007 (+)
G161292 rap2b,LOC107757383 other upstream 1465514 28622128 ~ 28624785 (+)
c18h3orf33 NA other upstream 2293795 27784896 ~ 27796504 (+)
ccnl1 ccnl1,LOC107684610,LOC107557837,LOC107710830 other upstream 2971035 27109671 ~ 27119264 (+)
LOC103042463 tmod3,LOC108440576,LOC108264495 other downstream 250709 30353686 ~ 30414212 (+)
dhdds dhdds,LOC106582847,LOC106605152 other downstream 751581 30854558 ~ 30894506 (+)
hmgn2 NA other downstream 772061 30875038 ~ 30878327 (+)
efhb NA other downstream 1481769 31584746 ~ 31605490 (+)
G162017 NA other downstream 1965885 32068862 ~ 32148190 (+)

Expression


Co-expression Network