G174438


Basic Information

Item Value
gene id G174438
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 8655524 ~ 8658542 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU236222
TAAAGCTATTGGTACAGTATAACAGTAGTACATGGCTGTagctttacagttttaaaaaatgtgaaaaaacatttgtgattAATTATGCCATAGCTGAAAATCTCAGCTCCTGAGTTTTGTGTTTAAGTGCTGGGTGAAGCACCATGGATGTGTTTTAGCATCTTAATAATAAAAGGCTgtcgaaaaaaaaacatgttcagttTTCCTGATTAATCTCTGAATCTCTGGCTGTAAACAAAGAACAATTTTAAGGGCGATAACGAGCATCTGACCCATGTCCTCTTCACACTGGTTATGAAACCTGTTTATTTCTTTGCCTTCTTCGTGAGCATTTCCATGATGGACGCTGATTTTCGTTTCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU236222 True 362 lncRNA 0.36 2 8655524 8658542

Neighbor

gene id symbol gene type direction distance location
stt3a stt3a coding upstream 9399 8636585 ~ 8646125 (+)
ei24 ei24,LOC106567936,LOC106603545 coding upstream 20577 8623211 ~ 8634947 (+)
LOC103036350 LOC108433269 coding upstream 52777 8586183 ~ 8602747 (+)
dscam dscama,LOC108433273,LOC108277288,LOC107653721,LOC107758699,LOC107679528 coding upstream 206368 8317232 ~ 8449156 (+)
tmprss2 NA coding upstream 368116 8274202 ~ 8287408 (+)
dcps dcps,LOC107577914,LOC107577915 coding downstream 7954 8666496 ~ 8673111 (+)
kcnj1 kcnj1,LOC108433247 coding downstream 19697 8678239 ~ 8683951 (+)
kirrel3 kirrel3,kirrel3a,LOC107730946,LOC107758686,LOC107565265 coding downstream 159045 8817587 ~ 9090793 (+)
LOC103036746 LOC108433260,LOC105011014,LOC106567546,LOC108276559 coding downstream 548010 9206552 ~ 9313383 (+)
LOC103036148 gramd1ba,LOC107679517,LOC107730968,LOC108433258 coding downstream 696366 9354908 ~ 9498192 (+)
G174424 NA non-coding upstream 92659 8562510 ~ 8562865 (+)
G174408 NA non-coding upstream 156573 8498455 ~ 8498951 (+)
G174366 NA non-coding upstream 424907 8230308 ~ 8230617 (+)
G174263 NA non-coding upstream 590723 8006273 ~ 8064801 (+)
G174255 usp25 non-coding upstream 751682 7902800 ~ 7903842 (+)
G174559 NA non-coding downstream 433899 9092441 ~ 9094096 (+)
LOC111195017 NA non-coding downstream 481607 9140149 ~ 9141298 (+)
G174583 NA non-coding downstream 655362 9313904 ~ 9314138 (+)
G174582 NA non-coding downstream 660848 9319390 ~ 9321343 (+)
G174609 NA non-coding downstream 712899 9371441 ~ 9373948 (+)
LOC103038455 NA other upstream 102914 8548884 ~ 8552610 (+)
acer3 acer3,LOC107653723,LOC107758701,LOC107680329,LOC107743427 other upstream 488862 8149119 ~ 8166662 (+)
G174259 usp25 other upstream 730084 7904595 ~ 7925440 (+)
LOC103041160 NA other upstream 2114145 6536327 ~ 6541379 (+)
G173501 NA other upstream 3471747 5183491 ~ 5183777 (+)
rexo2 NA other downstream 468166 9126708 ~ 9153133 (+)
LOC103028819 etf1,etf1b,LOC108437808,LOC107552075 other downstream 1962486 10621028 ~ 10631765 (+)
G174874 LOC108437803 other downstream 2173626 10832168 ~ 11019418 (+)
G174994 NA other downstream 2771329 11429871 ~ 11436530 (+)
G175108 NA other downstream 3250330 11908872 ~ 11913456 (+)

Expression


Co-expression Network