Item | Value |
---|---|
gene id | pik3c2a |
gene name | pik3c2a |
gene type | coding |
species | mexican tetra (Astyanax mexicanus) |
category of species | ornamental fish |
Item | Value |
---|---|
chromosome id | NC_035914.1 |
NCBI id | CM008317.1 |
chromosome length | 41377133 |
location | 39271936 ~ 39337878 (+) |
genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
symbol | description |
---|---|
pik3c2a | Predicted to enable 1-phosphatidylinositol-3-kinase activity and 1-phosphatidylinositol-4-phosphate 3-kinase activity. Acts upstream of or within angiogenesis. Predicted to be part of phosphatidylinositol 3-kinase complex. Predicted to be active in cytoplasm and plasma membrane. Is expressed in several structures, including axis; heart tube; nervous system; notochord; and pectoral fin musculature. Orthologous to human PIK3C2A (phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha). |
description |
---|
PREDICTED: phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha isoform X1 |
id | name | namespace |
---|---|---|
GO:0046854 | phosphatidylinositol phosphorylation | biological_process |
GO:0036092 | phosphatidylinositol-3-phosphate biosynthetic process | biological_process |
GO:0048015 | phosphatidylinositol-mediated signaling | biological_process |
GO:0005886 | plasma membrane | cellular_component |
GO:0005942 | phosphatidylinositol 3-kinase complex | cellular_component |
GO:0035005 | 1-phosphatidylinositol-4-phosphate 3-kinase activity | molecular_function |
GO:0005524 | ATP binding | molecular_function |
GO:0035091 | phosphatidylinositol binding | molecular_function |
GO:0016303 | 1-phosphatidylinositol-3-kinase activity | molecular_function |
id | description |
---|---|
K00923 | PIK3C2; phosphatidylinositol-4-phosphate 3-kinase |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_022679940.1 | True | 6937 | mRNA | 0.50 | 33 | 39271936 | 39337878 |
XM_022679941.1 | False | 6933 | mRNA | 0.50 | 33 | 39277479 | 39337878 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
tspan3 | tspan3,tspan3a,LOC107690355 | coding | upstream | 80531 | 39185222 ~ 39191405 (+) |
LOC103046335 | ch25hl1.2,LOC108435345,LOC107691130,LOC107725743,LOC107567893,LOC102790067 | coding | upstream | 96798 | 39173324 ~ 39175138 (+) |
LOC111194738 | LOC104947953,LOC106536897 | coding | upstream | 177129 | 39092479 ~ 39094807 (+) |
LOC111194822 | LOC107569781 | coding | upstream | 320812 | 38946176 ~ 38951124 (+) |
LOC111194723 | LOC107704663 | coding | upstream | 326032 | 38944402 ~ 38945904 (+) |
LOC103038446 | LOC108443054,LOC108263931,LOC108265089 | coding | downstream | 149888 | 39487766 ~ 39492076 (+) |
LOC111194742 | NA | coding | downstream | 477118 | 39814996 ~ 39820624 (+) |
LOC103034226 | NA | coding | downstream | 500159 | 39838037 ~ 39927918 (+) |
LOC103039568 | sox9 | coding | downstream | 926785 | 40264663 ~ 40270386 (+) |
LOC103036843 | sstr5,LOC108241368,LOC103468864,LOC107083133,LOC106942343,LOC103140984,LOC102219310,LOC106518680 | coding | downstream | 1421397 | 40759275 ~ 40765548 (+) |
G163495 | LOC107567882 | non-coding | upstream | 8156 | 39257438 ~ 39263780 (+) |
G163491 | NA | non-coding | upstream | 22260 | 39249217 ~ 39249676 (+) |
G163474 | NA | non-coding | upstream | 50284 | 39202333 ~ 39221652 (+) |
G163465 | NA | non-coding | upstream | 93059 | 39176200 ~ 39178877 (+) |
G163444 | NA | non-coding | upstream | 142350 | 39107787 ~ 39129586 (+) |
G163504 | NA | non-coding | downstream | 27716 | 39365594 ~ 39371719 (+) |
G163587 | NA | non-coding | downstream | 90024 | 39427902 ~ 39428604 (+) |
G163606 | NA | non-coding | downstream | 216440 | 39554318 ~ 39561345 (+) |
G163604 | NA | non-coding | downstream | 271604 | 39609482 ~ 39610032 (+) |
G163689 | NA | non-coding | downstream | 451956 | 39789834 ~ 39790057 (+) |
G163105 | kpyk,LOC103044212,LOC108432067,LOC108264538,LOC106587214 | other | upstream | 1859967 | 37409992 ~ 37411969 (+) |
LOC103046025 | hcn4,LOC108263998 | other | upstream | 1919157 | 37287167 ~ 37352779 (+) |
G162964 | LOC108431875,LOC108413582 | other | upstream | 2517249 | 36754185 ~ 36754687 (+) |
ccpg1 | ccpg1 | other | upstream | 3102191 | 36132415 ~ 36169745 (+) |
pygo1 | pygo1 | other | upstream | 3151534 | 36112042 ~ 36120402 (+) |
reln | reln | other | downstream | 237211 | 39575089 ~ 39788454 (+) |