G176043


Basic Information

Item Value
gene id G176043
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 13563806 ~ 13564134 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU238408
aaagtctccttaAATCATTGTATTTGCTCGATATACTACTTGATATCCTCTTAATAACTTTTGGTGTCCTATTGCTAATGCTTGATGTTGGCTTAATAATGATCGGTATATTCTTGATAATGATTGGTAAACTCCACTTGGTATCCTCTTGATAACTCTTGGTATACGCTTGGTATCCTCTTGATAACTTCTGGTATCCTGTTGATAACTTTTGATATTCTCTTGATAACGCTTGGTATCCTCTTGATATTGTCTTGATAACTCTTGGTATCCTCTTAATAATGCTTGTTATCCTCT

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0005201 extracellular matrix structural constituent molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU238408 True 297 lncRNA 0.34 2 13563806 13564134

Neighbor

gene id symbol gene type direction distance location
LOC103032814 LOC108444522,LOC107701105,LOC107718794 coding downstream 27206 13509334 ~ 13536600 (-)
LOC111195110 NA coding downstream 82669 13453260 ~ 13481137 (-)
htatsf1 htatsf1 coding downstream 113534 13439661 ~ 13450272 (-)
LOC103031773 NA coding downstream 124702 13434564 ~ 13439104 (-)
f9 NA coding downstream 226346 13328994 ~ 13337460 (-)
LOC103047751 LOC108276801,LOC107728853,LOC107577624,LOC107686144 coding upstream 30302 13594436 ~ 13715147 (-)
LOC103021466 NA coding upstream 153728 13717862 ~ 13727146 (-)
mdh2 mdh2,LOC107588934,LOC107691667 coding upstream 192110 13756244 ~ 13764183 (-)
LOC103039046 myl10,LOC108413922,LOC107734439,LOC108276823,LOC107577538,LOC107728843,LOC107588876 coding upstream 370892 13935026 ~ 13938274 (-)
ppm1e ppm1e,LOC102780278 coding upstream 578040 14142174 ~ 14222311 (-)
G176017 NA non-coding downstream 179282 13383587 ~ 13384524 (-)
LOC111195045 NA non-coding downstream 364845 13197213 ~ 13198961 (-)
G175715 NA non-coding downstream 381127 13052910 ~ 13182679 (-)
G176069 NA non-coding upstream 175462 13739596 ~ 13740266 (-)
G176099 NA non-coding upstream 303672 13867806 ~ 13868388 (-)
G176145 NA non-coding upstream 485697 14049831 ~ 14050301 (-)
G176147 LOC108415819,LOC107588830 non-coding upstream 494034 14058168 ~ 14058447 (-)
G176148 LOC108415819 non-coding upstream 498660 14062794 ~ 14063219 (-)
LOC111195047 LOC107688027,LOC107751101,LOC107731862,LOC106606817,LOC106579815,LOC107570926,LOC107688028,LOC107689570,LOC107565351 other downstream 156526 13405281 ~ 13407280 (-)
LOC103044870 NA other downstream 309238 13252157 ~ 13254568 (-)
LOC111195039 NA other downstream 556745 13003387 ~ 13007061 (-)
G175707 NA other downstream 566872 12988937 ~ 12996934 (-)
G175647 NA other downstream 665176 12897040 ~ 12898630 (-)
G176058 NA other upstream 107638 13671772 ~ 13674482 (-)
LOC111195111 NA other upstream 182502 13746636 ~ 13748650 (-)
tex14 NA other upstream 210669 13774803 ~ 13814510 (-)
G176146 LOC108415819 other upstream 487428 14051562 ~ 14051961 (-)
G176136 LOC108415819 other upstream 499366 14063500 ~ 14066144 (-)

Expression


Co-expression Network