G174994


Basic Information

Item Value
gene id G174994
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 11429871 ~ 11436530 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU236978
gaggaggaggaggaggctgcTCCGAGGAACGGCGGAAAACCGCAGAGGCAGAGAGATGCTTCCGTTACCGGATTGTACGATACAGCGGACATGCCTGAGCTCCTGCCCCCCTGCAGTCCCTTCAGATCAAAAGACAGAGACCCTCGCCTaatgcagaacacacacatcCTCACAGAGACGGGCATGGACCGCCTCAGTCTCAGTGACCAGCCCGAGTGTCCGCAACACAGGACCAGCCAGAGGGCACCAAAGCTCGGGCAGATCGGGCGGTCCAAGAGAGTGGTGATCGAGGACGAGGACCTGGACGACGTGCTGAACAACAACGAAGAGCTGCCGGTTACCctgaaccacagtccagcctGAGGAGCAGCGCACCTGCATCCAATTTCGCCCTACTCTGGCTCTCTCTCGCTGCTGCGCATGCGCAATCACCTGTAACGCGTCAGTCCATCACCTGTAGTTTAGTGGCAGTTTCGCGCGCTAAGGTGGAGGTGTGCTCAGGTGGGGCTTGGTGGGCGGAGCCACAGTTACGTAAAAAGCTGATTTAAGATGATAGGCCAATGTTGAAAGAAAATAACAGCAATGTATCGGAATGAGATTTATAGCGATATATGTAGAGTTGGGGgtttaaagcatttttgttttgtgtctttatgtttttattgatttatgatGAGTATTActcttattatatttatttgtcaaTATGAAtatcataattattattgttttgttttttttgtccgaTAAAATTTTTATTGTTGCTAATTCTGACTGCACTATTCACCAGAGGTTTGCATTCTTCTGATTTTATGccttattattactattattaataataacaatgttaaTATTCCCTTAGATCAACGAGAGACCATTGAGACCACTGTAAATCgttatgcatgtgtgtttgcaGTGCAGTTCTCCTTTAAACGTGTTCATATGTTTACTTTGTTGGATTGagagttgattttttttgttgtctatGTTTGCAGCAGTTATTCATGATGATTAGACaatttatttacacacataatgtcaaaataaatacatataaacataattatatTATGATAAAGCGAGGTTAAATAGAACAAAAGCACATACGTTCACAGGGAACACAGTCACACAGACTATATctccagctgtgtgtgtttttttttttaatgctgtgtttcttaattttcagtattttttttttttttttcattttatttgtagtGTGTTGTTACTTATATTGACCGCAAGGTGGAGACAAATCCAAAGGATAGatcctctgctgctgctgctgctgcatgtgctgctgtttatttggattttacAGCTTTGAATGCTGCTGATTAAATGTGTCACTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU236978 True 1355 TUCP 0.42 2 11429871 11436530

Neighbor

gene id symbol gene type direction distance location
LOC103023833 LOC107678029 coding upstream 95838 11324888 ~ 11334033 (+)
LOC103024145 kcnip1b,LOC103024145,LOC108444575,LOC107720696,LOC107552061,LOC102788752,LOC103363037,LOC107742366,LOC107676032,LOC107586147 coding upstream 107536 11250375 ~ 11322335 (+)
LOC103030157 NA coding upstream 271683 11154950 ~ 11158188 (+)
LOC103029829 NA coding upstream 304127 11113815 ~ 11125744 (+)
LOC103022370 LOC103022370 coding upstream 345224 11081892 ~ 11084647 (+)
LOC103027020 nlgn2b,LOC108443341,LOC107678031,LOC107554306,LOC107720555,LOC101475673,LOC102787387 coding downstream 313683 11750213 ~ 11865916 (+)
LOC111195033 NA coding downstream 499130 11935660 ~ 11939097 (+)
LOC107197312 NA coding downstream 551639 11988169 ~ 11993224 (+)
LOC111195107 NA coding downstream 654098 12090628 ~ 12095289 (+)
cnih2 cnih2,LOC100706298 coding downstream 707521 12144051 ~ 12151050 (+)
G174986 NA non-coding upstream 13278 11410097 ~ 11416593 (+)
G174983 NA non-coding upstream 28258 11401393 ~ 11401613 (+)
G174964 NA non-coding upstream 164749 11190481 ~ 11265122 (+)
G174944 NA non-coding upstream 291914 11137549 ~ 11137957 (+)
LOC103022678 NA non-coding upstream 333971 11093717 ~ 11095900 (+)
G174997 NA non-coding downstream 2611 11439141 ~ 11439725 (+)
G174998 cldn7,LOC108444573,LOC107552057,LOC107586151,LOC107676017 non-coding downstream 5822 11442352 ~ 11460006 (+)
G175004 NA non-coding downstream 60418 11496948 ~ 11503865 (+)
G175065 NA non-coding downstream 162491 11599021 ~ 11599233 (+)
G175068 NA non-coding downstream 201724 11638254 ~ 11638491 (+)
G174874 LOC108437803 other upstream 410453 10832168 ~ 11019418 (+)
LOC103028819 etf1,etf1b,LOC108437808,LOC107552075 other upstream 798106 10621028 ~ 10631765 (+)
rexo2 NA other upstream 2276738 9126708 ~ 9153133 (+)
LOC103038455 NA other upstream 2877261 8548884 ~ 8552610 (+)
acer3 acer3,LOC107653723,LOC107758701,LOC107680329,LOC107743427 other upstream 3263209 8149119 ~ 8166662 (+)
G175108 NA other downstream 472342 11908872 ~ 11913456 (+)
LOC103027177 tmem261,LOC103027177 other downstream 754826 12191356 ~ 12209449 (+)
rnft1 rnft1 other downstream 1087611 12524141 ~ 12540201 (+)
G175379 cltc,LOC108250671,LOC106581108,LOC107693955,LOC106612978 other downstream 1302973 12739503 ~ 12745053 (+)
LOC103028411 LOC108444524,LOC107720618,LOC559907,LOC108276802 other downstream 1856768 13293298 ~ 13329018 (+)

Expression


Co-expression Network