LOC103031832


Basic Information

Item Value
gene id LOC103031832
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 21631760 ~ 21699721 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022679979.1
ATGAGGCagaggaagaagaagcagaTGGACAGAGGGCAAACCCTCAGCGCTCTTCAGAGAGGGAGTAAAGGACTCTGCGAGAAAAGGGAGGAAAGGGAGAAGATAGGCAAAGAGGAAAGAAAGGCAACAGAAAACCCCACTGTGATCGAGATGAGTGCCGAGAAGGCTGCCTCAGATGACCGAGCTTTAAATCTCATTTCAAATAGGACCTGGCGAAGCAGAGCCACTGTGTCCCGAATACCAATGAAGGCCATGCCAAGCACGAGTGAAGGCTCAGCATGcacaacacctgacACCCCGACTGCTCAGAACAACCTGGGCCTTCCCTCTGTGATGCGTCTGATCCTCACAGCCATCGACAGTCTGAGAAATAAAGCTGATATGGGGCGCTTGTCGGTAAGCCCAGCCGGACGACTTTACCCAATCCTCCCTTTGAAGAAAAGTAAATCCGAGTCTGCCCAGCCGGCCAGCATATCCGTGGTCTTCAGATtggtTCAGGCCTGGTTCGGGTCAGCACCTCTGCCTCTGGACTGCAGCAGTGACTCCGCCTCTCTGTCCCGCTGCTCCTCTATCTCTCAGGAGAAGCTGATGGACCGGGTCATCCAGCACGCCGAGCTCATCTCCCGCATCTCTGATGAGTGCTGCACACTGTTCGAGGAGATGTTTGTCCCGTACTCAGCGAGAGCTTTTAGAATCCCAGGAGGAAACTCCTGCATCACAAAGGCCTTCCCCATCCCCATCCCCAGCTCCAAGACTGAGCTCCAGCAGAACAGCGACAAGTGGCTGCTGCACTCTGTGCTGATGCTGGTGCAGTCCTGGATCGAGCCCATGGTTTATCTGCAGAGCACCCTGGACCGCTACGACGATGCGCCCGAGACTCTGCTCAATCGGACCAAGTGGGTTTCGGATAAATTGATCAGCCTGGAGCAAGGAGTGGTGTTCCTGATTCGCAAAATGCTGGAGGAAGGAAAGCTGAGTCCCGTGTCAGTGCATGAACCCGGGGTAGTGCAGGACGACGTGCATCCTGAAGTGCTGGAGTCCGTCCTCAGGGACTACACAGTGCTCACCTGCTTCAAGAAAGACGCCCACAGGATGGAGACCTTCCTGAAGCTCCTGAAGTGTCGCCAGACAGACAGGCTCAGCTGCGGCCTCTACTGAACGGGCTCAGCCTTGAAGAGTCTGTCTGGTAGTCTTTAGCAGATTTAGAGATAGAATTTATAGAAAT

Function

GO:

id name namespace
GO:0005576 extracellular region cellular_component
GO:0005179 hormone activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022679979.1 True 1225 mRNA 0.54 10 21631760 21699721

Neighbor

gene id symbol gene type direction distance location
pex11a LOC108431222,LOC107714788,LOC107556261,LOC107690406,LOC107715221,LOC107691149 coding upstream 170381 21457356 ~ 21461379 (+)
LOC103034933 LOC108431189,LOC101061116 coding upstream 260176 21355119 ~ 21371584 (+)
LOC103034607 si:dkeyp-59c12.1,LOC108431221,LOC105905574,LOC107715203 coding upstream 375800 21251704 ~ 21255960 (+)
rgma rgma,LOC107715216,LOC107690376,LOC107715612,LOC107693037 coding upstream 624470 20986624 ~ 21007290 (+)
lysmd4 NA coding upstream 879964 20745568 ~ 20751796 (+)
LOC103025486 fli1,LOC107692484,LOC106612965 coding downstream 300939 22000660 ~ 22061810 (+)
LOC103026111 LOC108434138 coding downstream 377757 22077478 ~ 22079758 (+)
LOC103026427 NA coding downstream 381473 22081194 ~ 22084499 (+)
LOC111194835 NA coding downstream 390842 22090563 ~ 22094253 (+)
LOC103027502 NA coding downstream 505436 22205157 ~ 22233055 (+)
G159868 NA non-coding upstream 122927 21508595 ~ 21508833 (+)
G159864 NA non-coding upstream 140009 21491389 ~ 21491751 (+)
G159836 NA non-coding upstream 188508 21435849 ~ 21443252 (+)
G159790 NA non-coding upstream 425089 21146273 ~ 21206671 (+)
G159781 slco3a1,LOC107690372,LOC107601651,LOC107715617,LOC107693030 non-coding upstream 505664 21089743 ~ 21126096 (+)
G159891 NA non-coding downstream 52784 21752505 ~ 21752999 (+)
G159896 NA non-coding downstream 147896 21847617 ~ 21850541 (+)
G159904 NA non-coding downstream 219028 21918749 ~ 21918994 (+)
G159919 NA non-coding downstream 408354 22108075 ~ 22109190 (+)
G159925 NA non-coding downstream 426823 22126544 ~ 22127679 (+)
fam174b NA other upstream 557187 21060656 ~ 21074573 (+)
G159748 chd2,LOC107715217,LOC107601632,LOC107549011,LOC107715589,LOC107690375 other upstream 619966 21009302 ~ 21011794 (+)
G159728 NA other upstream 894711 20736598 ~ 20737049 (+)
G159666 NA other upstream 1444841 20185516 ~ 20186919 (+)
necab2 necab2,LOC107694920,LOC107672281,LOC106573751 other upstream 3055323 18525528 ~ 18576437 (+)
G159926 LOC108434146,LOC108434147,LOC108434134 other downstream 448123 22147844 ~ 22152785 (+)
G160134 NA other downstream 1153691 22853412 ~ 22854081 (+)
G160306 NA other downstream 2419408 24119129 ~ 24119825 (+)
LOC103037315 LOC108435313,LOC107551446,LOC107714780 other downstream 4624099 26323820 ~ 26345682 (+)
LOC103021732 gramd1b,gramd1bb,LOC108264679 other downstream 4917541 26617262 ~ 26755313 (+)

Expression


Co-expression Network