G174811


Basic Information

Item Value
gene id G174811
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 10666950 ~ 10667180 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU236688
ttTTTGCACAATGCTGTATAAGAGAAATCAATGTctgaatgtaatgtaatgaaatcaTTCTTACCGAATTTATCCCCATCCTCTCCTCTGGCCTGGATCTTCCTGCCAAGCACCTGCACATGCTTGCCGCTGGTCCTGCTGTACAGCTGGTACACACGGTGATGCCTTCTGCTCAGACTATCCCTCACGCCTGTCTGGTTCTCCACATGTTCCCCAAAATCAACACTGTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU236688 True 231 lncRNA 0.48 1 10666950 10667180

Neighbor

gene id symbol gene type direction distance location
LOC103029337 fbxw11,LOC108277126,LOC105905987,LOC106603254,LOC107687420,LOC106568099,LOC107678030 coding upstream 12147 10633834 ~ 10654803 (+)
LOC103035292 trpc7a,LOC108437819,LOC107552051,LOC107677994,LOC108277129,LOC107720592,LOC105905985,LOC106603261 coding upstream 52481 10588031 ~ 10614469 (+)
LOC111194980 NA coding upstream 358257 10305916 ~ 10308693 (+)
LOC103033609 NA coding upstream 908466 9752333 ~ 9758484 (+)
LOC103030527 NA coding upstream 935959 9723554 ~ 9730991 (+)
LOC103034638 LOC108437817 coding downstream 23662 10690842 ~ 10695462 (+)
LOC107197089 LOC107197089,LOC108437815 coding downstream 29379 10696559 ~ 10704898 (+)
LOC111195028 LOC108437795 coding downstream 40144 10707324 ~ 10709830 (+)
LOC111195025 NA coding downstream 43327 10710507 ~ 10713283 (+)
LOC111195103 NA coding downstream 46926 10714106 ~ 10716445 (+)
G174810 NA non-coding upstream 1522 10665077 ~ 10665428 (+)
G174809 LOC103034963,LOC108437818,LOC108276546 non-coding upstream 3456 10661290 ~ 10663494 (+)
G174807 NA non-coding upstream 11261 10655043 ~ 10655689 (+)
G174801 LOC103045071 non-coding upstream 94051 10572480 ~ 10572899 (+)
G174798 NA non-coding upstream 96788 10537086 ~ 10570162 (+)
G174812 NA non-coding downstream 3718 10670898 ~ 10671171 (+)
G174813 NA non-coding downstream 8536 10675716 ~ 10676001 (+)
G174930 NA non-coding downstream 420539 11087719 ~ 11088839 (+)
LOC103022678 NA non-coding downstream 426537 11093717 ~ 11095900 (+)
G174944 NA non-coding downstream 470369 11137549 ~ 11137957 (+)
LOC103028819 etf1,etf1b,LOC108437808,LOC107552075 other upstream 35185 10621028 ~ 10631765 (+)
rexo2 NA other upstream 1513817 9126708 ~ 9153133 (+)
LOC103038455 NA other upstream 2114340 8548884 ~ 8552610 (+)
acer3 acer3,LOC107653723,LOC107758701,LOC107680329,LOC107743427 other upstream 2500288 8149119 ~ 8166662 (+)
G174259 usp25 other upstream 2741510 7904595 ~ 7925440 (+)
G174874 LOC108437803 other downstream 164988 10832168 ~ 11019418 (+)
G174994 NA other downstream 762691 11429871 ~ 11436530 (+)
G175108 NA other downstream 1241692 11908872 ~ 11913456 (+)
LOC103027177 tmem261,LOC103027177 other downstream 1524176 12191356 ~ 12209449 (+)
rnft1 rnft1 other downstream 1856961 12524141 ~ 12540201 (+)

Expression


Co-expression Network