G174031


Basic Information

Item Value
gene id G174031
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 7077771 ~ 7078247 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU235666
TAATTGCTTGTGGTGCAACAAGATGTAATTTAACACTGTTGGAGAGTACACAAGACTAAAGATGGATCAATTAGTGTTTTAGAGACCAATACCAATTGTCTTTCGGCTTGATTGGCCAATACCATTCAAGAATTAGGCTGGATGGCATGTTAAGGCATCATTGTGCATGTCCTCTGTAGCATTCTGTGTGTGGTCTTTTAATATGAAACATCCTTTGTTTTTTGGAATTGGCTACattataaaacactgttaaattcCAAGCACAAGCTGTGAACTCGTGAATTCCCATCCAAAACTGCACTGTCATCATTACTCATCGATACACATTGTCGAAGGCTGAGTGATGTATatatagtttagtt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU235666 True 362 lncRNA 0.37 2 7077771 7078247

Neighbor

gene id symbol gene type direction distance location
LOC103040555 arl15b,LOC108433533,LOC107713334,LOC107595536,LOC107744085,LOC107686429,LOC108276853 coding upstream 319322 6661512 ~ 6758449 (+)
LOC103040857 LOC108433505 coding upstream 456614 6594232 ~ 6621157 (+)
LOC103038257 anxa3 coding upstream 587100 6478050 ~ 6490671 (+)
mrrf mrrf coding upstream 618460 6427802 ~ 6459311 (+)
morn5 NA coding upstream 738625 6319616 ~ 6339146 (+)
LOC103041127 LOC108435809,LOC108277236 coding downstream 23259 7101506 ~ 7140740 (+)
ksr1 LOC107741140,LOC107583358,LOC107653729 coding downstream 68149 7146396 ~ 7201824 (+)
LOC103047365 NA coding downstream 128834 7207081 ~ 7217675 (+)
LOC103040527 LOC108435812,LOC106567758,LOC106603288 coding downstream 142124 7220371 ~ 7292479 (+)
LOC103046439 NA coding downstream 220716 7298963 ~ 7312844 (+)
G174016 LOC108411648,LOC108276885 non-coding upstream 86995 6988724 ~ 6990776 (+)
G174000 NA non-coding upstream 112134 6920896 ~ 6965637 (+)
G173953 LOC108433532 non-coding upstream 434835 6642417 ~ 6642936 (+)
G173948 NA non-coding upstream 440657 6618834 ~ 6637114 (+)
G173946 NA non-coding upstream 451483 6597148 ~ 6626288 (+)
G174140 NA non-coding downstream 214635 7292882 ~ 7296362 (+)
LOC103045725 NA non-coding downstream 280338 7358585 ~ 7381032 (+)
G174170 NA non-coding downstream 566682 7644929 ~ 7645551 (+)
G174176 LOC108435816 non-coding downstream 589154 7667401 ~ 7671860 (+)
G174256 usp25,LOC107680319 non-coding downstream 805469 7883716 ~ 7892563 (+)
LOC103041160 NA other upstream 536392 6536327 ~ 6541379 (+)
G173501 NA other upstream 1893994 5183491 ~ 5183777 (+)
nrarp nrarp,nrarpa other upstream 1924935 5103727 ~ 5152836 (+)
ptbp3 ptbp3,LOC106592370 other upstream 2173569 4800629 ~ 4904202 (+)
G173397 NA other upstream 2333522 4743569 ~ 4744249 (+)
G174259 usp25 other downstream 826348 7904595 ~ 7925440 (+)
acer3 acer3,LOC107653723,LOC107758701,LOC107680329,LOC107743427 other downstream 1070872 8149119 ~ 8166662 (+)
LOC103038455 NA other downstream 1470637 8548884 ~ 8552610 (+)
rexo2 NA other downstream 2048461 9126708 ~ 9153133 (+)
LOC103028819 etf1,etf1b,LOC108437808,LOC107552075 other downstream 3542781 10621028 ~ 10631765 (+)

Expression


Co-expression Network