G174366


Basic Information

Item Value
gene id G174366
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 8230308 ~ 8230617 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU236120
tattgtggtgacggacagttctggtggaaacaggagagttgaggtgcacattgaattctgcgtgatttgatcagccgtggttttatgttttttggatacaatccgggttagcacccgaacatccctttcagacagcttcctcttacagcgtccacagttaatcctgttggatgtggttggttcttcttggcggtatgctgacattaccctggataccgtggctcttgatgcatcacaaagacttgctgtcttggtcacagatgctccagcaagacgtgcaccaacaatttgtcctcttttgtcctctggt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU236120 True 310 lncRNA 0.47 1 8230308 8230617

Neighbor

gene id symbol gene type direction distance location
LOC103038343 NA coding upstream 6975 8216792 ~ 8223333 (+)
LOC103041846 LOC108433277 coding upstream 21023 8188729 ~ 8209285 (+)
LOC103041345 LOC108433277 coding upstream 32147 8195096 ~ 8198161 (+)
LOC103038651 NA coding upstream 38569 8189220 ~ 8191739 (+)
LOC103038957 NA coding upstream 43812 8173875 ~ 8186496 (+)
LOC111195015 LOC108433251 coding downstream 3194 8233811 ~ 8241060 (+)
LOC107197515 NA coding downstream 15269 8245886 ~ 8249321 (+)
LOC103038016 NA coding downstream 22285 8252902 ~ 8260391 (+)
acat1 acat1,LOC107653722,LOC107583377,LOC107758700,LOC107565255,LOC107679529 coding downstream 30329 8260946 ~ 8269363 (+)
tmprss2 NA coding downstream 43585 8274202 ~ 8287408 (+)
G174263 NA non-coding upstream 165507 8006273 ~ 8064801 (+)
G174255 usp25 non-coding upstream 326466 7902800 ~ 7903842 (+)
G174256 usp25,LOC107680319 non-coding upstream 337745 7883716 ~ 7892563 (+)
G174176 LOC108435816 non-coding upstream 558448 7667401 ~ 7671860 (+)
G174170 NA non-coding upstream 584757 7644929 ~ 7645551 (+)
G174408 NA non-coding downstream 267838 8498455 ~ 8498951 (+)
G174424 NA non-coding downstream 331893 8562510 ~ 8562865 (+)
G174438 NA non-coding downstream 424907 8655524 ~ 8658542 (+)
G174559 NA non-coding downstream 861824 9092441 ~ 9094096 (+)
LOC111195017 NA non-coding downstream 909532 9140149 ~ 9141298 (+)
acer3 acer3,LOC107653723,LOC107758701,LOC107680329,LOC107743427 other upstream 63646 8149119 ~ 8166662 (+)
G174259 usp25 other upstream 304868 7904595 ~ 7925440 (+)
LOC103041160 NA other upstream 1688929 6536327 ~ 6541379 (+)
G173501 NA other upstream 3046531 5183491 ~ 5183777 (+)
nrarp nrarp,nrarpa other upstream 3077472 5103727 ~ 5152836 (+)
LOC103038455 NA other downstream 318267 8548884 ~ 8552610 (+)
rexo2 NA other downstream 896091 9126708 ~ 9153133 (+)
LOC103028819 etf1,etf1b,LOC108437808,LOC107552075 other downstream 2390411 10621028 ~ 10631765 (+)
G174874 LOC108437803 other downstream 2601551 10832168 ~ 11019418 (+)
G174994 NA other downstream 3199254 11429871 ~ 11436530 (+)

Expression


Co-expression Network