G176179


Basic Information

Item Value
gene id G176179
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035916.1
NCBI id CM008319.1
chromosome length 36262418
location 14273468 ~ 14274362 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU238605
ctgcggtccaatctgaagggagctgcccaACTAGGCAGCATTTTCAGGCAGCATAGGCGCGCTCCCGAGAAAAGGACTGTCCCATTCGGAAGGTAGCATGTGCTGCCTACCTGGGCAGCTGCCTTATTTTACCCCGATTCTGAAGGCAGCGTGAGATGTATCCTTCACGGCGAaggcaatcccatgatgcatttcaccagatcagagttccagcgctcagatttaaaaacatggcgGACGGAGCCGGCACTGCCACGGAgtttctgtacaaatggATGAACGTGGGCCGGGGAAGGTGAACTCTggtcagaccggctggaggcagcgttagctccctttatgaatataatttttttttctttgaatgtaataaagttttctctcttaacatta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU238605 True 393 lncRNA 0.50 2 14273468 14274362

Neighbor

gene id symbol gene type direction distance location
zbtb21 zbtb21 coding downstream 16248 14248668 ~ 14257220 (-)
rad51c rad51c coding downstream 29368 14229557 ~ 14244100 (-)
ppm1e ppm1e,LOC102780278 coding downstream 51157 14142174 ~ 14222311 (-)
LOC103039046 myl10,LOC108413922,LOC107734439,LOC108276823,LOC107577538,LOC107728843,LOC107588876 coding downstream 335194 13935026 ~ 13938274 (-)
mdh2 mdh2,LOC107588934,LOC107691667 coding downstream 509285 13756244 ~ 13764183 (-)
LOC103043578 LOC108411121 coding upstream 11576 14285938 ~ 14314833 (-)
LOC103045094 NA coding upstream 418318 14692680 ~ 14714840 (-)
LOC103045405 LOC103045405,LOC108442105 coding upstream 441149 14715511 ~ 14720986 (-)
LOC103045698 NA coding upstream 457239 14731601 ~ 14736873 (-)
LOC103046216 lhfp,LOC103046216,LOC108442104,LOC107691645,LOC107577306,LOC107751385,LOC107746987,LOC107589696,LOC107686123 coding upstream 468954 14743316 ~ 14795102 (-)
G176154 NA non-coding downstream 167390 14101882 ~ 14106078 (-)
G176134 rabgef1,LOC107734461 non-coding downstream 174790 14096250 ~ 14098678 (-)
G176139 rabgef1,LOC107734461,LOC107728875,LOC107577469 non-coding downstream 183353 14087099 ~ 14090115 (-)
G176150 kctd7,LOC106603469,LOC108415927 non-coding downstream 193381 14076346 ~ 14080087 (-)
G176148 LOC108415819 non-coding downstream 210249 14062794 ~ 14063219 (-)
G176184 NA non-coding upstream 44359 14318721 ~ 14352127 (-)
G176203 NA non-coding upstream 297648 14572010 ~ 14572473 (-)
G176248 NA non-coding upstream 453976 14728338 ~ 14728932 (-)
G176277 NA non-coding upstream 565144 14839506 ~ 14844568 (-)
G176308 NA non-coding upstream 680941 14955303 ~ 14955563 (-)
G176138 NA other downstream 200784 14069749 ~ 14072684 (-)
G176136 LOC108415819 other downstream 207324 14063500 ~ 14066144 (-)
G176146 LOC108415819 other downstream 221507 14051562 ~ 14051961 (-)
tex14 NA other downstream 458958 13774803 ~ 13814510 (-)
LOC111195111 NA other downstream 524818 13746636 ~ 13748650 (-)
LOC103044788 wnt11,wnt11r,LOC107686210,LOC107589704,LOC107747044 other upstream 382908 14657270 ~ 14670670 (-)
LOC111194989 NA other upstream 1253934 15528296 ~ 15565463 (-)
stoml2 stoml2,LOC107686459,LOC107688641,LOC107569390,LOC106563216 other upstream 1506193 15780555 ~ 15790644 (-)
G177526 NA other upstream 3897487 18171849 ~ 18174525 (-)
G177568 NA other upstream 4123220 18397582 ~ 18403008 (-)

Expression


Co-expression Network