LOC111194786


Basic Information

Item Value
gene id LOC111194786
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035914.1
NCBI id CM008317.1
chromosome length 41377133
location 27420486 ~ 27421684 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XR_002651271.1
tcagTCAGACCAGTGCTTTACTGAACTGGAGATACCACTGTGCTTTACTGCTCTCTAACTCAGCTCTACAGCTCACCTCTACACCTTCACCAGTGGCTCTATTGCAAGTCACTGGTGATCCACACAACACCGTGGGGAACAGACAGACTGTTCCCCTTTAACTGACCCTCATCCAGATACAGTTCCATTCCATCcacatcaacaacaacaacaaca

Function

GO:

id name namespace
GO:0044093 positive regulation of molecular function biological_process
GO:0065009 regulation of molecular function biological_process
GO:0033674 positive regulation of kinase activity biological_process
GO:0043085 positive regulation of catalytic activity biological_process
GO:0045860 positive regulation of protein kinase activity biological_process
GO:0031401 positive regulation of protein modification process biological_process
GO:0050790 regulation of catalytic activity biological_process
GO:0045937 positive regulation of phosphate metabolic process biological_process
GO:0042327 positive regulation of phosphorylation biological_process
GO:0051347 positive regulation of transferase activity biological_process
GO:0001934 positive regulation of protein phosphorylation biological_process
GO:0010562 positive regulation of phosphorus metabolic process biological_process

KEGG:

id description
ko05016 Huntington disease

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002651271.1 True 216 lncRNA 0.48 3 27420486 27421684

Neighbor

gene id symbol gene type direction distance location
LOC107196896 NA coding downstream 230 27419612 ~ 27420256 (-)
tiparp tiparp,LOC106613254 coding downstream 43749 27339409 ~ 27376737 (-)
lekr1 NA coding downstream 123487 27136682 ~ 27296999 (-)
ptx3 NA coding downstream 502818 26905211 ~ 26917668 (-)
LOC103047806 NA coding downstream 614152 26801289 ~ 26806334 (-)
LOC103029583 LOC108437982,LOC108264139 coding upstream 272059 27693743 ~ 27704738 (-)
gmps gmps coding upstream 297370 27719054 ~ 27751937 (-)
LOC103046178 LOC108437989,LOC108263992,LOC108434102,LOC108263974 coding upstream 562679 27984363 ~ 27988762 (-)
LOC111194787 NA coding upstream 570181 27991865 ~ 27996076 (-)
LOC103034808 NA coding upstream 594321 28016005 ~ 28020224 (-)
G161065 NA non-coding downstream 9778 27410488 ~ 27410708 (-)
G161062 NA non-coding downstream 12152 27408072 ~ 27408334 (-)
G161057 NA non-coding downstream 35908 27367862 ~ 27384578 (-)
G161042 NA non-coding downstream 225289 27191465 ~ 27195197 (-)
G161038 NA non-coding downstream 248548 27171404 ~ 27171938 (-)
G161136 NA non-coding upstream 270751 27692435 ~ 27703228 (-)
G161147 NA non-coding upstream 357040 27778724 ~ 27779787 (-)
LOC111194796 NA non-coding upstream 759931 28181615 ~ 28191026 (-)
LOC111194797 NA non-coding upstream 766312 28187996 ~ 28189702 (-)
LOC111194799 LOC108264117,LOC108434033,LOC108264121,LOC108264120 non-coding upstream 780636 28202320 ~ 28202855 (-)
G160979 ccnl1,ccnl1a,LOC107710830,LOC107684610,LOC107714439,LOC107691967,LOC107563513 other downstream 301233 27109707 ~ 27119253 (-)
LOC103037634 NA other downstream 1074777 26342351 ~ 26345709 (-)
G160715 NA other downstream 1681124 25738881 ~ 25739362 (-)
LOC103041696 NA other downstream 1817774 25600660 ~ 25602712 (-)
G160566 NA other downstream 1943639 25476094 ~ 25476847 (-)
kcnab1 kcnab1,LOC108263953,LOC107675612,LOC102797568 other upstream 8257 27429941 ~ 27578918 (-)
LOC111194804 NA other upstream 1171816 28593500 ~ 28652947 (-)
LOC103037190 NA other upstream 1465227 28886911 ~ 28941387 (-)
G161711 NA other upstream 2893922 30315606 ~ 30325858 (-)
LOC103042221 LOC105901649,LOC107568871,LOC105028370,LOC108413244,LOC567622,LOC103367052,LOC107379323,LOC100706402,LOC101466533 other upstream 3277486 30699170 ~ 30781708 (-)

Expression


Co-expression Network