CI01000012_13619458_13633023 (GDH1, GLUD1B, GLUD1A, GDH2, GDH3.2, GLUD1, GDH03, GDH01, GLUD1.S)


Basic Information

Item Value
gene id CI01000012_13619458_13633023
gene name GDH1, GLUD1B, GLUD1A, GDH2, GDH3.2, GLUD1, GDH03, GDH01, GLUD1.S
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 13619009 ~ 13633801 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000012_13619458_13633023.mRNA
ATATATATTAGCCTACATATTAAAAAAAAAAACATTTTCCCCCACAAATATATATTAATTTTTATTTTATTTTTTGAGTGAGATTATTATTATTATTATAGATTATATACATATGTATACGTTTAGGCAACACATTTGGACAGCAGCAACTTTAATACTTTTAACATATTTTTTGTAATACTTTTGCCCTAGGTTGCAAACACTTCAAAGCATGTTTGCTTATGGTTCCTGCTCTCTGAGCGCCTCCCAGCTTGAGGTGGAGACCCACGGCACGCCTGTCTGACTGTTAAAACAACTCGCCAACAGTATTCAAGCCGACACTTTATTTAGTGTAGCAGAAAAGGAGCCGTCGTGGTGTCCGTTTATTCACCCTGACCCACTCTTTGACACTGTCTGTCTTAGTTTTTTCCCTTTATAGATATTGTTAGTTAGTGTGTTAGTTCAAAGTCATGTATAGGTATTTGGGGGAGCTCGTCACACGCGCAGCCGCCAGCAGCTCGCTGGCCTCGGGATGCGTCGATTCCGCTCTGCCCGCTTCGGCGACTCTAATGCGGGTCCGCCGTTACAGCGAAGCCGTAGGAGAAAAAGACGATGACCCTAACTTCTTTAGGATGGTCGAGGGTTTCTTCGACCGCGGAGCTTCTATCGTGGAGGACAAACTCGTGCACGATCTCAAGACAAGAGAAACGCCTGAGCAGAAGAGGCACCGAGTCCGAGGGATCCTCAAGATCATCAAGCCTTGCAACCATGTCCTGTCCGTGTCATTCCCCATCAAGAGAGACAACGGGGAGTGGGAGATGATCGAGGGCTACAGAGCTCAACACAGCCAGCACAGGACTCCGTGTAAAGGAGGTATCCGTTATAGCACAGAGGTGTCAGTCGATGAGGTGAAAGCCCTTGCCTCACTAATGACATACAAATGTGCAGTTGTAGATGTGCCTTTTGGAGGAGCTAAAGCTGGAGTGAAAATTAACCCAAAGAATTACTCTGACACAGAACTGGAGAAGATCACAAGAAGGTTTACCATTGAATTGGCTAAAAAGGGCTTCATTGGGCCTGGCATTGATGTCCCCGCCCCAGATATGAGCACAGGAGAAAGGGAAATGTCCTGGATTGCTGACACGTATGCTAACACAATGGGCCATCATGATATCAATGCTCATGCCTGTGTTACCGGTAAGCCCATCAGCCAGGGTGGCATCCACGGTCGTATATCTGCCACTGGTCGTGGAGTCTTCCATGGCATTGAAAACTTTGTCAATGAGGCTGCTTATATGAGCCAGCTGGGACTGACTCCTGGGTTTGGAGACAAGACGTTTGTCATTCAGGGTTTTGGTAATGTGGGCCTGCACTCCATGCGTTATCTGCACCGTTACGGAGCAAAGTGTGTGGGCGTAGGAGAGGTGGACGGAAGCATCTGGAACCCTAACGGCATCGATCCCAAAGAGCTGGAAGACTATAAGCTGGCCAATGGCACGATTGTTGGCTTCCCCAAGGCCACCCCATATGAAGGCAGCATTTTGGAAGCTCAGTGTGATATCCTGATCCCTGCTGCAAGTGAAAAACAGCTTACAAAGAAAAACGCCAACAATATCAAAGCCAAGATCGTTGCTGAAGGAGCCAACGGTCCCACTACACCTGAGGCAGATAAGATATTTCTAGAGAGGAATATCATGGTGATCCCTGACATGTACCTGAATGCTGGAGGTGTGACGGTCTCCTACTTTGAGTGGCTGAAGAACCTTAACCACGTCAGTTATGGCAGACTGACCTTCAAATACGAAAGGGACTCAAACTACCATCTCCTTATGTCTGTCCAGGAAAGTCTGGAAAGGAAGTTTGGGAAACATGGTGGAGCCATACCTATTGTCCCCACATCTGAATTTCAAGACAGGATTGCTCAAATCATGCGCACAGCCAACAGGTATAACCTTGGGCTGGACCTGAGGACAGCTGCCTATGTCAACGCCATTGAGAAAGTCTTCAAAGTGTACCATGAGGCTGGCCTTACGTTCACATAGACGGTTGTATTATTCACCTGACTCTGTATATCTAAGTCTGCACAGACCTGAGTCACTTAACCCTACAGCACCTCACGTTTACATTTTATACATCAAAATGTGTCATATCATTTATGCATGTGGTTACCAATATGCATCTTTAGAAGCTTCTATTCTTGTCTAGTTCATCATCCTTTCAAATATTCATAGCTTTTAGAAAAGCCTTTAAGCCAAAGTCCCTTTAATTCACTCTCTTTGTCACATTTCAGAGCATAGTGGGAATGTCTTGCCAGGAAACACCAAAAATCGATAACAATCTAACTTATTTTAGAGCTACAGTATTTCAAAGCTTTGTAATGTTTTCTTTAGGCCATGTGTTAATGAAGTAGTTACTGAAAACATTAAGCCTTATAGTTACAGCCGTAAACTTGAACACTGTTGTTTCTAAAACCAGTTTCTAGAATTTCCAGTTAGTTACTTTTTTCCCCCCACCCATTTTGACAAAAATGTGGTCAATTGGGAAAGGGATACAGGATGAATCTCAGGCTTTTTATATGTTACCAAAATATTGCACATAAATATCTGGTTTTGCTGCTCTTTAGAATAGTCTTCAGTAATAACCCAATGCCTTCATTTAAAAAAAAACCTTATTGGTAAATGTTTAATTTCTTAACAATATGGAAATGGTAGGGCATATATTTGGGAGAAAATGTTTATTTTTGTCATATTAGCATTTATTATGAATTAGCCTTTGAAAAAAAAAAGACTTTGTATTGCCTTTTTAAATTGTCTAAATTTA

Function

symbol description
glud1a Predicted to enable glutamate dehydrogenase (NAD+) activity. Predicted to be involved in glutamate catabolic process. Predicted to act upstream of or within cellular amino acid metabolic process. Predicted to be active in mitochondrion. Is expressed in several structures, including cardiovascular system; digestive system; nervous system; periderm; and pronephros. Human ortholog(s) of this gene implicated in familial hyperinsulinemic hypoglycemia 6; hyperinsulinism; and hypoglycemia. Orthologous to human GLUD1 (glutamate dehydrogenase 1).
glud1b Predicted to enable glutamate dehydrogenase (NAD+) activity. Predicted to be involved in glutamate catabolic process. Predicted to act upstream of or within cellular amino acid metabolic process. Predicted to be active in mitochondrion. Is expressed in several structures, including blastomere; digestive system; fin; mesoderm; and tail bud. Human ortholog(s) of this gene implicated in familial hyperinsulinemic hypoglycemia 6; hyperinsulinism; hypoglycemia; and late onset Parkinson's disease. Orthologous to several human genes including GLUD1 (glutamate dehydrogenase 1).
glud1 Enables anion binding activity and glutamate dehydrogenase (NAD+) activity. Involved in glutamate biosynthetic process; glutamate catabolic process; and positive regulation of insulin secretion. Located in endoplasmic reticulum and mitochondrion. Implicated in familial hyperinsulinemic hypoglycemia 6; hyperinsulinism; and hypoglycemia. Biomarker of Alzheimer's disease.
gdh2 Enables glutamate dehydrogenase (NAD+) activity. Involved in nitrogen compound metabolic process. Located in mitochondrion.
gdh1 Enables glutamate dehydrogenase (NADP+) activity. Involved in glutamate biosynthetic process. Located in nucleus. Human ortholog(s) of this gene implicated in familial hyperinsulinemic hypoglycemia 6; hyperinsulinism; hypoglycemia; and late onset Parkinson's disease. Orthologous to human GLUD1 (glutamate dehydrogenase 1) and GLUD2 (glutamate dehydrogenase 2).

GO:

id name namespace
GO:0032024 positive regulation of insulin secretion biological_process

KEGG:

id description
K00261 GLUD1_2, gdhA; glutamate dehydrogenase (NAD(P)+)

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000012_13619458_13633023.mRNA True 2799 mRNA 0.43 12 13619009 13633801

Neighbor

gene id symbol gene type direction distance location
CI01000012_13559514_13590448 PSD coding upstream 28516 13559514 ~ 13590493 (+)
CI01000012_13551086_13554035 NA coding upstream 64697 13550773 ~ 13554312 (+)
CI01000012_13533459_13538332 PBLD2, PBLD coding upstream 80566 13533390 ~ 13538443 (+)
CI01000012_13527966_13529695 PBLDP, PBLD coding upstream 89247 13527184 ~ 13529762 (+)
CI01000012_13522084_13525252 PBLD2, PBLD coding upstream 93690 13522084 ~ 13525319 (+)
CI01000012_13653033_13672573 NA coding downstream 19232 13653033 ~ 13672988 (+)
G76584 NA non-coding upstream 25741 13591499 ~ 13593268 (+)
G76630 NA non-coding upstream 61322 13557425 ~ 13557687 (+)
G76629 NA non-coding upstream 62779 13555993 ~ 13556230 (+)
G76594 NA non-coding upstream 79830 13538521 ~ 13539179 (+)
G76657 NA non-coding downstream 65086 13698887 ~ 13701764 (+)
G76656 NA non-coding downstream 105372 13703487 ~ 13739731 (+)
G76669 NA non-coding downstream 111116 13744917 ~ 13745623 (+)
CI01000012_13029637_13033226 RGS17 other upstream 580110 13029435 ~ 13038899 (+)
G76374 NA other upstream 869840 12745531 ~ 12749169 (+)
G76385 NA other upstream 943343 12630755 ~ 12675666 (+)
G75533 NA other upstream 2473270 11144817 ~ 11145739 (+)
CI01000012_10223957_10235955 NA other upstream 3394722 10223697 ~ 10236276 (+)
G76645 NA other downstream 18058 13651859 ~ 13652234 (+)

Expression


Co-expression Network